RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 RRP1BQ14684 758 aaKnown RBP13.75□□□□□ -0.21
SMAD1-215ENST00000515385 PTPROQ16827 1216 aa13.75□□□□□ -0.21
SMAD1-215ENST00000515385 RASIP1Q5U651 963 aa13.75□□□□□ -0.21
SMAD1-215ENST00000515385 DCAF12L1Q5VU92 463 aa13.75□□□□□ -0.21
SMAD1-215ENST00000515385 C4orf50Q6ZRC1 276 aa13.75□□□□□ -0.21
SMAD1-215ENST00000515385 ANKRD35Q8N283 1001 aa13.75□□□□□ -0.21
SMAD1-215ENST00000515385 TTC8Q8TAM2 541 aa13.75□□□□□ -0.21
SMAD1-215ENST00000515385 GDAP1Q8TB36 358 aa13.75□□□□□ -0.21
SMAD1-215ENST00000515385 C7orf43Q8WVR3 580 aa13.75□□□□□ -0.21
SMAD1-215ENST00000515385 FAM163AQ96GL9 167 aaPredicted RBP13.75□□□□□ -0.21
SMAD1-215ENST00000515385 NLRP3Q96P20 1036 aa13.75□□□□□ -0.21
SMAD1-215ENST00000515385 AGAP3Q96P47 875 aa13.75□□□□□ -0.21
SMAD1-215ENST00000515385 OLFM3Q96PB7 478 aa13.75□□□□□ -0.21
SMAD1-215ENST00000515385 PNMA5Q96PV4 448 aa13.75□□□□□ -0.21
SMAD1-215ENST00000515385 HAPLN3Q96S86 360 aa13.75□□□□□ -0.21
SMAD1-215ENST00000515385 PPP1R12CQ9BZL4 782 aa13.75□□□□□ -0.21
SMAD1-215ENST00000515385 ZCWPW1Q9H0M4 648 aa13.75□□□□□ -0.21
SMAD1-215ENST00000515385 ERVK-5Q9HDB9 667 aa13.75□□□□□ -0.21
SMAD1-215ENST00000515385 BMP2KQ9NSY1 1161 aaPredicted RBP13.75□□□□□ -0.21
SMAD1-215ENST00000515385 DDX43Q9NXZ2 648 aaKnown RBP13.75□□□□□ -0.21
SMAD1-215ENST00000515385 ZNF212Q9UDV6 495 aa13.75□□□□□ -0.21
SMAD1-215ENST00000515385 CHKBQ9Y259 395 aa13.75□□□□□ -0.21
SMAD1-215ENST00000515385 LRP5O75197 1615 aa13.74□□□□□ -0.21
SMAD1-215ENST00000515385 H0Y3Z8 333 aa13.74□□□□□ -0.21
SMAD1-215ENST00000515385 MAP3K7O43318 606 aa13.74□□□□□ -0.21
SMAD1-215ENST00000515385 PDE8AO60658 829 aa13.74□□□□□ -0.21
SMAD1-215ENST00000515385 VCAM1P19320 739 aa13.74□□□□□ -0.21
SMAD1-215ENST00000515385 EPHB2P29323 1055 aa13.74□□□□□ -0.21
SMAD1-215ENST00000515385 GALCP54803 685 aa13.74□□□□□ -0.21
SMAD1-215ENST00000515385 COASYQ13057 564 aa13.74□□□□□ -0.21
SMAD1-215ENST00000515385 CALCOCO2Q13137 446 aa13.74□□□□□ -0.21
SMAD1-215ENST00000515385 LETM2Q2VYF4 491 aa13.74□□□□□ -0.21
SMAD1-215ENST00000515385 FAM26FQ5R3K3 315 aa13.74□□□□□ -0.21
SMAD1-215ENST00000515385 DPY19L2P1Q6NXN4 242 aa13.74□□□□□ -0.21
SMAD1-215ENST00000515385 FRMD5Q7Z6J6 570 aa13.74□□□□□ -0.21
SMAD1-215ENST00000515385 UBL4BQ8N7F7 174 aa13.74□□□□□ -0.21
SMAD1-215ENST00000515385 UHMK1Q8TAS1 419 aaKnown RBP13.74□□□□□ -0.21
SMAD1-215ENST00000515385 PPP1R14BQ96C90 147 aa13.74□□□□□ -0.21
SMAD1-215ENST00000515385 SPATA16Q9BXB7 569 aa13.74□□□□□ -0.21
SMAD1-215ENST00000515385 NT5C3AQ9H0P0 336 aa13.74□□□□□ -0.21
SMAD1-215ENST00000515385 KIF13BQ9NQT8 1826 aa13.74□□□□□ -0.21
SMAD1-215ENST00000515385 PCDH11YQ9BZA8 1340 aa13.74□□□□□ -0.21
SMAD1-215ENST00000515385 CCDC88AQ3V6T2 1871 aa13.73□□□□□ -0.21
SMAD1-215ENST00000515385 ERVV-2B6SEH9 535 aa13.73□□□□□ -0.21
SMAD1-215ENST00000515385 DDX3XO00571 662 aaKnown RBP eCLIP13.73□□□□□ -0.21
SMAD1-215ENST00000515385 ZWINTO95229 277 aa13.73□□□□□ -0.21
SMAD1-215ENST00000515385 LSAMPQ13449 338 aa13.73□□□□□ -0.21
SMAD1-215ENST00000515385 GIT2Q14161 759 aa13.73□□□□□ -0.21
SMAD1-215ENST00000515385 GRM4Q14833 912 aa13.73□□□□□ -0.21
SMAD1-215ENST00000515385 LRRC41Q15345 812 aa13.73□□□□□ -0.21
SMAD1-215ENST00000515385 CYP1B1Q16678 543 aa13.73□□□□□ -0.21
SMAD1-215ENST00000515385 LONRF1Q17RB8 773 aa13.73□□□□□ -0.21
SMAD1-215ENST00000515385 EXOC3L4Q17RC7 722 aa13.73□□□□□ -0.21
SMAD1-215ENST00000515385 CNPY1Q3B7I2 92 aa13.73□□□□□ -0.21
SMAD1-215ENST00000515385 DAB2IPQ5VWQ8 1189 aa13.73□□□□□ -0.21
SMAD1-215ENST00000515385 LRRC74BQ6ZQY2 392 aa13.73□□□□□ -0.21
SMAD1-215ENST00000515385 ZC3H18Q86VM9 953 aaKnown RBP13.73□□□□□ -0.21
SMAD1-215ENST00000515385 THEMISQ8N1K5 641 aaPredicted RBP13.73□□□□□ -0.21
SMAD1-215ENST00000515385 PHC3Q8NDX5 983 aa13.73□□□□□ -0.21
SMAD1-215ENST00000515385 SLC35G2Q8TBE7 412 aa13.73□□□□□ -0.21
SMAD1-215ENST00000515385 ZNF398Q8TD17 642 aa13.73□□□□□ -0.21
SMAD1-215ENST00000515385 U2AF1L4Q8WU68 220 aaKnown RBP13.73□□□□□ -0.21
SMAD1-215ENST00000515385 IWS1Q96ST2 819 aa13.73□□□□□ -0.21
SMAD1-215ENST00000515385 RIOK1Q9BRS2 568 aaKnown RBP13.73□□□□□ -0.21
SMAD1-215ENST00000515385 MMADHCQ9H3L0 296 aaPredicted RBP13.73□□□□□ -0.21
SMAD1-215ENST00000515385 WHRNQ9P202 907 aa13.73□□□□□ -0.21
SMAD1-215ENST00000515385 PPP1R9AQ9ULJ8 1098 aa13.73□□□□□ -0.21
SMAD1-215ENST00000515385 UBR2Q8IWV8 1755 aa13.73□□□□□ -0.21
SMAD1-215ENST00000515385 ENTPD5O75356 428 aa13.73□□□□□ -0.21
SMAD1-215ENST00000515385 T-ENOLP0DO92 83 aa13.73□□□□□ -0.21
SMAD1-215ENST00000515385 DESP17661 470 aa13.73□□□□□ -0.21
SMAD1-215ENST00000515385 GNA11P29992 359 aa13.73□□□□□ -0.21
SMAD1-215ENST00000515385 SLC18A1P54219 525 aa13.73□□□□□ -0.21
SMAD1-215ENST00000515385 HADHBP55084 474 aaKnown RBP13.73□□□□□ -0.21
SMAD1-215ENST00000515385 JAM2P57087 298 aa13.73□□□□□ -0.21
SMAD1-215ENST00000515385 USP4Q13107 963 aa13.73□□□□□ -0.21
SMAD1-215ENST00000515385 NR1H3Q13133 447 aa13.73□□□□□ -0.21
SMAD1-215ENST00000515385 MOGSQ13724 837 aa13.73□□□□□ -0.21
SMAD1-215ENST00000515385 TMEM119Q4V9L6 283 aa13.73□□□□□ -0.21
SMAD1-215ENST00000515385 SLC45A4Q5BKX6 768 aa13.73□□□□□ -0.21
SMAD1-215ENST00000515385 OTUD6AQ7L8S5 288 aa13.73□□□□□ -0.21
SMAD1-215ENST00000515385 DGKHQ86XP1 1220 aa13.73□□□□□ -0.21
SMAD1-215ENST00000515385 SLC30A5Q8TAD4 765 aa13.73□□□□□ -0.21
SMAD1-215ENST00000515385 CDC42EP4Q9H3Q1 356 aaKnown RBP13.73□□□□□ -0.21
SMAD1-215ENST00000515385 STX18Q9P2W9 335 aaKnown RBP13.73□□□□□ -0.21
SMAD1-215ENST00000515385 HDAC9Q9UKV0 1011 aa13.73□□□□□ -0.21
SMAD1-215ENST00000515385 MTUS1Q9ULD2 1270 aa13.73□□□□□ -0.21
SMAD1-215ENST00000515385 C10orf71Q711Q0 1435 aa13.72□□□□□ -0.21
SMAD1-215ENST00000515385 KCPQ6ZWJ8 1503 aa13.72□□□□□ -0.21
SMAD1-215ENST00000515385 IRS4O14654 1257 aaPredicted RBP13.72□□□□□ -0.21
SMAD1-215ENST00000515385 CCDC166P0CW27 439 aa13.72□□□□□ -0.21
SMAD1-215ENST00000515385 MCL1Q07820 350 aa13.72□□□□□ -0.21
SMAD1-215ENST00000515385 KRT79Q5XKE5 535 aa13.72□□□□□ -0.21
SMAD1-215ENST00000515385 CCDC137Q6PK04 289 aaKnown RBP13.72□□□□□ -0.21
SMAD1-215ENST00000515385 HEATR3Q7Z4Q2 680 aa13.72□□□□□ -0.21
SMAD1-215ENST00000515385 CCDC65Q8IXS2 484 aa13.72□□□□□ -0.21
SMAD1-215ENST00000515385 RIBC1Q8N443 379 aaPredicted RBP13.72□□□□□ -0.21
SMAD1-215ENST00000515385 PRELID2Q8N945 189 aa13.72□□□□□ -0.21
SMAD1-215ENST00000515385 C18orf8Q96DM3 657 aa13.72□□□□□ -0.21
SMAD1-215ENST00000515385 CCDC77Q9BR77 488 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms