RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 HOXA11P31270 313 aaPredicted RBP15.18■□□□□ 0.02
TCOF1-215ENST00000515516 ARL2P36404 184 aa15.18■□□□□ 0.02
TCOF1-215ENST00000515516 MRPL10Q7Z7H8 261 aaKnown RBP15.18■□□□□ 0.02
TCOF1-215ENST00000515516 CATSPER3Q86XQ3 398 aa15.18■□□□□ 0.02
TCOF1-215ENST00000515516 SMRP1Q8NCR6 262 aa15.18■□□□□ 0.02
TCOF1-215ENST00000515516 MCPH1Q8NEM0 835 aa15.18■□□□□ 0.02
TCOF1-215ENST00000515516 POLR3CQ9BUI4 534 aaPredicted RBP15.18■□□□□ 0.02
TCOF1-215ENST00000515516 TRIM6Q9C030 488 aaPredicted RBP15.18■□□□□ 0.02
TCOF1-215ENST00000515516 POLR3FQ9H1D9 316 aaPredicted RBP15.18■□□□□ 0.02
TCOF1-215ENST00000515516 STK39Q9UEW8 545 aa15.18■□□□□ 0.02
TCOF1-215ENST00000515516 DBR1Q9UK59 544 aaKnown RBP15.18■□□□□ 0.02
TCOF1-215ENST00000515516 REV3LO60673 3130 aa15.17■□□□□ 0.02
TCOF1-215ENST00000515516 A0A087WWV3 80 aa15.17■□□□□ 0.02
TCOF1-215ENST00000515516 C19orf67A6NJJ6 358 aa15.17■□□□□ 0.02
TCOF1-215ENST00000515516 HIDE1A8MVS5 230 aa15.17■□□□□ 0.02
TCOF1-215ENST00000515516 DCXO43602 365 aa15.17■□□□□ 0.02
TCOF1-215ENST00000515516 GLP2RO95838 553 aa15.17■□□□□ 0.02
TCOF1-215ENST00000515516 ALDH2P05091 517 aa15.17■□□□□ 0.02
TCOF1-215ENST00000515516 SPATA31C1P0DKV0 1188 aa15.17■□□□□ 0.02
TCOF1-215ENST00000515516 NCLP19338 710 aaKnown RBP15.17■□□□□ 0.02
TCOF1-215ENST00000515516 GIT2Q14161 759 aa15.17■□□□□ 0.02
TCOF1-215ENST00000515516 HAUS3Q68CZ6 603 aa15.17■□□□□ 0.02
TCOF1-215ENST00000515516 LLGL2Q6P1M3 1020 aa15.17■□□□□ 0.02
TCOF1-215ENST00000515516 MAEAQ7L5Y9 396 aa15.17■□□□□ 0.02
TCOF1-215ENST00000515516 VPS52Q8N1B4 723 aa15.17■□□□□ 0.02
TCOF1-215ENST00000515516 MRPL43Q8N983 215 aaKnown RBP15.17■□□□□ 0.02
TCOF1-215ENST00000515516 ASAP3Q8TDY4 903 aa15.17■□□□□ 0.02
TCOF1-215ENST00000515516 KHSRPQ92945 711 aaKnown RBP eCLIP15.17■□□□□ 0.02
TCOF1-215ENST00000515516 RAB34Q9BZG1 259 aa15.17■□□□□ 0.02
TCOF1-215ENST00000515516 NRDE2Q9H7Z3 1164 aa15.17■□□□□ 0.02
TCOF1-215ENST00000515516 STK24Q9Y6E0 443 aa15.17■□□□□ 0.02
TCOF1-215ENST00000515516 LOXHD1Q8IVV2 1947 aa15.16■□□□□ 0.02
TCOF1-215ENST00000515516 ARHGEF35A5YM69 484 aa15.16■□□□□ 0.02
TCOF1-215ENST00000515516 LRRIQ4A6NIV6 560 aa15.16■□□□□ 0.02
TCOF1-215ENST00000515516 MEIS3P2A8K0S8 358 aa15.16■□□□□ 0.02
TCOF1-215ENST00000515516 TSPAN1O60635 241 aa15.16■□□□□ 0.02
TCOF1-215ENST00000515516 GPR37L1O60883 481 aa15.16■□□□□ 0.02
TCOF1-215ENST00000515516 MED24O75448 989 aa15.16■□□□□ 0.02
TCOF1-215ENST00000515516 GALTP07902 379 aa15.16■□□□□ 0.02
TCOF1-215ENST00000515516 GLRA2P23416 452 aa15.16■□□□□ 0.02
TCOF1-215ENST00000515516 RPA1P27694 616 aa15.16■□□□□ 0.02
TCOF1-215ENST00000515516 MBTD1Q05BQ5 628 aa15.16■□□□□ 0.02
TCOF1-215ENST00000515516 CAPSQ13938 189 aa15.16■□□□□ 0.02
TCOF1-215ENST00000515516 UBXN11Q5T124 520 aa15.16■□□□□ 0.02
TCOF1-215ENST00000515516 TMEM184AQ6ZMB5 413 aa15.16■□□□□ 0.02
TCOF1-215ENST00000515516 AGMOQ6ZNB7 445 aa15.16■□□□□ 0.02
TCOF1-215ENST00000515516 DDX53Q86TM3 631 aaKnown RBP15.16■□□□□ 0.02
TCOF1-215ENST00000515516 IFNLR1Q8IU57 520 aaPredicted RBP15.16■□□□□ 0.02
TCOF1-215ENST00000515516 ZBTB8OSQ8IWT0 167 aa15.16■□□□□ 0.02
TCOF1-215ENST00000515516 CASP10Q92851 521 aa15.16■□□□□ 0.02
TCOF1-215ENST00000515516 IGSF21Q96ID5 467 aa15.16■□□□□ 0.02
TCOF1-215ENST00000515516 CPB2Q96IY4 423 aa15.16■□□□□ 0.02
TCOF1-215ENST00000515516 LRFN3Q9BTN0 628 aa15.16■□□□□ 0.02
TCOF1-215ENST00000515516 NFKBIZQ9BYH8 718 aa15.16■□□□□ 0.02
TCOF1-215ENST00000515516 CSRNP2Q9H175 543 aa15.16■□□□□ 0.02
TCOF1-215ENST00000515516 FAN1Q9Y2M0 1017 aa15.16■□□□□ 0.02
TCOF1-215ENST00000515516 USP15Q9Y4E8 981 aaPredicted RBP15.16■□□□□ 0.02
TCOF1-215ENST00000515516 FAM86C2PA6NEL3 165 aa15.15■□□□□ 0.02
TCOF1-215ENST00000515516 C2orf71A6NGG8 1288 aa15.15■□□□□ 0.02
TCOF1-215ENST00000515516 NR1I2O75469 434 aa15.15■□□□□ 0.02
TCOF1-215ENST00000515516 POMCP01189 267 aa15.15■□□□□ 0.02
TCOF1-215ENST00000515516 HOXB8P17481 243 aaPredicted RBP15.15■□□□□ 0.02
TCOF1-215ENST00000515516 MUTP22033 750 aa15.15■□□□□ 0.02
TCOF1-215ENST00000515516 CCT6AP40227 531 aaKnown RBP15.15■□□□□ 0.02
TCOF1-215ENST00000515516 SLC11A1P49279 550 aa15.15■□□□□ 0.02
TCOF1-215ENST00000515516 TMEM132AQ24JP5 1023 aa15.15■□□□□ 0.02
TCOF1-215ENST00000515516 TPRNQ4KMQ1 711 aa15.15■□□□□ 0.02
TCOF1-215ENST00000515516 MCTP1Q6DN14 999 aa15.15■□□□□ 0.02
TCOF1-215ENST00000515516 ANKRD54Q6NXT1 300 aa15.15■□□□□ 0.02
TCOF1-215ENST00000515516 POTEGQ6S5H5 508 aa15.15■□□□□ 0.02
TCOF1-215ENST00000515516 VN1R2Q8NFZ6 395 aa15.15■□□□□ 0.02
TCOF1-215ENST00000515516 TMEM175Q9BSA9 504 aa15.15■□□□□ 0.02
TCOF1-215ENST00000515516 EIF2AQ9BY44 585 aaKnown RBP15.15■□□□□ 0.02
TCOF1-215ENST00000515516 LRWD1Q9UFC0 647 aa15.15■□□□□ 0.02
TCOF1-215ENST00000515516 HCN4Q9Y3Q4 1203 aa15.15■□□□□ 0.02
TCOF1-215ENST00000515516 IPPQ9Y573 584 aa15.15■□□□□ 0.02
TCOF1-215ENST00000515516 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.14■□□□□ 0.01
TCOF1-215ENST00000515516 CTSAP10619 480 aa15.14■□□□□ 0.01
TCOF1-215ENST00000515516 U2AF2P26368 475 aaKnown RBP eCLIP15.14■□□□□ 0.01
TCOF1-215ENST00000515516 FXR2P51116 673 aaKnown RBP eCLIP15.14■□□□□ 0.013e-7■■■■□ 23.3
TCOF1-215ENST00000515516 RBM10P98175 930 aaKnown RBP15.14■□□□□ 0.01
TCOF1-215ENST00000515516 CES5AQ6NT32 575 aa15.14■□□□□ 0.01
TCOF1-215ENST00000515516 PADI6Q6TGC4 694 aa15.14■□□□□ 0.01
TCOF1-215ENST00000515516 ZNF280BQ86YH2 543 aa15.14■□□□□ 0.01
TCOF1-215ENST00000515516 SMG8Q8ND04 991 aaKnown RBP15.14■□□□□ 0.01
TCOF1-215ENST00000515516 APOL6Q9BWW8 343 aa15.14■□□□□ 0.01
TCOF1-215ENST00000515516 PHF7Q9BWX1 381 aaPredicted RBP15.14■□□□□ 0.01
TCOF1-215ENST00000515516 C2orf40Q9H1Z8 148 aa15.14■□□□□ 0.01
TCOF1-215ENST00000515516 GPRC5CQ9NQ84 441 aa15.14■□□□□ 0.01
TCOF1-215ENST00000515516 PRMT7Q9NVM4 692 aaPredicted RBP15.14■□□□□ 0.01
TCOF1-215ENST00000515516 DNAJB4Q9UDY4 337 aa15.14■□□□□ 0.01
TCOF1-215ENST00000515516 BDP1A6H8Y1 2624 aa15.14■□□□□ 0.01
TCOF1-215ENST00000515516 MUC3AQ02505 3323 aa15.13■□□□□ 0.01
TCOF1-215ENST00000515516 ARL5CA6NH57 179 aa15.13■□□□□ 0.01
TCOF1-215ENST00000515516 H3BQV1 296 aa15.13■□□□□ 0.01
TCOF1-215ENST00000515516 LAD1O00515 517 aa15.13■□□□□ 0.01
TCOF1-215ENST00000515516 CLASP2O75122 1294 aaKnown RBP15.13■□□□□ 0.01
TCOF1-215ENST00000515516 DDHD2O94830 711 aa15.13■□□□□ 0.01
TCOF1-215ENST00000515516 ARF4P18085 180 aaPredicted RBP15.13■□□□□ 0.01
TCOF1-215ENST00000515516 CYP11B2P19099 503 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms