RNA–Protein interactions for RNA: ENST00000514189.5

PRDM16-208, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRDM16, Length 4,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-208ENST00000514189 LRRC31Q6UY01 552 aa13.97□□□□□ -0.17
PRDM16-208ENST00000514189 FAM20AQ96MK3 541 aa13.97□□□□□ -0.17
PRDM16-208ENST00000514189 MST1RQ04912 1400 aa13.96□□□□□ -0.17
PRDM16-208ENST00000514189 WDR64B1ANS9 1081 aa13.96□□□□□ -0.17
PRDM16-208ENST00000514189 CSPG5O95196 566 aa13.96□□□□□ -0.17
PRDM16-208ENST00000514189 SCP2P22307 547 aa13.96□□□□□ -0.17
PRDM16-208ENST00000514189 GABPAQ06546 454 aa13.96□□□□□ -0.17
PRDM16-208ENST00000514189 PDE1CQ14123 709 aaPredicted RBP13.96□□□□□ -0.17
PRDM16-208ENST00000514189 EPM2AIP1Q7L775 607 aaPredicted RBP13.96□□□□□ -0.17
PRDM16-208ENST00000514189 PPM1NQ8N819 430 aa13.96□□□□□ -0.17
PRDM16-208ENST00000514189 CCT6BQ92526 530 aa13.96□□□□□ -0.17
PRDM16-208ENST00000514189 MTMR8Q96EF0 704 aa13.96□□□□□ -0.17
PRDM16-208ENST00000514189 SMYD3Q9H7B4 428 aa13.96□□□□□ -0.17
PRDM16-208ENST00000514189 COL3A1P02461 1466 aaPredicted RBP13.96□□□□□ -0.17
PRDM16-208ENST00000514189 A6NJR5 290 aa13.96□□□□□ -0.17
PRDM16-208ENST00000514189 PODXLO00592 558 aa13.96□□□□□ -0.17
PRDM16-208ENST00000514189 WNT7AO00755 349 aa13.96□□□□□ -0.17
PRDM16-208ENST00000514189 SNX16P57768 344 aa13.96□□□□□ -0.17
PRDM16-208ENST00000514189 SLC29A2Q14542 456 aa13.96□□□□□ -0.17
PRDM16-208ENST00000514189 RPS6KA2Q15349 733 aa13.96□□□□□ -0.17
PRDM16-208ENST00000514189 CEP55Q53EZ4 464 aa13.96□□□□□ -0.17
PRDM16-208ENST00000514189 CERKQ8TCT0 537 aa13.96□□□□□ -0.17
PRDM16-208ENST00000514189 CFAP57Q96MR6 1250 aa13.96□□□□□ -0.17
PRDM16-208ENST00000514189 YIPF3Q9GZM5 350 aa13.96□□□□□ -0.17
PRDM16-208ENST00000514189 NACA2Q9H009 215 aa13.96□□□□□ -0.17
PRDM16-208ENST00000514189 MAD2L2Q9UI95 211 aa13.96□□□□□ -0.17
PRDM16-208ENST00000514189 CFAP69A5D8W1 941 aa13.96□□□□□ -0.18
PRDM16-208ENST00000514189 GLI1P08151 1106 aa13.96□□□□□ -0.18
PRDM16-208ENST00000514189 CHN1P15882 459 aa13.96□□□□□ -0.18
PRDM16-208ENST00000514189 AP3B2Q13367 1082 aa13.96□□□□□ -0.18
PRDM16-208ENST00000514189 SEZ6Q53EL9 994 aa13.96□□□□□ -0.18
PRDM16-208ENST00000514189 FBXO33Q7Z6M2 555 aa13.96□□□□□ -0.18
PRDM16-208ENST00000514189 TGS1Q96RS0 853 aaKnown RBP13.96□□□□□ -0.18
PRDM16-208ENST00000514189 OSGEPQ9NPF4 335 aa13.96□□□□□ -0.18
PRDM16-208ENST00000514189 KLC4Q9NSK0 619 aa13.96□□□□□ -0.18
PRDM16-208ENST00000514189 PRDM4Q9UKN5 801 aa13.96□□□□□ -0.18
PRDM16-208ENST00000514189 ALG6Q9Y672 507 aa13.96□□□□□ -0.18
PRDM16-208ENST00000514189 ZHX2Q9Y6X8 837 aa13.96□□□□□ -0.18
PRDM16-208ENST00000514189 MAP3K6O95382 1288 aa13.95□□□□□ -0.18
PRDM16-208ENST00000514189 CPP00450 1065 aa13.95□□□□□ -0.18
PRDM16-208ENST00000514189 QARSP47897 775 aaKnown RBP13.95□□□□□ -0.18
PRDM16-208ENST00000514189 FOXD4Q12950 439 aaPredicted RBP13.95□□□□□ -0.18
PRDM16-208ENST00000514189 GRB10Q13322 594 aa13.95□□□□□ -0.18
PRDM16-208ENST00000514189 SF3B3Q15393 1217 aaKnown RBP13.95□□□□□ -0.18
PRDM16-208ENST00000514189 ARHGAP27Q6ZUM4 889 aa13.95□□□□□ -0.18
PRDM16-208ENST00000514189 CATSPER3Q86XQ3 398 aa13.95□□□□□ -0.18
PRDM16-208ENST00000514189 BBOF1Q8ND07 529 aa13.95□□□□□ -0.18
PRDM16-208ENST00000514189 NBPF3Q9H094 633 aa13.95□□□□□ -0.18
PRDM16-208ENST00000514189 PDS5AQ29RF7 1337 aaKnown RBP13.95□□□□□ -0.18
PRDM16-208ENST00000514189 ITIH6Q6UXX5 1313 aa13.95□□□□□ -0.18
PRDM16-208ENST00000514189 ECE2O60344 883 aa13.95□□□□□ -0.18
PRDM16-208ENST00000514189 GSTA1P08263 222 aa13.95□□□□□ -0.18
PRDM16-208ENST00000514189 GSTA2P09210 222 aa13.95□□□□□ -0.18
PRDM16-208ENST00000514189 HSPA6P17066 643 aa13.95□□□□□ -0.18
PRDM16-208ENST00000514189 EPHB1P54762 984 aa13.95□□□□□ -0.18
PRDM16-208ENST00000514189 TMPRSS15P98073 1019 aa13.95□□□□□ -0.18
PRDM16-208ENST00000514189 PDIA5Q14554 519 aa13.95□□□□□ -0.18
PRDM16-208ENST00000514189 MDH1BQ5I0G3 518 aa13.95□□□□□ -0.18
PRDM16-208ENST00000514189 LDHDQ86WU2 507 aa13.95□□□□□ -0.18
PRDM16-208ENST00000514189 CYP2W1Q8TAV3 490 aa13.95□□□□□ -0.18
PRDM16-208ENST00000514189 SYNGAP1Q96PV0 1343 aa13.95□□□□□ -0.18
PRDM16-208ENST00000514189 P4HA1P13674 534 aa13.95□□□□□ -0.18
PRDM16-208ENST00000514189 KRT17Q04695 432 aa13.95□□□□□ -0.18
PRDM16-208ENST00000514189 PDIA2Q13087 525 aaKnown RBP13.95□□□□□ -0.18
PRDM16-208ENST00000514189 KIAA1755Q5JYT7 1200 aa13.95□□□□□ -0.18
PRDM16-208ENST00000514189 PRR5LQ6MZQ0 368 aa13.95□□□□□ -0.18
PRDM16-208ENST00000514189 MAP7D3Q8IWC1 876 aa13.95□□□□□ -0.18
PRDM16-208ENST00000514189 DTX3LQ8TDB6 740 aa13.95□□□□□ -0.18
PRDM16-208ENST00000514189 ATXN7L3BQ96GX2 97 aa13.95□□□□□ -0.18
PRDM16-208ENST00000514189 NUF2Q9BZD4 464 aa13.95□□□□□ -0.18
PRDM16-208ENST00000514189 PXDNQ92626 1479 aa13.95□□□□□ -0.18
PRDM16-208ENST00000514189 CCDC78A2IDD5 438 aa13.95□□□□□ -0.18
PRDM16-208ENST00000514189 TARSL2A2RTX5 802 aaKnown RBP13.95□□□□□ -0.18
PRDM16-208ENST00000514189 ECE1P42892 770 aa13.95□□□□□ -0.18
PRDM16-208ENST00000514189 COG7P83436 770 aa13.95□□□□□ -0.18
PRDM16-208ENST00000514189 TRAPPC11Q7Z392 1133 aa13.95□□□□□ -0.18
PRDM16-208ENST00000514189 CCDC124Q96CT7 223 aaKnown RBP13.95□□□□□ -0.18
PRDM16-208ENST00000514189 TTC1Q99614 292 aa13.95□□□□□ -0.18
PRDM16-208ENST00000514189 AGPAT1Q99943 283 aa13.95□□□□□ -0.18
PRDM16-208ENST00000514189 MIF4GDA9UHW6 222 aaKnown RBP13.94□□□□□ -0.18
PRDM16-208ENST00000514189 GIPC1O14908 333 aa13.94□□□□□ -0.18
PRDM16-208ENST00000514189 PPFIA2O75334 1257 aa13.94□□□□□ -0.18
PRDM16-208ENST00000514189 ASNSP08243 561 aa13.94□□□□□ -0.18
PRDM16-208ENST00000514189 FMO5P49326 533 aa13.94□□□□□ -0.18
PRDM16-208ENST00000514189 CDKAL1Q5VV42 579 aa13.94□□□□□ -0.18
PRDM16-208ENST00000514189 ATG4AQ8WYN0 398 aa13.94□□□□□ -0.18
PRDM16-208ENST00000514189 ACTR5Q9H9F9 607 aaPredicted RBP13.94□□□□□ -0.18
PRDM16-208ENST00000514189 MARCOQ9UEW3 520 aaPredicted RBP13.94□□□□□ -0.18
PRDM16-208ENST00000514189 USP20Q9Y2K6 914 aa13.94□□□□□ -0.18
PRDM16-208ENST00000514189 DCCP43146 1447 aa13.94□□□□□ -0.18
PRDM16-208ENST00000514189 ITGA4P13612 1032 aa13.94□□□□□ -0.18
PRDM16-208ENST00000514189 PSMC6P62333 389 aa13.94□□□□□ -0.18
PRDM16-208ENST00000514189 LMNB2Q03252 620 aa13.94□□□□□ -0.18
PRDM16-208ENST00000514189 SNRNP48Q6IEG0 339 aaKnown RBP13.94□□□□□ -0.18
PRDM16-208ENST00000514189 CENPUQ71F23 418 aa13.94□□□□□ -0.18
PRDM16-208ENST00000514189 GPRC5CQ9NQ84 441 aa13.94□□□□□ -0.18
PRDM16-208ENST00000514189 FGFR1OP2Q9NVK5 253 aa13.94□□□□□ -0.18
PRDM16-208ENST00000514189 TACC3Q9Y6A5 838 aa13.94□□□□□ -0.18
PRDM16-208ENST00000514189 SSU72P8A0A1W2PR75 194 aa13.94□□□□□ -0.18
PRDM16-208ENST00000514189 RNF225M0QZC1 329 aaPredicted RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms