RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 TPRNQ4KMQ1 711 aa15.39■□□□□ 0.05
USP46-209ENST00000514536 PAN2Q504Q3 1202 aaKnown RBP15.39■□□□□ 0.05
USP46-209ENST00000514536 UBXN11Q5T124 520 aa15.39■□□□□ 0.05
USP46-209ENST00000514536 RESP18Q5W5W9 173 aa15.39■□□□□ 0.05
USP46-209ENST00000514536 NOTUMQ6P988 496 aa15.39■□□□□ 0.05
USP46-209ENST00000514536 PPP4R3CPQ6ZMV5 832 aa15.39■□□□□ 0.05
USP46-209ENST00000514536 DYMQ7RTS9 669 aa15.39■□□□□ 0.05
USP46-209ENST00000514536 ZNF598Q86UK7 904 aaKnown RBP15.39■□□□□ 0.05
USP46-209ENST00000514536 CDR2LQ86X02 465 aaPredicted RBP15.39■□□□□ 0.05
USP46-209ENST00000514536 FIBCD1Q8N539 461 aa15.39■□□□□ 0.05
USP46-209ENST00000514536 ARNTL2Q8WYA1 636 aa15.39■□□□□ 0.05
USP46-209ENST00000514536 DHX58Q96C10 678 aa15.39■□□□□ 0.05
USP46-209ENST00000514536 NTPCRQ9BSD7 190 aaKnown RBP15.39■□□□□ 0.05
USP46-209ENST00000514536 CCDC113Q9H0I3 377 aa15.39■□□□□ 0.05
USP46-209ENST00000514536 ZHX3Q9H4I2 956 aa15.39■□□□□ 0.05
USP46-209ENST00000514536 ODF2LQ9ULJ1 636 aa15.39■□□□□ 0.05
USP46-209ENST00000514536 PCDHB2Q9Y5E7 798 aa15.39■□□□□ 0.05
USP46-209ENST00000514536 MYH15Q9Y2K3 1946 aa15.39■□□□□ 0.05
USP46-209ENST00000514536 MYMKA6NI61 221 aa15.38■□□□□ 0.05
USP46-209ENST00000514536 TTLL13PA6NNM8 815 aa15.38■□□□□ 0.05
USP46-209ENST00000514536 TBKBP1A7MCY6 615 aa15.38■□□□□ 0.05
USP46-209ENST00000514536 DLL1O00548 723 aa15.38■□□□□ 0.05
USP46-209ENST00000514536 ACKR2O00590 384 aa15.38■□□□□ 0.05
USP46-209ENST00000514536 FAM13AO94988 1023 aa15.38■□□□□ 0.05
USP46-209ENST00000514536 ATF7P17544 494 aaPredicted RBP15.38■□□□□ 0.05
USP46-209ENST00000514536 PRPF4BQ13523 1007 aaKnown RBP15.38■□□□□ 0.05
USP46-209ENST00000514536 TMEM132AQ24JP5 1023 aa15.38■□□□□ 0.05
USP46-209ENST00000514536 ADALQ6DHV7 355 aa15.38■□□□□ 0.05
USP46-209ENST00000514536 CMTR2Q8IYT2 770 aaKnown RBP15.38■□□□□ 0.05
USP46-209ENST00000514536 MYCT1Q8N699 235 aa15.38■□□□□ 0.05
USP46-209ENST00000514536 IQUBQ8NA54 791 aa15.38■□□□□ 0.05
USP46-209ENST00000514536 SPIRE2Q8WWL2 714 aa15.38■□□□□ 0.05
USP46-209ENST00000514536 DDX12PQ92771 950 aa15.38■□□□□ 0.05
USP46-209ENST00000514536 STAMQ92783 540 aa15.38■□□□□ 0.05
USP46-209ENST00000514536 LPPQ93052 612 aa15.38■□□□□ 0.05
USP46-209ENST00000514536 PRIMPOLQ96LW4 560 aa15.38■□□□□ 0.05
USP46-209ENST00000514536 TGS1Q96RS0 853 aaKnown RBP15.38■□□□□ 0.05
USP46-209ENST00000514536 CDX2Q99626 313 aaPredicted RBP15.38■□□□□ 0.05
USP46-209ENST00000514536 EIF2AQ9BY44 585 aaKnown RBP15.38■□□□□ 0.05
USP46-209ENST00000514536 PRDM12Q9H4Q4 367 aa15.38■□□□□ 0.05
USP46-209ENST00000514536 TMEM134Q9H6X4 195 aa15.38■□□□□ 0.05
USP46-209ENST00000514536 RNF19AQ9NV58 838 aa15.38■□□□□ 0.05
USP46-209ENST00000514536 LARSQ9P2J5 1176 aaKnown RBP15.38■□□□□ 0.05
USP46-209ENST00000514536 KCNG1Q9UIX4 513 aa15.38■□□□□ 0.05
USP46-209ENST00000514536 MTUS1Q9ULD2 1270 aa15.38■□□□□ 0.05
USP46-209ENST00000514536 CIZ1Q9ULV3 898 aaPredicted RBP15.38■□□□□ 0.05
USP46-209ENST00000514536 RBM19Q9Y4C8 960 aaKnown RBP15.38■□□□□ 0.05
USP46-209ENST00000514536 A0A1B0GUA9 196 aa15.37■□□□□ 0.05
USP46-209ENST00000514536 RFXAPO00287 272 aa15.37■□□□□ 0.05
USP46-209ENST00000514536 POLR2DO15514 142 aaKnown RBP15.37■□□□□ 0.05
USP46-209ENST00000514536 ZNF623O75123 536 aa15.37■□□□□ 0.05
USP46-209ENST00000514536 RAB27AP51159 221 aa15.37■□□□□ 0.05
USP46-209ENST00000514536 SMTNP53814 917 aa15.37■□□□□ 0.05
USP46-209ENST00000514536 ERVK-21P61565 698 aa15.37■□□□□ 0.05
USP46-209ENST00000514536 E2F4Q16254 413 aa15.37■□□□□ 0.05
USP46-209ENST00000514536 C17orf80Q9BSJ5 609 aa15.37■□□□□ 0.05
USP46-209ENST00000514536 ARHGAP28Q9P2N2 729 aa15.37■□□□□ 0.05
USP46-209ENST00000514536 KCNH3Q9ULD8 1083 aa15.37■□□□□ 0.05
USP46-209ENST00000514536 EPOPA6NHQ4 379 aa15.36■□□□□ 0.05
USP46-209ENST00000514536 MEIS3P2A8K0S8 358 aa15.36■□□□□ 0.05
USP46-209ENST00000514536 HOXA2O43364 376 aa15.36■□□□□ 0.05
USP46-209ENST00000514536 TBCAO75347 108 aaKnown RBP15.36■□□□□ 0.05
USP46-209ENST00000514536 EDN1P05305 212 aa15.36■□□□□ 0.05
USP46-209ENST00000514536 CMA1P23946 247 aa15.36■□□□□ 0.05
USP46-209ENST00000514536 ZNF131P52739 623 aa15.36■□□□□ 0.05
USP46-209ENST00000514536 CLLU1OSQ5K130 101 aa15.36■□□□□ 0.05
USP46-209ENST00000514536 NT5DC1Q5TFE4 455 aa15.36■□□□□ 0.05
USP46-209ENST00000514536 TAS1R3Q7RTX0 852 aa15.36■□□□□ 0.05
USP46-209ENST00000514536 MRPL10Q7Z7H8 261 aaKnown RBP15.36■□□□□ 0.05
USP46-209ENST00000514536 ABI1Q8IZP0 508 aa15.36■□□□□ 0.05
USP46-209ENST00000514536 TMEM161BQ8NDZ6 487 aa15.36■□□□□ 0.05
USP46-209ENST00000514536 MYLIPQ8WY64 445 aa15.36■□□□□ 0.05
USP46-209ENST00000514536 PGBD4Q96DM1 585 aa15.36■□□□□ 0.05
USP46-209ENST00000514536 CCDC51Q96ER9 411 aa15.36■□□□□ 0.05
USP46-209ENST00000514536 CASD1Q96PB1 797 aa15.36■□□□□ 0.05
USP46-209ENST00000514536 TMEM117Q9H0C3 514 aa15.36■□□□□ 0.05
USP46-209ENST00000514536 PARVGQ9HBI0 331 aa15.36■□□□□ 0.05
USP46-209ENST00000514536 MRPL42Q9Y6G3 142 aaKnown RBP15.36■□□□□ 0.05
USP46-209ENST00000514536 CNTNAP2Q9UHC6 1331 aa15.36■□□□□ 0.05
USP46-209ENST00000514536 GBF1Q92538 1859 aa15.36■□□□□ 0.05
USP46-209ENST00000514536 A0A1B0GVL5 298 aa15.36■□□□□ 0.05
USP46-209ENST00000514536 NPTXRO95502 500 aa15.36■□□□□ 0.05
USP46-209ENST00000514536 SLC27A1Q6PCB7 646 aa15.36■□□□□ 0.05
USP46-209ENST00000514536 TMEM192Q8IY95 271 aa15.36■□□□□ 0.05
USP46-209ENST00000514536 SMG8Q8ND04 991 aaKnown RBP15.36■□□□□ 0.05
USP46-209ENST00000514536 HELQQ8TDG4 1101 aa15.36■□□□□ 0.05
USP46-209ENST00000514536 DNAJC19Q96DA6 116 aa15.36■□□□□ 0.05
USP46-209ENST00000514536 TRIM6Q9C030 488 aaPredicted RBP15.36■□□□□ 0.05
USP46-209ENST00000514536 CUEDC2Q9H467 287 aa15.36■□□□□ 0.05
USP46-209ENST00000514536 PDZD7Q9H5P4 517 aa15.36■□□□□ 0.05
USP46-209ENST00000514536 HES2Q9Y543 173 aa15.36■□□□□ 0.05
USP46-209ENST00000514536 N4BP3O15049 544 aa15.35■□□□□ 0.05
USP46-209ENST00000514536 TRAK2O60296 914 aa15.35■□□□□ 0.05
USP46-209ENST00000514536 MAPTP10636 758 aaKnown RBP15.35■□□□□ 0.05
USP46-209ENST00000514536 IDEP14735 1019 aa15.35■□□□□ 0.05
USP46-209ENST00000514536 NCKAP1LP55160 1127 aa15.35■□□□□ 0.05
USP46-209ENST00000514536 EPC2Q52LR7 807 aa15.35■□□□□ 0.05
USP46-209ENST00000514536 EEF1DP3Q658K8 133 aa15.35■□□□□ 0.05
USP46-209ENST00000514536 AGMOQ6ZNB7 445 aa15.35■□□□□ 0.05
USP46-209ENST00000514536 HAUS6Q7Z4H7 955 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms