RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 NLRP4Q96MN2 994 aa9.99□□□□□ -0.81
CPNE4-213ENST00000515418 POP1Q99575 1024 aaKnown RBP9.99□□□□□ -0.81
CPNE4-213ENST00000515418 NUP58Q9BVL2 599 aa9.99□□□□□ -0.81
CPNE4-213ENST00000515418 TARS2Q9BW92 718 aaKnown RBP9.99□□□□□ -0.81
CPNE4-213ENST00000515418 LSM14BQ9BX40 385 aaKnown RBP9.99□□□□□ -0.81
CPNE4-213ENST00000515418 HAPLN2Q9GZV7 340 aa9.99□□□□□ -0.81
CPNE4-213ENST00000515418 ZNF215Q9UL58 517 aaPredicted RBP9.99□□□□□ -0.81
CPNE4-213ENST00000515418 LRRN2O75325 713 aa9.99□□□□□ -0.81
CPNE4-213ENST00000515418 VTNP04004 478 aa9.99□□□□□ -0.81
CPNE4-213ENST00000515418 LIG4P49917 911 aa9.99□□□□□ -0.81
CPNE4-213ENST00000515418 POLR2FP61218 127 aaKnown RBP9.99□□□□□ -0.81
CPNE4-213ENST00000515418 BFSP1Q12934 665 aa9.99□□□□□ -0.81
CPNE4-213ENST00000515418 TRIM14Q14142 442 aa9.99□□□□□ -0.81
CPNE4-213ENST00000515418 MYBPC2Q14324 1141 aa9.99□□□□□ -0.81
CPNE4-213ENST00000515418 MXD4Q14582 209 aaPredicted RBP9.99□□□□□ -0.81
CPNE4-213ENST00000515418 SNRNP35Q16560 246 aaKnown RBP9.99□□□□□ -0.81
CPNE4-213ENST00000515418 KIAA0753Q2KHM9 967 aa9.99□□□□□ -0.81
CPNE4-213ENST00000515418 CBWD6Q4V339 395 aa9.99□□□□□ -0.81
CPNE4-213ENST00000515418 SEZ6Q53EL9 994 aa9.99□□□□□ -0.81
CPNE4-213ENST00000515418 CBWD3Q5JTY5 395 aa9.99□□□□□ -0.81
CPNE4-213ENST00000515418 CBWD5Q5RIA9 395 aa9.99□□□□□ -0.81
CPNE4-213ENST00000515418 WDR59Q6PJI9 974 aa9.99□□□□□ -0.81
CPNE4-213ENST00000515418 MTHFD1LQ6UB35 978 aa9.99□□□□□ -0.81
CPNE4-213ENST00000515418 C12orf56Q8IXR9 622 aa9.99□□□□□ -0.81
CPNE4-213ENST00000515418 CCDC112Q8NEF3 446 aa9.99□□□□□ -0.81
CPNE4-213ENST00000515418 NEK11Q8NG66 645 aa9.99□□□□□ -0.81
CPNE4-213ENST00000515418 TCP11Q8WWU5 503 aa9.99□□□□□ -0.81
CPNE4-213ENST00000515418 CCDC127Q96BQ5 260 aa9.99□□□□□ -0.81
CPNE4-213ENST00000515418 HVCN1Q96D96 273 aa9.99□□□□□ -0.81
CPNE4-213ENST00000515418 FAM84AQ96KN4 292 aa9.99□□□□□ -0.81
CPNE4-213ENST00000515418 DNAJC7Q99615 494 aa9.99□□□□□ -0.81
CPNE4-213ENST00000515418 DESI2Q9BSY9 194 aa9.99□□□□□ -0.81
CPNE4-213ENST00000515418 MKNK1Q9BUB5 465 aa9.99□□□□□ -0.81
CPNE4-213ENST00000515418 MINDY3Q9H8M7 445 aa9.99□□□□□ -0.81
CPNE4-213ENST00000515418 SPTLC3Q9NUV7 552 aa9.99□□□□□ -0.81
CPNE4-213ENST00000515418 CGNQ9P2M7 1197 aaKnown RBP9.99□□□□□ -0.81
CPNE4-213ENST00000515418 MYADML2A6NDP7 307 aa9.98□□□□□ -0.81
CPNE4-213ENST00000515418 MYL3P08590 195 aa9.98□□□□□ -0.81
CPNE4-213ENST00000515418 IQCF3P0C7M6 154 aa9.98□□□□□ -0.81
CPNE4-213ENST00000515418 PON1P27169 355 aa9.98□□□□□ -0.81
CPNE4-213ENST00000515418 FMO5P49326 533 aa9.98□□□□□ -0.81
CPNE4-213ENST00000515418 ACOT2P49753 483 aa9.98□□□□□ -0.81
CPNE4-213ENST00000515418 ZBED6P86452 979 aa9.98□□□□□ -0.81
CPNE4-213ENST00000515418 PPP3CAQ08209 521 aa9.98□□□□□ -0.81
CPNE4-213ENST00000515418 PPFIA1Q13136 1202 aa9.98□□□□□ -0.81
CPNE4-213ENST00000515418 HIC1Q14526 733 aa9.98□□□□□ -0.81
CPNE4-213ENST00000515418 GRIK4Q16099 956 aa9.98□□□□□ -0.81
CPNE4-213ENST00000515418 EXOC3L4Q17RC7 722 aa9.98□□□□□ -0.81
CPNE4-213ENST00000515418 C1orf220Q5T0J3 134 aa9.98□□□□□ -0.81
CPNE4-213ENST00000515418 DPY19L2P1Q6NXN4 242 aa9.98□□□□□ -0.81
CPNE4-213ENST00000515418 RRAGAQ7L523 313 aa9.98□□□□□ -0.81
CPNE4-213ENST00000515418 CCAR2Q8N163 923 aaKnown RBP9.98□□□□□ -0.81
CPNE4-213ENST00000515418 RETREG2Q8NC44 543 aa9.98□□□□□ -0.81
CPNE4-213ENST00000515418 CD99L2Q8TCZ2 262 aa9.98□□□□□ -0.81
CPNE4-213ENST00000515418 FAM213AQ9BRX8 229 aa9.98□□□□□ -0.81
CPNE4-213ENST00000515418 AP5M1Q9H0R1 490 aa9.98□□□□□ -0.81
CPNE4-213ENST00000515418 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.98□□□□□ -0.81
CPNE4-213ENST00000515418 KCNG1Q9UIX4 513 aa9.98□□□□□ -0.81
CPNE4-213ENST00000515418 PPME1Q9Y570 386 aa9.98□□□□□ -0.81
CPNE4-213ENST00000515418 A0A0U1RQJ8 604 aa9.97□□□□□ -0.81
CPNE4-213ENST00000515418 H0YCG3 227 aa9.97□□□□□ -0.81
CPNE4-213ENST00000515418 ARHGAP6O43182 974 aa9.97□□□□□ -0.81
CPNE4-213ENST00000515418 NRDCO43847 1150 aa9.97□□□□□ -0.81
CPNE4-213ENST00000515418 MSCO60682 206 aa9.97□□□□□ -0.81
CPNE4-213ENST00000515418 PGK1P00558 417 aa9.97□□□□□ -0.81
CPNE4-213ENST00000515418 KRT13P13646 458 aa9.97□□□□□ -0.81
CPNE4-213ENST00000515418 MATR3P43243 847 aaKnown RBP eCLIP9.97□□□□□ -0.81
CPNE4-213ENST00000515418 GCLMP48507 274 aa9.97□□□□□ -0.81
CPNE4-213ENST00000515418 VAMP7P51809 220 aa9.97□□□□□ -0.81
CPNE4-213ENST00000515418 SNRPFP62306 86 aaKnown RBP9.97□□□□□ -0.81
CPNE4-213ENST00000515418 ZNF200P98182 395 aaPredicted RBP9.97□□□□□ -0.81
CPNE4-213ENST00000515418 CACNB2Q08289 660 aaPredicted RBP9.97□□□□□ -0.81
CPNE4-213ENST00000515418 TMEM62Q0P6H9 643 aa9.97□□□□□ -0.81
CPNE4-213ENST00000515418 FIGNQ5HY92 759 aa9.97□□□□□ -0.81
CPNE4-213ENST00000515418 ZBTB41Q5SVQ8 909 aa9.97□□□□□ -0.81
CPNE4-213ENST00000515418 GJB7Q6PEY0 223 aa9.97□□□□□ -0.81
CPNE4-213ENST00000515418 ZBTB33Q86T24 672 aa9.97□□□□□ -0.81
CPNE4-213ENST00000515418 CDR2LQ86X02 465 aaPredicted RBP9.97□□□□□ -0.81
CPNE4-213ENST00000515418 EXOC8Q8IYI6 725 aa9.97□□□□□ -0.81
CPNE4-213ENST00000515418 TMEM174Q8WUU8 243 aa9.97□□□□□ -0.81
CPNE4-213ENST00000515418 ATRIPQ8WXE1 791 aa9.97□□□□□ -0.81
CPNE4-213ENST00000515418 BAP1Q92560 729 aa9.97□□□□□ -0.81
CPNE4-213ENST00000515418 CCDC51Q96ER9 411 aa9.97□□□□□ -0.81
CPNE4-213ENST00000515418 TMEM134Q9H6X4 195 aa9.97□□□□□ -0.81
CPNE4-213ENST00000515418 IFT122Q9HBG6 1241 aa9.97□□□□□ -0.81
CPNE4-213ENST00000515418 ANKFY1Q9P2R3 1169 aa9.97□□□□□ -0.81
CPNE4-213ENST00000515418 AKT3Q9Y243 479 aa9.97□□□□□ -0.81
CPNE4-213ENST00000515418 A0A087WZ62 844 aa9.97□□□□□ -0.81
CPNE4-213ENST00000515418 A0A1W2PQJ5 194 aa9.97□□□□□ -0.81
CPNE4-213ENST00000515418 LRRC53A6NM62 1247 aa9.97□□□□□ -0.81
CPNE4-213ENST00000515418 INO80B-WBP1J3KQ70 363 aa9.97□□□□□ -0.81
CPNE4-213ENST00000515418 B4GALT5O43286 388 aa9.97□□□□□ -0.81
CPNE4-213ENST00000515418 GAS2O43903 313 aaKnown RBP9.97□□□□□ -0.81
CPNE4-213ENST00000515418 MYCNP04198 464 aaPredicted RBP9.97□□□□□ -0.81
CPNE4-213ENST00000515418 PLEKP08567 350 aaPredicted RBP9.97□□□□□ -0.81
CPNE4-213ENST00000515418 C6orf222P0C671 652 aaPredicted RBP9.97□□□□□ -0.81
CPNE4-213ENST00000515418 SMIM10L2AP0DMW4 78 aa9.97□□□□□ -0.81
CPNE4-213ENST00000515418 SMIM10L2BP0DMW5 78 aa9.97□□□□□ -0.81
CPNE4-213ENST00000515418 HARSP12081 509 aaKnown RBP9.97□□□□□ -0.81
CPNE4-213ENST00000515418 CYBAP13498 195 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms