RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 GUCY2CP25092 1073 aa9.18□□□□□ -0.94
CCL28-204ENST00000514421 SLC12A3P55017 1021 aa9.18□□□□□ -0.94
CCL28-204ENST00000514421 CAPSQ13938 189 aa9.18□□□□□ -0.94
CCL28-204ENST00000514421 PPP2R5AQ15172 486 aa9.18□□□□□ -0.94
CCL28-204ENST00000514421 RRAGBQ5VZM2 374 aa9.18□□□□□ -0.94
CCL28-204ENST00000514421 NPAS4Q8IUM7 802 aa9.18□□□□□ -0.94
CCL28-204ENST00000514421 RNF214Q8ND24 703 aa9.18□□□□□ -0.94
CCL28-204ENST00000514421 SPATA20Q8TB22 786 aa9.18□□□□□ -0.94
CCL28-204ENST00000514421 RAD54LQ92698 747 aa9.18□□□□□ -0.94
CCL28-204ENST00000514421 TRAIPQ9BWF2 469 aa9.18□□□□□ -0.94
CCL28-204ENST00000514421 C2orf40Q9H1Z8 148 aa9.18□□□□□ -0.94
CCL28-204ENST00000514421 ELAC1Q9H777 363 aaKnown RBP9.18□□□□□ -0.94
CCL28-204ENST00000514421 MINDY3Q9H8M7 445 aa9.18□□□□□ -0.94
CCL28-204ENST00000514421 CBX8Q9HC52 389 aa9.18□□□□□ -0.94
CCL28-204ENST00000514421 BLOC1S4Q9NUP1 217 aa9.18□□□□□ -0.94
CCL28-204ENST00000514421 ANO10Q9NW15 660 aa9.18□□□□□ -0.94
CCL28-204ENST00000514421 USP25Q9UHP3 1055 aa9.18□□□□□ -0.94
CCL28-204ENST00000514421 KCNH3Q9ULD8 1083 aa9.18□□□□□ -0.94
CCL28-204ENST00000514421 LRRIQ4A6NIV6 560 aa9.17□□□□□ -0.94
CCL28-204ENST00000514421 ZNF623O75123 536 aa9.17□□□□□ -0.94
CCL28-204ENST00000514421 HIP1RO75146 1068 aa9.17□□□□□ -0.94
CCL28-204ENST00000514421 DGKIO75912 1065 aa9.17□□□□□ -0.94
CCL28-204ENST00000514421 CA3P07451 260 aa9.17□□□□□ -0.94
CCL28-204ENST00000514421 SKIP12755 728 aa9.17□□□□□ -0.94
CCL28-204ENST00000514421 PLCG1P19174 1290 aa9.17□□□□□ -0.94
CCL28-204ENST00000514421 AXLP30530 894 aa9.17□□□□□ -0.94
CCL28-204ENST00000514421 HOXA11P31270 313 aaPredicted RBP9.17□□□□□ -0.94
CCL28-204ENST00000514421 NAMPTP43490 491 aa9.17□□□□□ -0.94
CCL28-204ENST00000514421 ZNF165P49910 485 aa9.17□□□□□ -0.94
CCL28-204ENST00000514421 EFNA5P52803 228 aa9.17□□□□□ -0.94
CCL28-204ENST00000514421 TAP1Q03518 808 aa9.17□□□□□ -0.94
CCL28-204ENST00000514421 DHX8Q14562 1220 aaKnown RBP9.17□□□□□ -0.94
CCL28-204ENST00000514421 MCM6Q14566 821 aa9.17□□□□□ -0.94
CCL28-204ENST00000514421 ARSHQ5FYA8 562 aa9.17□□□□□ -0.94
CCL28-204ENST00000514421 KANK3Q6NY19 840 aa9.17□□□□□ -0.94
CCL28-204ENST00000514421 SARM1Q6SZW1 724 aa9.17□□□□□ -0.94
CCL28-204ENST00000514421 KRBA2Q6ZNG9 492 aa9.17□□□□□ -0.94
CCL28-204ENST00000514421 SV2BQ7L1I2 683 aa9.17□□□□□ -0.94
CCL28-204ENST00000514421 ZBTB8OSQ8IWT0 167 aa9.17□□□□□ -0.94
CCL28-204ENST00000514421 DEPTORQ8TB45 409 aa9.17□□□□□ -0.94
CCL28-204ENST00000514421 DRC1Q96MC2 740 aa9.17□□□□□ -0.94
CCL28-204ENST00000514421 YME1L1Q96TA2 773 aa9.17□□□□□ -0.94
CCL28-204ENST00000514421 NTPCRQ9BSD7 190 aaKnown RBP9.17□□□□□ -0.94
CCL28-204ENST00000514421 RUSC1Q9BVN2 902 aa9.17□□□□□ -0.94
CCL28-204ENST00000514421 TTYH1Q9H313 450 aaPredicted RBP9.17□□□□□ -0.94
CCL28-204ENST00000514421 FZD8Q9H461 694 aa9.17□□□□□ -0.94
CCL28-204ENST00000514421 C17orf75Q9HAS0 396 aa9.17□□□□□ -0.94
CCL28-204ENST00000514421 PRMT7Q9NVM4 692 aaPredicted RBP9.17□□□□□ -0.94
CCL28-204ENST00000514421 TMEM161AQ9NX61 479 aa9.17□□□□□ -0.94
CCL28-204ENST00000514421 MTMR10Q9NXD2 777 aa9.17□□□□□ -0.94
CCL28-204ENST00000514421 STK17AQ9UEE5 414 aa9.17□□□□□ -0.94
CCL28-204ENST00000514421 TTC3P53804 2025 aa9.16□□□□□ -0.94
CCL28-204ENST00000514421 WDR81Q562E7 1941 aa9.16□□□□□ -0.94
CCL28-204ENST00000514421 LINC01553A4QN01 128 aa9.16□□□□□ -0.94
CCL28-204ENST00000514421 CCDC169A6NNP5 214 aa9.16□□□□□ -0.94
CCL28-204ENST00000514421 SFI1A8K8P3 1242 aa9.16□□□□□ -0.94
CCL28-204ENST00000514421 K7ERI5 159 aa9.16□□□□□ -0.94
CCL28-204ENST00000514421 AP5Z1O43299 807 aa9.16□□□□□ -0.94
CCL28-204ENST00000514421 HOXA2O43364 376 aa9.16□□□□□ -0.94
CCL28-204ENST00000514421 ACTN4O43707 911 aaKnown RBP9.16□□□□□ -0.94
CCL28-204ENST00000514421 ERLIN2O94905 339 aa9.16□□□□□ -0.94
CCL28-204ENST00000514421 IBSPP21815 317 aaPredicted RBP9.16□□□□□ -0.94
CCL28-204ENST00000514421 SMTNP53814 917 aa9.16□□□□□ -0.94
CCL28-204ENST00000514421 PEX3P56589 373 aa9.16□□□□□ -0.94
CCL28-204ENST00000514421 NLRP12P59046 1061 aa9.16□□□□□ -0.94
CCL28-204ENST00000514421 MBTD1Q05BQ5 628 aa9.16□□□□□ -0.94
CCL28-204ENST00000514421 GRIN2CQ14957 1233 aa9.16□□□□□ -0.94
CCL28-204ENST00000514421 FAM187BQ17R55 369 aa9.16□□□□□ -0.94
CCL28-204ENST00000514421 LONRF3Q496Y0 759 aa9.16□□□□□ -0.94
CCL28-204ENST00000514421 PPP2R2DQ66LE6 453 aa9.16□□□□□ -0.94
CCL28-204ENST00000514421 CDCA2Q69YH5 1023 aaPredicted RBP9.16□□□□□ -0.94
CCL28-204ENST00000514421 TWF2Q6IBS0 349 aaKnown RBP9.16□□□□□ -0.94
CCL28-204ENST00000514421 Q7L0L9 218 aa9.16□□□□□ -0.94
CCL28-204ENST00000514421 GPBP1Q86WP2 473 aa9.16□□□□□ -0.94
CCL28-204ENST00000514421 ECHDC2Q86YB7 292 aa9.16□□□□□ -0.94
CCL28-204ENST00000514421 DAW1Q8N136 415 aa9.16□□□□□ -0.94
CCL28-204ENST00000514421 FIBCD1Q8N539 461 aa9.16□□□□□ -0.94
CCL28-204ENST00000514421 SPIRE2Q8WWL2 714 aa9.16□□□□□ -0.94
CCL28-204ENST00000514421 BSNDQ8WZ55 320 aa9.16□□□□□ -0.94
CCL28-204ENST00000514421 LARP4BQ92615 738 aaKnown RBP9.16□□□□□ -0.94
CCL28-204ENST00000514421 ZNF689Q96CS4 500 aaPredicted RBP9.16□□□□□ -0.94
CCL28-204ENST00000514421 CCDC51Q96ER9 411 aa9.16□□□□□ -0.94
CCL28-204ENST00000514421 PRIMPOLQ96LW4 560 aa9.16□□□□□ -0.94
CCL28-204ENST00000514421 FAM161BQ96MY7 647 aa9.16□□□□□ -0.94
CCL28-204ENST00000514421 TGS1Q96RS0 853 aaKnown RBP9.16□□□□□ -0.94
CCL28-204ENST00000514421 PYM1Q9BRP8 204 aaKnown RBP9.16□□□□□ -0.94
CCL28-204ENST00000514421 NAT10Q9H0A0 1025 aaKnown RBP9.16□□□□□ -0.94
CCL28-204ENST00000514421 AGPAT5Q9NUQ2 364 aa9.16□□□□□ -0.94
CCL28-204ENST00000514421 FAM13BQ9NYF5 915 aa9.16□□□□□ -0.94
CCL28-204ENST00000514421 PIN4Q9Y237 131 aaKnown RBP9.16□□□□□ -0.94
CCL28-204ENST00000514421 LAMA2P24043 3122 aaKnown RBP9.15□□□□□ -0.94
CCL28-204ENST00000514421 PHLPP2Q6ZVD8 1323 aa9.15□□□□□ -0.94
CCL28-204ENST00000514421 NPHP3-ACAD11A0A0J9YXS1 232 aa9.15□□□□□ -0.94
CCL28-204ENST00000514421 A0A1B0GUA9 196 aa9.15□□□□□ -0.94
CCL28-204ENST00000514421 LCHNA4D1U4 455 aa9.15□□□□□ -0.94
CCL28-204ENST00000514421 ACKR2O00590 384 aa9.15□□□□□ -0.94
CCL28-204ENST00000514421 IKBKBO14920 756 aa9.15□□□□□ -0.94
CCL28-204ENST00000514421 TSPAN1O60635 241 aa9.15□□□□□ -0.94
CCL28-204ENST00000514421 ADCY5O95622 1261 aa9.15□□□□□ -0.94
CCL28-204ENST00000514421 KRT18P05783 430 aaKnown RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms