RNA–Protein interactions for RNA: ENST00000515233.5

DDR1-278, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-278ENST00000515233 EPHA7Q15375 998 aa16.81■□□□□ 0.28
DDR1-278ENST00000515233 PTPN14Q15678 1187 aa16.81■□□□□ 0.28
DDR1-278ENST00000515233 NEK8Q86SG6 692 aa16.81■□□□□ 0.28
DDR1-278ENST00000515233 GPR149Q86SP6 731 aa16.81■□□□□ 0.28
DDR1-278ENST00000515233 CABP7Q86V35 215 aa16.81■□□□□ 0.28
DDR1-278ENST00000515233 URGCPQ8TCY9 931 aa16.81■□□□□ 0.28
DDR1-278ENST00000515233 PSPC1Q8WXF1 523 aaKnown RBP16.81■□□□□ 0.28
DDR1-278ENST00000515233 ATOH1Q92858 354 aaPredicted RBP16.81■□□□□ 0.28
DDR1-278ENST00000515233 CEP170P1Q96L14 293 aa16.81■□□□□ 0.28
DDR1-278ENST00000515233 KLHL5Q96PQ7 755 aa16.81■□□□□ 0.28
DDR1-278ENST00000515233 TMEM175Q9BSA9 504 aa16.81■□□□□ 0.28
DDR1-278ENST00000515233 EMILIN2Q9BXX0 1053 aa16.81■□□□□ 0.28
DDR1-278ENST00000515233 GBP3Q9H0R5 595 aa16.81■□□□□ 0.28
DDR1-278ENST00000515233 SLKQ9H2G2 1235 aaPredicted RBP16.81■□□□□ 0.28
DDR1-278ENST00000515233 RSAD1Q9HA92 442 aa16.81■□□□□ 0.28
DDR1-278ENST00000515233 WRAP73Q9P2S5 460 aaPredicted RBP16.81■□□□□ 0.28
DDR1-278ENST00000515233 LIMD1Q9UGP4 676 aa16.81■□□□□ 0.28
DDR1-278ENST00000515233 CCDC194A0A1B0GVG4 234 aa16.8■□□□□ 0.28
DDR1-278ENST00000515233 GALR2O43603 387 aaPredicted RBP16.8■□□□□ 0.28
DDR1-278ENST00000515233 B4GALT3O60512 393 aa16.8■□□□□ 0.28
DDR1-278ENST00000515233 NCLP19338 710 aaKnown RBP16.8■□□□□ 0.28
DDR1-278ENST00000515233 CLCN4P51793 760 aa16.8■□□□□ 0.28
DDR1-278ENST00000515233 AFF1P51825 1210 aaKnown RBP16.8■□□□□ 0.28
DDR1-278ENST00000515233 LAMTOR4Q0VGL1 99 aa16.8■□□□□ 0.28
DDR1-278ENST00000515233 STK3Q13188 491 aa16.8■□□□□ 0.28
DDR1-278ENST00000515233 UBXN11Q5T124 520 aa16.8■□□□□ 0.28
DDR1-278ENST00000515233 TMC5Q6UXY8 1006 aa16.8■□□□□ 0.28
DDR1-278ENST00000515233 OTUD6AQ7L8S5 288 aa16.8■□□□□ 0.28
DDR1-278ENST00000515233 CNNM3Q8NE01 707 aa16.8■□□□□ 0.28
DDR1-278ENST00000515233 TCP11Q8WWU5 503 aa16.8■□□□□ 0.28
DDR1-278ENST00000515233 HAS1Q92839 578 aa16.8■□□□□ 0.28
DDR1-278ENST00000515233 TMEM143Q96AN5 459 aa16.8■□□□□ 0.28
DDR1-278ENST00000515233 NAP1L4Q99733 375 aaKnown RBP16.8■□□□□ 0.28
DDR1-278ENST00000515233 LARP6Q9BRS8 491 aaKnown RBP16.8■□□□□ 0.28
DDR1-278ENST00000515233 MINDY3Q9H8M7 445 aa16.8■□□□□ 0.28
DDR1-278ENST00000515233 SFXN1Q9H9B4 322 aa16.8■□□□□ 0.28
DDR1-278ENST00000515233 UBN1Q9NPG3 1134 aa16.8■□□□□ 0.28
DDR1-278ENST00000515233 KCNJ14Q9UNX9 436 aa16.8■□□□□ 0.28
DDR1-278ENST00000515233 FAN1Q9Y2M0 1017 aa16.8■□□□□ 0.28
DDR1-278ENST00000515233 DENND4AQ7Z401 1863 aa16.8■□□□□ 0.28
DDR1-278ENST00000515233 PROB1E7EW31 1015 aa16.79■□□□□ 0.28
DDR1-278ENST00000515233 H0Y858 1186 aa16.79■□□□□ 0.28
DDR1-278ENST00000515233 NRP1O14786 923 aa16.79■□□□□ 0.28
DDR1-278ENST00000515233 ASGR2P07307 311 aa16.79■□□□□ 0.28
DDR1-278ENST00000515233 CNPP09543 421 aaKnown RBP16.79■□□□□ 0.28
DDR1-278ENST00000515233 SRGAP2CP0DJJ0 459 aa16.79■□□□□ 0.28
DDR1-278ENST00000515233 XBP1P17861 261 aa16.79■□□□□ 0.28
DDR1-278ENST00000515233 KLRC2P26717 231 aa16.79■□□□□ 0.28
DDR1-278ENST00000515233 YWHABP31946 246 aaKnown RBP16.79■□□□□ 0.28
DDR1-278ENST00000515233 PCBP1Q15365 356 aaKnown RBP eCLIP16.79■□□□□ 0.28
DDR1-278ENST00000515233 C15orf39Q6ZRI6 1047 aa16.79■□□□□ 0.28
DDR1-278ENST00000515233 ACSF2Q96CM8 615 aaPredicted RBP16.79■□□□□ 0.28
DDR1-278ENST00000515233 FAM193BQ96PV7 902 aaPredicted RBP16.79■□□□□ 0.28
DDR1-278ENST00000515233 FAM86C1Q9NVL1 165 aa16.79■□□□□ 0.28
DDR1-278ENST00000515233 INPPL1O15357 1258 aa16.78■□□□□ 0.28
DDR1-278ENST00000515233 CCNT1O60563 726 aaKnown RBP16.78■□□□□ 0.28
DDR1-278ENST00000515233 CDKL5O76039 1030 aa16.78■□□□□ 0.28
DDR1-278ENST00000515233 SOD2P04179 222 aa16.78■□□□□ 0.28
DDR1-278ENST00000515233 AXLP30530 894 aa16.78■□□□□ 0.28
DDR1-278ENST00000515233 CLCN5P51795 746 aa16.78■□□□□ 0.28
DDR1-278ENST00000515233 POU5F1BQ06416 359 aa16.78■□□□□ 0.28
DDR1-278ENST00000515233 SCRN1Q12765 414 aa16.78■□□□□ 0.28
DDR1-278ENST00000515233 ASTLQ6HA08 431 aaPredicted RBP16.78■□□□□ 0.28
DDR1-278ENST00000515233 OTOP3Q7RTS5 596 aa16.78■□□□□ 0.28
DDR1-278ENST00000515233 FERMT3Q86UX7 667 aa16.78■□□□□ 0.28
DDR1-278ENST00000515233 TMEM105Q8N8V8 129 aa16.78■□□□□ 0.28
DDR1-278ENST00000515233 SMG8Q8ND04 991 aaKnown RBP16.78■□□□□ 0.28
DDR1-278ENST00000515233 LXNQ9BS40 222 aa16.78■□□□□ 0.28
DDR1-278ENST00000515233 SMOC2Q9H3U7 446 aa16.78■□□□□ 0.28
DDR1-278ENST00000515233 ZSWIM4Q9H7M6 989 aa16.78■□□□□ 0.28
DDR1-278ENST00000515233 MRPL17Q9NRX2 175 aaKnown RBP16.78■□□□□ 0.28
DDR1-278ENST00000515233 PDRG1Q9NUG6 133 aa16.78■□□□□ 0.28
DDR1-278ENST00000515233 SSX2IPQ9Y2D8 614 aa16.78■□□□□ 0.28
DDR1-278ENST00000515233 STK36Q9NRP7 1315 aa16.77■□□□□ 0.28
DDR1-278ENST00000515233 GFRA3O60609 400 aa16.77■□□□□ 0.28
DDR1-278ENST00000515233 EFEMP2O95967 443 aa16.77■□□□□ 0.28
DDR1-278ENST00000515233 POMCP01189 267 aa16.77■□□□□ 0.28
DDR1-278ENST00000515233 SPIRE1Q08AE8 756 aa16.77■□□□□ 0.28
DDR1-278ENST00000515233 SLFN12Q8IYM2 578 aa16.77■□□□□ 0.28
DDR1-278ENST00000515233 RNF168Q8IYW5 571 aaPredicted RBP16.77■□□□□ 0.28
DDR1-278ENST00000515233 RNF149Q8NC42 400 aa16.77■□□□□ 0.28
DDR1-278ENST00000515233 FEZF2Q8TBJ5 459 aa16.77■□□□□ 0.28
DDR1-278ENST00000515233 RGL1Q9NZL6 768 aa16.77■□□□□ 0.28
DDR1-278ENST00000515233 BAG4O95429 457 aaKnown RBP16.76■□□□□ 0.27
DDR1-278ENST00000515233 ITGA4P13612 1032 aa16.76■□□□□ 0.27
DDR1-278ENST00000515233 PTENP60484 403 aa16.76■□□□□ 0.27
DDR1-278ENST00000515233 MXD4Q14582 209 aaPredicted RBP16.76■□□□□ 0.27
DDR1-278ENST00000515233 EMC2Q15006 297 aa16.76■□□□□ 0.27
DDR1-278ENST00000515233 XKR9Q5GH70 373 aa16.76■□□□□ 0.27
DDR1-278ENST00000515233 CYP26C1Q6V0L0 522 aa16.76■□□□□ 0.27
DDR1-278ENST00000515233 PIK3AP1Q6ZUJ8 805 aa16.76■□□□□ 0.27
DDR1-278ENST00000515233 CCDC149Q6ZUS6 474 aa16.76■□□□□ 0.27
DDR1-278ENST00000515233 IFNLR1Q8IU57 520 aaPredicted RBP16.76■□□□□ 0.27
DDR1-278ENST00000515233 COLGALT2Q8IYK4 626 aa16.76■□□□□ 0.27
DDR1-278ENST00000515233 CMASQ8NFW8 434 aaPredicted RBP16.76■□□□□ 0.27
DDR1-278ENST00000515233 OXER1Q8TDS5 423 aa16.76■□□□□ 0.27
DDR1-278ENST00000515233 DYDC2Q96IM9 177 aa16.76■□□□□ 0.27
DDR1-278ENST00000515233 RPS6KC1Q96S38 1066 aa16.76■□□□□ 0.27
DDR1-278ENST00000515233 MTRQ99707 1265 aa16.76■□□□□ 0.27
DDR1-278ENST00000515233 RHOBTB2Q9BYZ6 727 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms