RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 NPTXRO95502 500 aa12.73□□□□□ -0.37
VCAN-212ENST00000515397 POMCP01189 267 aa12.73□□□□□ -0.37
VCAN-212ENST00000515397 EDN1P05305 212 aa12.73□□□□□ -0.37
VCAN-212ENST00000515397 AKAP5P24588 427 aa12.73□□□□□ -0.37
VCAN-212ENST00000515397 PRPHP41219 470 aa12.73□□□□□ -0.37
VCAN-212ENST00000515397 BCAR1P56945 870 aa12.73□□□□□ -0.37
VCAN-212ENST00000515397 RBM10P98175 930 aaKnown RBP12.73□□□□□ -0.37
VCAN-212ENST00000515397 SF3A1Q15459 793 aaKnown RBP12.73□□□□□ -0.37
VCAN-212ENST00000515397 NOMO2Q5JPE7 1267 aa12.73□□□□□ -0.37
VCAN-212ENST00000515397 MRPL10Q7Z7H8 261 aaKnown RBP12.73□□□□□ -0.37
VCAN-212ENST00000515397 TMEM173Q86WV6 379 aaPredicted RBP12.73□□□□□ -0.37
VCAN-212ENST00000515397 LRRC43Q8N309 656 aa12.73□□□□□ -0.37
VCAN-212ENST00000515397 MCPH1Q8NEM0 835 aa12.73□□□□□ -0.37
VCAN-212ENST00000515397 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.73□□□□□ -0.37
VCAN-212ENST00000515397 ADAMTS19Q8TE59 1207 aa12.73□□□□□ -0.37
VCAN-212ENST00000515397 ZNF558Q96NG5 402 aa12.73□□□□□ -0.37
VCAN-212ENST00000515397 RAB34Q9BZG1 259 aa12.73□□□□□ -0.37
VCAN-212ENST00000515397 NRDE2Q9H7Z3 1164 aa12.73□□□□□ -0.37
VCAN-212ENST00000515397 AAASQ9NRG9 546 aa12.73□□□□□ -0.37
VCAN-212ENST00000515397 MIOSQ9NXC5 875 aa12.73□□□□□ -0.37
VCAN-212ENST00000515397 DNAJB4Q9UDY4 337 aa12.73□□□□□ -0.37
VCAN-212ENST00000515397 COG5Q9UP83 839 aa12.73□□□□□ -0.37
VCAN-212ENST00000515397 FNDC1Q4ZHG4 1894 aaPredicted RBP12.73□□□□□ -0.37
VCAN-212ENST00000515397 NLRC5Q86WI3 1866 aa12.73□□□□□ -0.37
VCAN-212ENST00000515397 DDHD2O94830 711 aa12.72□□□□□ -0.37
VCAN-212ENST00000515397 EYA4O95677 639 aa12.72□□□□□ -0.37
VCAN-212ENST00000515397 ITGA4P13612 1032 aa12.72□□□□□ -0.37
VCAN-212ENST00000515397 LAG3P18627 525 aa12.72□□□□□ -0.37
VCAN-212ENST00000515397 MARCKSP29966 332 aaPredicted RBP12.72□□□□□ -0.37
VCAN-212ENST00000515397 NRIP1P48552 1158 aa12.72□□□□□ -0.37
VCAN-212ENST00000515397 CACNB1Q02641 598 aaPredicted RBP12.72□□□□□ -0.37
VCAN-212ENST00000515397 RNASELQ05823 741 aaKnown RBP12.72□□□□□ -0.37
VCAN-212ENST00000515397 RESTQ13127 1097 aa12.72□□□□□ -0.37
VCAN-212ENST00000515397 DHX8Q14562 1220 aaKnown RBP12.72□□□□□ -0.37
VCAN-212ENST00000515397 NAALADL2Q58DX5 795 aa12.72□□□□□ -0.37
VCAN-212ENST00000515397 SPECC1Q5M775 1068 aa12.72□□□□□ -0.37
VCAN-212ENST00000515397 PLPP4Q5VZY2 271 aa12.72□□□□□ -0.37
VCAN-212ENST00000515397 GLB1LQ6UWU2 654 aa12.72□□□□□ -0.37
VCAN-212ENST00000515397 IFNLR1Q8IU57 520 aaPredicted RBP12.72□□□□□ -0.37
VCAN-212ENST00000515397 LRRC15Q8TF66 581 aa12.72□□□□□ -0.37
VCAN-212ENST00000515397 BCL7CQ8WUZ0 217 aaPredicted RBP12.72□□□□□ -0.37
VCAN-212ENST00000515397 TRAIPQ9BWF2 469 aa12.72□□□□□ -0.37
VCAN-212ENST00000515397 LMAN2LQ9H0V9 348 aa12.72□□□□□ -0.37
VCAN-212ENST00000515397 CSRNP2Q9H175 543 aa12.72□□□□□ -0.37
VCAN-212ENST00000515397 TBC1D13Q9NVG8 400 aa12.72□□□□□ -0.37
VCAN-212ENST00000515397 SPG21Q9NZD8 308 aa12.72□□□□□ -0.37
VCAN-212ENST00000515397 KLK14Q9P0G3 267 aa12.72□□□□□ -0.37
VCAN-212ENST00000515397 IPPQ9Y573 584 aa12.72□□□□□ -0.37
VCAN-212ENST00000515397 BDP1A6H8Y1 2624 aa12.71□□□□□ -0.37
VCAN-212ENST00000515397 HIDE1A8MVS5 230 aa12.71□□□□□ -0.37
VCAN-212ENST00000515397 HIP1RO75146 1068 aa12.71□□□□□ -0.37
VCAN-212ENST00000515397 SKIP12755 728 aa12.71□□□□□ -0.37
VCAN-212ENST00000515397 CA8P35219 290 aa12.71□□□□□ -0.37
VCAN-212ENST00000515397 LTBRP36941 435 aa12.71□□□□□ -0.37
VCAN-212ENST00000515397 SLC11A1P49279 550 aa12.71□□□□□ -0.37
VCAN-212ENST00000515397 ALDH7A1P49419 539 aaKnown RBP12.71□□□□□ -0.37
VCAN-212ENST00000515397 RAB27AP51159 221 aa12.71□□□□□ -0.37
VCAN-212ENST00000515397 PEX3P56589 373 aa12.71□□□□□ -0.37
VCAN-212ENST00000515397 POU5F1BQ06416 359 aa12.71□□□□□ -0.37
VCAN-212ENST00000515397 NCBP1Q09161 790 aaKnown RBP12.71□□□□□ -0.37
VCAN-212ENST00000515397 TMEM132AQ24JP5 1023 aa12.71□□□□□ -0.37
VCAN-212ENST00000515397 FOXD4L6Q3SYB3 417 aaPredicted RBP12.71□□□□□ -0.37
VCAN-212ENST00000515397 RINT1Q6NUQ1 792 aa12.71□□□□□ -0.37
VCAN-212ENST00000515397 NOTUMQ6P988 496 aa12.71□□□□□ -0.37
VCAN-212ENST00000515397 FOXD4L3Q6VB84 417 aaPredicted RBP12.71□□□□□ -0.37
VCAN-212ENST00000515397 FAM43BQ6ZT52 329 aaPredicted RBP12.71□□□□□ -0.37
VCAN-212ENST00000515397 USP49Q70CQ1 688 aa12.71□□□□□ -0.37
VCAN-212ENST00000515397 BRAPQ7Z569 592 aa12.71□□□□□ -0.37
VCAN-212ENST00000515397 CABP7Q86V35 215 aa12.71□□□□□ -0.37
VCAN-212ENST00000515397 ZBTB8OSQ8IWT0 167 aa12.71□□□□□ -0.37
VCAN-212ENST00000515397 DAW1Q8N136 415 aa12.71□□□□□ -0.37
VCAN-212ENST00000515397 SLC39A11Q8N1S5 342 aa12.71□□□□□ -0.37
VCAN-212ENST00000515397 DEPTORQ8TB45 409 aa12.71□□□□□ -0.37
VCAN-212ENST00000515397 AUTS2Q8WXX7 1259 aa12.71□□□□□ -0.37
VCAN-212ENST00000515397 RABGGTAQ92696 567 aa12.71□□□□□ -0.37
VCAN-212ENST00000515397 SYMPKQ92797 1274 aaKnown RBP12.71□□□□□ -0.37
VCAN-212ENST00000515397 PGBD4Q96DM1 585 aa12.71□□□□□ -0.37
VCAN-212ENST00000515397 ZFP42Q96MM3 310 aa12.71□□□□□ -0.37
VCAN-212ENST00000515397 UHRF1Q96T88 793 aaPredicted RBP12.71□□□□□ -0.37
VCAN-212ENST00000515397 GAD1Q99259 594 aa12.71□□□□□ -0.37
VCAN-212ENST00000515397 CXCL16Q9H2A7 254 aa12.71□□□□□ -0.37
VCAN-212ENST00000515397 FZD8Q9H461 694 aa12.71□□□□□ -0.37
VCAN-212ENST00000515397 NXF3Q9H4D5 531 aaKnown RBP12.71□□□□□ -0.37
VCAN-212ENST00000515397 RSAD1Q9HA92 442 aa12.71□□□□□ -0.37
VCAN-212ENST00000515397 TLR9Q9NR96 1032 aa12.71□□□□□ -0.37
VCAN-212ENST00000515397 MTMR6Q9Y217 621 aa12.71□□□□□ -0.37
VCAN-212ENST00000515397 ARID2Q68CP9 1835 aa12.71□□□□□ -0.38
VCAN-212ENST00000515397 KIAA1671Q9BY89 1806 aa12.7□□□□□ -0.38
VCAN-212ENST00000515397 CCDC169A6NNP5 214 aa12.7□□□□□ -0.38
VCAN-212ENST00000515397 F8W810 466 aa12.7□□□□□ -0.38
VCAN-212ENST00000515397 PRKCBP05771 671 aa12.7□□□□□ -0.38
VCAN-212ENST00000515397 GALTP07902 379 aa12.7□□□□□ -0.38
VCAN-212ENST00000515397 IL9P15248 144 aa12.7□□□□□ -0.38
VCAN-212ENST00000515397 NCLP19338 710 aaKnown RBP12.7□□□□□ -0.38
VCAN-212ENST00000515397 PDCP20941 246 aa12.7□□□□□ -0.38
VCAN-212ENST00000515397 MUTP22033 750 aa12.7□□□□□ -0.38
VCAN-212ENST00000515397 AXLP30530 894 aa12.7□□□□□ -0.38
VCAN-212ENST00000515397 MLH1P40692 756 aa12.7□□□□□ -0.38
VCAN-212ENST00000515397 AAK1Q2M2I8 961 aa12.7□□□□□ -0.38
VCAN-212ENST00000515397 EEF1DP3Q658K8 133 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms