RNA–Protein interactions for RNA: ENST00000514219.1

TRIM41-206, Transcript of tripartite motif containing 41, humanhuman

TSL 5

Gene TRIM41, Length 459 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-206ENST00000514219 CDCA2Q69YH5 1023 aaPredicted RBP17.5■□□□□ 0.39
TRIM41-206ENST00000514219 KLHL10Q6JEL2 608 aa17.5■□□□□ 0.39
TRIM41-206ENST00000514219 EPM2AIP1Q7L775 607 aaPredicted RBP17.5■□□□□ 0.39
TRIM41-206ENST00000514219 SRGAP1Q7Z6B7 1085 aa17.5■□□□□ 0.39
TRIM41-206ENST00000514219 USP37Q86T82 979 aa17.5■□□□□ 0.39
TRIM41-206ENST00000514219 RPAINQ86UA6 219 aa17.5■□□□□ 0.39
TRIM41-206ENST00000514219 PRIMPOLQ96LW4 560 aa17.5■□□□□ 0.39
TRIM41-206ENST00000514219 GCOM2Q9BZD3 368 aaPredicted RBP17.5■□□□□ 0.39
TRIM41-206ENST00000514219 ARHGAP28Q9P2N2 729 aa17.5■□□□□ 0.39
TRIM41-206ENST00000514219 MAGEC2Q9UBF1 373 aaPredicted RBP17.5■□□□□ 0.39
TRIM41-206ENST00000514219 CTNND2Q9UQB3 1225 aa17.5■□□□□ 0.39
TRIM41-206ENST00000514219 GDAQ9Y2T3 454 aa17.5■□□□□ 0.39
TRIM41-206ENST00000514219 DENND3A2RUS2 1198 aa17.49■□□□□ 0.39
TRIM41-206ENST00000514219 PPP1R3GB7ZBB8 358 aa17.49■□□□□ 0.39
TRIM41-206ENST00000514219 BMP6P22004 513 aa17.49■□□□□ 0.39
TRIM41-206ENST00000514219 PTGS1P23219 599 aa17.49■□□□□ 0.39
TRIM41-206ENST00000514219 GLRA2P23416 452 aa17.49■□□□□ 0.39
TRIM41-206ENST00000514219 MRE11P49959 708 aa17.49■□□□□ 0.39
TRIM41-206ENST00000514219 ADAM17P78536 824 aa17.49■□□□□ 0.39
TRIM41-206ENST00000514219 FKBP3Q00688 224 aaKnown RBP17.49■□□□□ 0.39
TRIM41-206ENST00000514219 PTK7Q13308 1070 aa17.49■□□□□ 0.39
TRIM41-206ENST00000514219 NFIL3Q16649 462 aa17.49■□□□□ 0.39
TRIM41-206ENST00000514219 SLFN12LQ6IEE8 588 aa17.49■□□□□ 0.39
TRIM41-206ENST00000514219 CENPPQ6IPU0 288 aa17.49■□□□□ 0.39
TRIM41-206ENST00000514219 IFNLR1Q8IU57 520 aaPredicted RBP17.49■□□□□ 0.39
TRIM41-206ENST00000514219 RNF149Q8NC42 400 aa17.49■□□□□ 0.39
TRIM41-206ENST00000514219 TMEM161BQ8NDZ6 487 aa17.49■□□□□ 0.39
TRIM41-206ENST00000514219 ATXN2LQ8WWM7 1075 aaKnown RBP17.49■□□□□ 0.39
TRIM41-206ENST00000514219 NLRP7Q8WX94 980 aa17.49■□□□□ 0.39
TRIM41-206ENST00000514219 BICD1Q96G01 975 aa17.49■□□□□ 0.39
TRIM41-206ENST00000514219 GPRC5CQ9NQ84 441 aa17.49■□□□□ 0.39
TRIM41-206ENST00000514219 PRMT7Q9NVM4 692 aaPredicted RBP17.49■□□□□ 0.39
TRIM41-206ENST00000514219 TBC1D7Q9P0N9 293 aa17.49■□□□□ 0.39
TRIM41-206ENST00000514219 TBX20Q9UMR3 447 aa17.49■□□□□ 0.39
TRIM41-206ENST00000514219 SFI1A8K8P3 1242 aa17.48■□□□□ 0.39
TRIM41-206ENST00000514219 HNRNPDLO14979 420 aaKnown RBP17.48■□□□□ 0.39
TRIM41-206ENST00000514219 SLC16A4O15374 487 aa17.48■□□□□ 0.39
TRIM41-206ENST00000514219 PPP1R37O75864 691 aa17.48■□□□□ 0.39
TRIM41-206ENST00000514219 SFPQP23246 707 aaKnown RBP eCLIP17.48■□□□□ 0.39
TRIM41-206ENST00000514219 DNAJB2P25686 324 aa17.48■□□□□ 0.39
TRIM41-206ENST00000514219 HOXD11P31277 338 aaPredicted RBP17.48■□□□□ 0.39
TRIM41-206ENST00000514219 CLCN3P51790 818 aa17.48■□□□□ 0.39
TRIM41-206ENST00000514219 EPHB4P54760 987 aa17.48■□□□□ 0.39
TRIM41-206ENST00000514219 PTGISQ16647 500 aa17.48■□□□□ 0.39
TRIM41-206ENST00000514219 KYAT1Q16773 422 aa17.48■□□□□ 0.39
TRIM41-206ENST00000514219 MARCH8Q5T0T0 291 aa17.48■□□□□ 0.39
TRIM41-206ENST00000514219 C11orf57Q6ZUT1 292 aaPredicted RBP17.48■□□□□ 0.39
TRIM41-206ENST00000514219 SERINC5Q86VE9 423 aa17.48■□□□□ 0.39
TRIM41-206ENST00000514219 MAP4K3Q8IVH8 894 aa17.48■□□□□ 0.39
TRIM41-206ENST00000514219 LRRC71Q8N4P6 559 aa17.48■□□□□ 0.39
TRIM41-206ENST00000514219 CSGALNACT2Q8N6G5 542 aa17.48■□□□□ 0.39
TRIM41-206ENST00000514219 LINC01465Q8N7H1 131 aa17.48■□□□□ 0.39
TRIM41-206ENST00000514219 TMEM174Q8WUU8 243 aa17.48■□□□□ 0.39
TRIM41-206ENST00000514219 SCFD1Q8WVM8 642 aa17.48■□□□□ 0.39
TRIM41-206ENST00000514219 TRAPPC12Q8WVT3 735 aa17.48■□□□□ 0.39
TRIM41-206ENST00000514219 NLRP4Q96MN2 994 aa17.48■□□□□ 0.39
TRIM41-206ENST00000514219 CEP63Q96MT8 703 aa17.48■□□□□ 0.39
TRIM41-206ENST00000514219 CTAGE1Q96RT6 745 aa17.48■□□□□ 0.39
TRIM41-206ENST00000514219 MRPL4Q9BYD3 311 aaKnown RBP17.48■□□□□ 0.39
TRIM41-206ENST00000514219 TRAF3IP3Q9Y228 551 aa17.48■□□□□ 0.39
TRIM41-206ENST00000514219 REV3LO60673 3130 aa17.47■□□□□ 0.39
TRIM41-206ENST00000514219 ARVCFO00192 962 aa17.47■□□□□ 0.39
TRIM41-206ENST00000514219 CETN3O15182 167 aa17.47■□□□□ 0.39
TRIM41-206ENST00000514219 ERLIN2O94905 339 aa17.47■□□□□ 0.39
TRIM41-206ENST00000514219 SRGAP2CP0DJJ0 459 aa17.47■□□□□ 0.39
TRIM41-206ENST00000514219 ITGB8P26012 769 aa17.47■□□□□ 0.39
TRIM41-206ENST00000514219 CAPSQ13938 189 aa17.47■□□□□ 0.39
TRIM41-206ENST00000514219 C1orf53Q5VUE5 145 aa17.47■□□□□ 0.39
TRIM41-206ENST00000514219 ZPBP2Q6X784 338 aa17.47■□□□□ 0.39
TRIM41-206ENST00000514219 SMYD4Q8IYR2 804 aaPredicted RBP17.47■□□□□ 0.39
TRIM41-206ENST00000514219 AOPEPQ8N6M6 819 aa17.47■□□□□ 0.39
TRIM41-206ENST00000514219 ADAMTS19Q8TE59 1207 aa17.47■□□□□ 0.39
TRIM41-206ENST00000514219 THAP9Q9H5L6 903 aa17.47■□□□□ 0.39
TRIM41-206ENST00000514219 CBX8Q9HC52 389 aa17.47■□□□□ 0.39
TRIM41-206ENST00000514219 KIAA1586Q9HCI6 787 aa17.47■□□□□ 0.39
TRIM41-206ENST00000514219 PARNO95453 639 aaKnown RBP17.46■□□□□ 0.39
TRIM41-206ENST00000514219 MYBP10242 640 aa17.46■□□□□ 0.39
TRIM41-206ENST00000514219 CDK11BP21127 795 aaKnown RBP17.46■□□□□ 0.39
TRIM41-206ENST00000514219 EEF1GP26641 437 aaKnown RBP17.46■□□□□ 0.39
TRIM41-206ENST00000514219 NMT1P30419 496 aaKnown RBP17.46■□□□□ 0.39
TRIM41-206ENST00000514219 LIG4P49917 911 aa17.46■□□□□ 0.39
TRIM41-206ENST00000514219 PTENP60484 403 aa17.46■□□□□ 0.39
TRIM41-206ENST00000514219 PPP2R3AQ06190 1150 aa17.46■□□□□ 0.39
TRIM41-206ENST00000514219 BFSP2Q13515 415 aa17.46■□□□□ 0.39
TRIM41-206ENST00000514219 FAM187BQ17R55 369 aa17.46■□□□□ 0.39
TRIM41-206ENST00000514219 TMEM132AQ24JP5 1023 aa17.46■□□□□ 0.39
TRIM41-206ENST00000514219 C12orf56Q8IXR9 622 aa17.46■□□□□ 0.39
TRIM41-206ENST00000514219 KIAA0319LQ8IZA0 1049 aa17.46■□□□□ 0.39
TRIM41-206ENST00000514219 SLC43A3Q8NBI5 491 aa17.46■□□□□ 0.39
TRIM41-206ENST00000514219 CAGE1Q8TC20 777 aa17.46■□□□□ 0.39
TRIM41-206ENST00000514219 ASAP3Q8TDY4 903 aa17.46■□□□□ 0.39
TRIM41-206ENST00000514219 ASB2Q96Q27 587 aa17.46■□□□□ 0.39
TRIM41-206ENST00000514219 STRA6Q9BX79 667 aa17.46■□□□□ 0.39
TRIM41-206ENST00000514219 FAM49AQ9H0Q0 323 aaPredicted RBP17.46■□□□□ 0.39
TRIM41-206ENST00000514219 ZNF576Q9H609 170 aa17.46■□□□□ 0.39
TRIM41-206ENST00000514219 MAPK8IP1Q9UQF2 711 aa17.46■□□□□ 0.39
TRIM41-206ENST00000514219 FRMD4BQ9Y2L6 1034 aa17.46■□□□□ 0.39
TRIM41-206ENST00000514219 NFE2L3Q9Y4A8 694 aa17.46■□□□□ 0.39
TRIM41-206ENST00000514219 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.45■□□□□ 0.38
TRIM41-206ENST00000514219 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms