RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 STAG3L1P0CL83 205 aa13.11□□□□□ -0.31
SNF8-215ENST00000515572 AFMP43652 599 aa13.11□□□□□ -0.31
SNF8-215ENST00000515572 SARSP49591 514 aaKnown RBP13.11□□□□□ -0.31
SNF8-215ENST00000515572 UBE2HP62256 183 aa13.11□□□□□ -0.31
SNF8-215ENST00000515572 ASIC1P78348 528 aa13.11□□□□□ -0.31
SNF8-215ENST00000515572 DEFB103AP81534 67 aa13.11□□□□□ -0.31
SNF8-215ENST00000515572 PRPF4BQ13523 1007 aaKnown RBP13.11□□□□□ -0.31
SNF8-215ENST00000515572 AMHR2Q16671 573 aa13.11□□□□□ -0.31
SNF8-215ENST00000515572 KRBA2Q6ZNG9 492 aa13.11□□□□□ -0.31
SNF8-215ENST00000515572 RTN4RL1Q86UN2 441 aaPredicted RBP13.11□□□□□ -0.31
SNF8-215ENST00000515572 HERC6Q8IVU3 1022 aa13.11□□□□□ -0.31
SNF8-215ENST00000515572 MYOCDQ8IZQ8 938 aa13.11□□□□□ -0.31
SNF8-215ENST00000515572 TMEM161BQ8NDZ6 487 aa13.11□□□□□ -0.31
SNF8-215ENST00000515572 LINC01599Q8WXQ3 324 aa13.11□□□□□ -0.31
SNF8-215ENST00000515572 STAMQ92783 540 aa13.11□□□□□ -0.31
SNF8-215ENST00000515572 TOP1MTQ969P6 601 aa13.11□□□□□ -0.31
SNF8-215ENST00000515572 PAGE5Q96GU1 130 aa13.11□□□□□ -0.31
SNF8-215ENST00000515572 ST6GALNAC4Q9H4F1 302 aa13.11□□□□□ -0.31
SNF8-215ENST00000515572 OLFML3Q9NRN5 406 aa13.11□□□□□ -0.31
SNF8-215ENST00000515572 PANK4Q9NVE7 773 aa13.11□□□□□ -0.31
SNF8-215ENST00000515572 A0A0U1RQF3 1178 aa13.1□□□□□ -0.31
SNF8-215ENST00000515572 PVALEFA0A1B0GWK0 134 aa13.1□□□□□ -0.31
SNF8-215ENST00000515572 K7ENM7 598 aa13.1□□□□□ -0.31
SNF8-215ENST00000515572 PRPF40AO75400 957 aaKnown RBP13.1□□□□□ -0.31
SNF8-215ENST00000515572 ARF4P18085 180 aaPredicted RBP13.1□□□□□ -0.31
SNF8-215ENST00000515572 HOXA11P31270 313 aaPredicted RBP13.1□□□□□ -0.31
SNF8-215ENST00000515572 RAB27AP51159 221 aa13.1□□□□□ -0.31
SNF8-215ENST00000515572 SMAD3P84022 425 aaKnown RBP13.1□□□□□ -0.31
SNF8-215ENST00000515572 STRN3Q13033 797 aa13.1□□□□□ -0.31
SNF8-215ENST00000515572 TWF2Q6IBS0 349 aaKnown RBP13.1□□□□□ -0.31
SNF8-215ENST00000515572 HAUS6Q7Z4H7 955 aa13.1□□□□□ -0.31
SNF8-215ENST00000515572 APBB1IPQ7Z5R6 666 aaPredicted RBP13.1□□□□□ -0.31
SNF8-215ENST00000515572 SFR1Q86XK3 245 aa13.1□□□□□ -0.31
SNF8-215ENST00000515572 NPAS4Q8IUM7 802 aa13.1□□□□□ -0.31
SNF8-215ENST00000515572 ENGASEQ8NFI3 743 aa13.1□□□□□ -0.31
SNF8-215ENST00000515572 HVCN1Q96D96 273 aa13.1□□□□□ -0.31
SNF8-215ENST00000515572 TIGD1Q96MW7 591 aa13.1□□□□□ -0.31
SNF8-215ENST00000515572 MRPL4Q9BYD3 311 aaKnown RBP13.1□□□□□ -0.31
SNF8-215ENST00000515572 ELAC1Q9H777 363 aaKnown RBP13.1□□□□□ -0.31
SNF8-215ENST00000515572 HOOK1Q9UJC3 728 aaKnown RBP13.1□□□□□ -0.31
SNF8-215ENST00000515572 A0A1B0GUA9 196 aa13.09□□□□□ -0.31
SNF8-215ENST00000515572 GOLGA6L22H0YM25 854 aa13.09□□□□□ -0.31
SNF8-215ENST00000515572 N4BP3O15049 544 aa13.09□□□□□ -0.31
SNF8-215ENST00000515572 B4GALT5O43286 388 aa13.09□□□□□ -0.31
SNF8-215ENST00000515572 GTPBP6O43824 516 aaPredicted RBP13.09□□□□□ -0.31
SNF8-215ENST00000515572 GADD45BO75293 160 aaPredicted RBP13.09□□□□□ -0.31
SNF8-215ENST00000515572 GJB5O95377 273 aa13.09□□□□□ -0.31
SNF8-215ENST00000515572 EOMESO95936 686 aa13.09□□□□□ -0.31
SNF8-215ENST00000515572 LIG1P18858 919 aa13.09□□□□□ -0.31
SNF8-215ENST00000515572 FAM189BP81408 668 aa13.09□□□□□ -0.31
SNF8-215ENST00000515572 SNW1Q13573 536 aaKnown RBP13.09□□□□□ -0.31
SNF8-215ENST00000515572 ALCAMQ13740 583 aa13.09□□□□□ -0.31
SNF8-215ENST00000515572 TMEM132AQ24JP5 1023 aa13.09□□□□□ -0.31
SNF8-215ENST00000515572 HERC4Q5GLZ8 1057 aaPredicted RBP13.09□□□□□ -0.31
SNF8-215ENST00000515572 SLC27A1Q6PCB7 646 aa13.09□□□□□ -0.31
SNF8-215ENST00000515572 STXBP4Q6ZWJ1 553 aa13.09□□□□□ -0.31
SNF8-215ENST00000515572 UNC13DQ70J99 1090 aa13.09□□□□□ -0.31
SNF8-215ENST00000515572 ECHDC2Q86YB7 292 aa13.09□□□□□ -0.31
SNF8-215ENST00000515572 CRIPAKQ8N1N5 446 aa13.09□□□□□ -0.31
SNF8-215ENST00000515572 RSPH1Q8WYR4 309 aa13.09□□□□□ -0.31
SNF8-215ENST00000515572 FIZ1Q96SL8 496 aa13.09□□□□□ -0.31
SNF8-215ENST00000515572 ZBED2Q9BTP6 218 aa13.09□□□□□ -0.31
SNF8-215ENST00000515572 MRPL44Q9H9J2 332 aaKnown RBP13.09□□□□□ -0.31
SNF8-215ENST00000515572 TMEM161AQ9NX61 479 aa13.09□□□□□ -0.31
SNF8-215ENST00000515572 LRFN2Q9ULH4 789 aa13.09□□□□□ -0.31
SNF8-215ENST00000515572 INSL6Q9Y581 213 aa13.09□□□□□ -0.31
SNF8-215ENST00000515572 PCDHB7Q9Y5E2 793 aa13.09□□□□□ -0.31
SNF8-215ENST00000515572 PCDHA11Q9Y5I1 949 aa13.09□□□□□ -0.31
SNF8-215ENST00000515572 COL4A6Q14031 1691 aa13.08□□□□□ -0.31
SNF8-215ENST00000515572 HOXA2O43364 376 aa13.08□□□□□ -0.32
SNF8-215ENST00000515572 KINO60870 393 aaKnown RBP13.08□□□□□ -0.32
SNF8-215ENST00000515572 ZNF623O75123 536 aa13.08□□□□□ -0.32
SNF8-215ENST00000515572 GTF2BQ00403 316 aa13.08□□□□□ -0.32
SNF8-215ENST00000515572 COASYQ13057 564 aa13.08□□□□□ -0.32
SNF8-215ENST00000515572 CUL4BQ13620 913 aa13.08□□□□□ -0.32
SNF8-215ENST00000515572 RAB30Q15771 203 aa13.08□□□□□ -0.32
SNF8-215ENST00000515572 ATF7IP2Q5U623 682 aa13.08□□□□□ -0.32
SNF8-215ENST00000515572 ZPBP2Q6X784 338 aa13.08□□□□□ -0.32
SNF8-215ENST00000515572 ZNF720Q7Z2F6 126 aa13.08□□□□□ -0.32
SNF8-215ENST00000515572 ELOA2Q8IYF1 753 aaPredicted RBP13.08□□□□□ -0.32
SNF8-215ENST00000515572 GRAMD1CQ8IYS0 662 aa13.08□□□□□ -0.32
SNF8-215ENST00000515572 HACE1Q8IYU2 909 aa13.08□□□□□ -0.32
SNF8-215ENST00000515572 CCDC47Q96A33 483 aaKnown RBP13.08□□□□□ -0.32
SNF8-215ENST00000515572 PGBD4Q96DM1 585 aa13.08□□□□□ -0.32
SNF8-215ENST00000515572 CPB2Q96IY4 423 aa13.08□□□□□ -0.32
SNF8-215ENST00000515572 RAD9AQ99638 391 aa13.08□□□□□ -0.32
SNF8-215ENST00000515572 ADPGKQ9BRR6 497 aa13.08□□□□□ -0.32
SNF8-215ENST00000515572 BLZF1Q9H2G9 400 aa13.08□□□□□ -0.32
SNF8-215ENST00000515572 FAM105AQ9NUU6 356 aa13.08□□□□□ -0.32
SNF8-215ENST00000515572 TBX20Q9UMR3 447 aa13.08□□□□□ -0.32
SNF8-215ENST00000515572 TNFSF13BQ9Y275 285 aa13.08□□□□□ -0.32
SNF8-215ENST00000515572 FNDC1Q4ZHG4 1894 aaPredicted RBP13.08□□□□□ -0.32
SNF8-215ENST00000515572 RBAK-RBAKDNI3L0D1 243 aa13.07□□□□□ -0.32
SNF8-215ENST00000515572 TLL1O43897 1013 aa13.07□□□□□ -0.32
SNF8-215ENST00000515572 NR1I2O75469 434 aa13.07□□□□□ -0.32
SNF8-215ENST00000515572 PPP1R37O75864 691 aa13.07□□□□□ -0.32
SNF8-215ENST00000515572 UPP2O95045 317 aa13.07□□□□□ -0.32
SNF8-215ENST00000515572 PIGRP01833 764 aa13.07□□□□□ -0.32
SNF8-215ENST00000515572 NMT1P30419 496 aaKnown RBP13.07□□□□□ -0.32
SNF8-215ENST00000515572 HTRA4P83105 476 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms