RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 DPF2Q92785 391 aa6.41□□□□□ -1.38
RFC1-216ENST00000514572 RGMAQ96B86 450 aa6.41□□□□□ -1.38
RFC1-216ENST00000514572 INTS4Q96HW7 963 aaKnown RBP6.41□□□□□ -1.38
RFC1-216ENST00000514572 PAWRQ96IZ0 340 aaKnown RBP6.41□□□□□ -1.38
RFC1-216ENST00000514572 HIST1H2AHQ96KK5 128 aa6.41□□□□□ -1.38
RFC1-216ENST00000514572 DMRTA2Q96SC8 542 aa6.41□□□□□ -1.38
RFC1-216ENST00000514572 HIST1H2AJQ99878 128 aa6.41□□□□□ -1.38
RFC1-216ENST00000514572 APOL5Q9BWW9 433 aa6.41□□□□□ -1.38
RFC1-216ENST00000514572 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.41□□□□□ -1.38
RFC1-216ENST00000514572 NUP62CLQ9H1M0 184 aa6.41□□□□□ -1.38
RFC1-216ENST00000514572 NGRNQ9NPE2 291 aaKnown RBP6.41□□□□□ -1.38
RFC1-216ENST00000514572 DCP1AQ9NPI6 582 aaPredicted RBP6.41□□□□□ -1.38
RFC1-216ENST00000514572 KMT5AQ9NQR1 393 aa6.41□□□□□ -1.38
RFC1-216ENST00000514572 DLL4Q9NR61 685 aa6.41□□□□□ -1.38
RFC1-216ENST00000514572 RTEL1Q9NZ71 1219 aa6.41□□□□□ -1.38
RFC1-216ENST00000514572 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.41□□□□□ -1.38
RFC1-216ENST00000514572 DBR1Q9UK59 544 aaKnown RBP6.41□□□□□ -1.38
RFC1-216ENST00000514572 NR2E3Q9Y5X4 410 aa6.41□□□□□ -1.38
RFC1-216ENST00000514572 BICRAQ9NZM4 1560 aa6.4□□□□□ -1.38
RFC1-216ENST00000514572 A0A1W2PR48 441 aa6.4□□□□□ -1.38
RFC1-216ENST00000514572 FAM171A2A8MVW0 826 aa6.4□□□□□ -1.38
RFC1-216ENST00000514572 MAFGO15525 162 aa6.4□□□□□ -1.38
RFC1-216ENST00000514572 C8BP07358 591 aa6.4□□□□□ -1.38
RFC1-216ENST00000514572 PIK3CBP42338 1070 aa6.4□□□□□ -1.38
RFC1-216ENST00000514572 PRIM2P49643 509 aa6.4□□□□□ -1.38
RFC1-216ENST00000514572 HK3P52790 923 aa6.4□□□□□ -1.38
RFC1-216ENST00000514572 MEF2AQ02078 507 aaPredicted RBP6.4□□□□□ -1.38
RFC1-216ENST00000514572 CHAF1AQ13111 956 aaPredicted RBP6.4□□□□□ -1.38
RFC1-216ENST00000514572 IFIT5Q13325 482 aaKnown RBP6.4□□□□□ -1.38
RFC1-216ENST00000514572 RAB3GAP1Q15042 981 aa6.4□□□□□ -1.38
RFC1-216ENST00000514572 DGKKQ5KSL6 1271 aa6.4□□□□□ -1.38
RFC1-216ENST00000514572 C1orf228Q6PIY5 440 aa6.4□□□□□ -1.38
RFC1-216ENST00000514572 ZC3H14Q6PJT7 736 aaKnown RBP6.4□□□□□ -1.38
RFC1-216ENST00000514572 DAAM2Q86T65 1068 aa6.4□□□□□ -1.38
RFC1-216ENST00000514572 FAM26EQ8N5C1 309 aa6.4□□□□□ -1.38
RFC1-216ENST00000514572 CDK5RAP3Q96JB5 506 aa6.4□□□□□ -1.38
RFC1-216ENST00000514572 CCDC138Q96M89 665 aa6.4□□□□□ -1.38
RFC1-216ENST00000514572 SAMD11Q96NU1 681 aa6.4□□□□□ -1.38
RFC1-216ENST00000514572 TBCBQ99426 244 aa6.4□□□□□ -1.38
RFC1-216ENST00000514572 ADI1Q9BV57 179 aa6.4□□□□□ -1.38
RFC1-216ENST00000514572 TRMT13Q9NUP7 481 aaKnown RBP6.4□□□□□ -1.38
RFC1-216ENST00000514572 GNL3LQ9NVN8 582 aaKnown RBP6.4□□□□□ -1.38
RFC1-216ENST00000514572 HRKO00198 91 aa6.39□□□□□ -1.39
RFC1-216ENST00000514572 N4BP3O15049 544 aa6.39□□□□□ -1.39
RFC1-216ENST00000514572 PIP5K1CO60331 668 aa6.39□□□□□ -1.39
RFC1-216ENST00000514572 ADAMTS4O75173 837 aa6.39□□□□□ -1.39
RFC1-216ENST00000514572 FTLP02792 175 aaPredicted RBP6.39□□□□□ -1.39
RFC1-216ENST00000514572 MYF5P13349 255 aa6.39□□□□□ -1.39
RFC1-216ENST00000514572 GSPT1P15170 499 aaKnown RBP6.39□□□□□ -1.39
RFC1-216ENST00000514572 SLC6A9P48067 706 aa6.39□□□□□ -1.39
RFC1-216ENST00000514572 ANTXR2P58335 489 aa6.39□□□□□ -1.39
RFC1-216ENST00000514572 NKX3-2P78367 333 aa6.39□□□□□ -1.39
RFC1-216ENST00000514572 NKX6-1P78426 367 aaPredicted RBP6.39□□□□□ -1.39
RFC1-216ENST00000514572 GPSM2P81274 684 aa6.39□□□□□ -1.39
RFC1-216ENST00000514572 PLCL1Q15111 1095 aa6.39□□□□□ -1.39
RFC1-216ENST00000514572 ADGRF1Q5T601 910 aa6.39□□□□□ -1.39
RFC1-216ENST00000514572 THEMIS2Q5TEJ8 643 aa6.39□□□□□ -1.39
RFC1-216ENST00000514572 CXXC5Q7LFL8 322 aaKnown RBP6.39□□□□□ -1.39
RFC1-216ENST00000514572 DPP9Q86TI2 863 aa6.39□□□□□ -1.39
RFC1-216ENST00000514572 TTC7BQ86TV6 843 aa6.39□□□□□ -1.39
RFC1-216ENST00000514572 NKAPQ8N5F7 415 aaKnown RBP6.39□□□□□ -1.39
RFC1-216ENST00000514572 MYRIPQ8NFW9 859 aa6.39□□□□□ -1.39
RFC1-216ENST00000514572 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.39□□□□□ -1.39
RFC1-216ENST00000514572 ABHD4Q8TB40 342 aa6.39□□□□□ -1.39
RFC1-216ENST00000514572 ALG3Q92685 438 aa6.39□□□□□ -1.39
RFC1-216ENST00000514572 PHKBQ93100 1093 aa6.39□□□□□ -1.39
RFC1-216ENST00000514572 APIPQ96GX9 242 aa6.39□□□□□ -1.39
RFC1-216ENST00000514572 ZC3H10Q96K80 434 aaKnown RBP6.39□□□□□ -1.39
RFC1-216ENST00000514572 HERPUD2Q9BSE4 406 aa6.39□□□□□ -1.39
RFC1-216ENST00000514572 SELENOOQ9BVL4 669 aa6.39□□□□□ -1.39
RFC1-216ENST00000514572 KCND1Q9NSA2 647 aa6.39□□□□□ -1.39
RFC1-216ENST00000514572 PAPLNO95428 1278 aa6.38□□□□□ -1.39
RFC1-216ENST00000514572 NRG3P56975 720 aa6.38□□□□□ -1.39
RFC1-216ENST00000514572 BTKQ06187 659 aa6.38□□□□□ -1.39
RFC1-216ENST00000514572 TMEM62Q0P6H9 643 aa6.38□□□□□ -1.39
RFC1-216ENST00000514572 NOGQ13253 232 aa6.38□□□□□ -1.39
RFC1-216ENST00000514572 DGKDQ16760 1214 aa6.38□□□□□ -1.39
RFC1-216ENST00000514572 ZNF792Q3KQV3 632 aa6.38□□□□□ -1.39
RFC1-216ENST00000514572 TUBB8Q3ZCM7 444 aa6.38□□□□□ -1.39
RFC1-216ENST00000514572 GJC2Q5T442 439 aaPredicted RBP6.38□□□□□ -1.39
RFC1-216ENST00000514572 ARTNQ5T4W7 220 aa6.38□□□□□ -1.39
RFC1-216ENST00000514572 TMEM200BQ69YZ2 307 aa6.38□□□□□ -1.39
RFC1-216ENST00000514572 PPP4R3AQ6IN85 833 aa6.38□□□□□ -1.39
RFC1-216ENST00000514572 LMBR1LQ6UX01 489 aa6.38□□□□□ -1.39
RFC1-216ENST00000514572 TMC5Q6UXY8 1006 aa6.38□□□□□ -1.39
RFC1-216ENST00000514572 GPR155Q7Z3F1 870 aa6.38□□□□□ -1.39
RFC1-216ENST00000514572 ZC3H18Q86VM9 953 aaKnown RBP6.38□□□□□ -1.39
RFC1-216ENST00000514572 AGBL5Q8NDL9 886 aa6.38□□□□□ -1.39
RFC1-216ENST00000514572 GPR156Q8NFN8 814 aa6.38□□□□□ -1.39
RFC1-216ENST00000514572 PNISRQ8TF01 805 aaKnown RBP6.38□□□□□ -1.39
RFC1-216ENST00000514572 ANKS1AQ92625 1134 aa6.38□□□□□ -1.39
RFC1-216ENST00000514572 NKD2Q969F2 451 aaPredicted RBP6.38□□□□□ -1.39
RFC1-216ENST00000514572 MRGPRX4Q96LA9 322 aa6.38□□□□□ -1.39
RFC1-216ENST00000514572 NT5C1BQ96P26 610 aa6.38□□□□□ -1.39
RFC1-216ENST00000514572 TMEM209Q96SK2 561 aa6.38□□□□□ -1.39
RFC1-216ENST00000514572 OSBPL6Q9BZF3 934 aa6.38□□□□□ -1.39
RFC1-216ENST00000514572 WDR12Q9GZL7 423 aaKnown RBP6.38□□□□□ -1.39
RFC1-216ENST00000514572 ZMAT3Q9HA38 289 aaKnown RBP6.38□□□□□ -1.39
RFC1-216ENST00000514572 LUZP4Q9P127 313 aa6.38□□□□□ -1.39
RFC1-216ENST00000514572 SIK3Q9Y2K2 1263 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms