RNA–Protein interactions for RNA: ENST00000514027.5

SDHA-216, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,209 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-216ENST00000514027 IRAK4Q9NWZ3 460 aa13.58□□□□□ -0.24
SDHA-216ENST00000514027 LARSQ9P2J5 1176 aaKnown RBP13.58□□□□□ -0.24
SDHA-216ENST00000514027 TMEM59LQ9UK28 342 aa13.58□□□□□ -0.24
SDHA-216ENST00000514027 EMSYQ7Z589 1322 aa13.57□□□□□ -0.24
SDHA-216ENST00000514027 SART1O43290 800 aaKnown RBP13.57□□□□□ -0.24
SDHA-216ENST00000514027 BUB1BO60566 1050 aaPredicted RBP13.57□□□□□ -0.24
SDHA-216ENST00000514027 AP1G2O75843 785 aa13.57□□□□□ -0.24
SDHA-216ENST00000514027 ASNSP08243 561 aa13.57□□□□□ -0.24
SDHA-216ENST00000514027 ITGA4P13612 1032 aa13.57□□□□□ -0.24
SDHA-216ENST00000514027 EIF2AK2P19525 551 aaKnown RBP13.57□□□□□ -0.24
SDHA-216ENST00000514027 TNFAIP3P21580 790 aa13.57□□□□□ -0.24
SDHA-216ENST00000514027 IBSPP21815 317 aaPredicted RBP13.57□□□□□ -0.24
SDHA-216ENST00000514027 HSD17B4P51659 736 aa13.57□□□□□ -0.24
SDHA-216ENST00000514027 PRPF4BQ13523 1007 aaKnown RBP13.57□□□□□ -0.24
SDHA-216ENST00000514027 NAA35Q5VZE5 725 aa13.57□□□□□ -0.24
SDHA-216ENST00000514027 POTEAQ6S8J7 498 aa13.57□□□□□ -0.24
SDHA-216ENST00000514027 MAATS1Q7Z4T9 603 aa13.57□□□□□ -0.24
SDHA-216ENST00000514027 DDX42Q86XP3 938 aaKnown RBP eCLIP13.57□□□□□ -0.24
SDHA-216ENST00000514027 SLC30A5Q8TAD4 765 aa13.57□□□□□ -0.24
SDHA-216ENST00000514027 NEK9Q8TD19 979 aa13.57□□□□□ -0.24
SDHA-216ENST00000514027 WHAMMQ8TF30 809 aa13.57□□□□□ -0.24
SDHA-216ENST00000514027 TAF1DQ9H5J8 278 aaPredicted RBP13.57□□□□□ -0.24
SDHA-216ENST00000514027 TAS2R14Q9NYV8 317 aa13.57□□□□□ -0.24
SDHA-216ENST00000514027 AMFRQ9UKV5 643 aa13.57□□□□□ -0.24
SDHA-216ENST00000514027 INTUQ9ULD6 942 aa13.57□□□□□ -0.24
SDHA-216ENST00000514027 ZHX2Q9Y6X8 837 aa13.57□□□□□ -0.24
SDHA-216ENST00000514027 ZNF536O15090 1300 aa13.56□□□□□ -0.24
SDHA-216ENST00000514027 PLA2G6O60733 806 aa13.56□□□□□ -0.24
SDHA-216ENST00000514027 P4HBP07237 508 aaKnown RBP13.56□□□□□ -0.24
SDHA-216ENST00000514027 ITGB3BPQ13352 177 aaPredicted RBP13.56□□□□□ -0.24
SDHA-216ENST00000514027 PLCB4Q15147 1175 aa13.56□□□□□ -0.24
SDHA-216ENST00000514027 RBBP5Q15291 538 aaKnown RBP13.56□□□□□ -0.24
SDHA-216ENST00000514027 PHLDB3Q6NSJ2 640 aa13.56□□□□□ -0.24
SDHA-216ENST00000514027 B3GNT9Q6UX72 402 aa13.56□□□□□ -0.24
SDHA-216ENST00000514027 PALB2Q86YC2 1186 aa13.56□□□□□ -0.24
SDHA-216ENST00000514027 RTKN2Q8IZC4 609 aa13.56□□□□□ -0.24
SDHA-216ENST00000514027 SCFD2Q8WU76 684 aa13.56□□□□□ -0.24
SDHA-216ENST00000514027 RFFLQ8WZ73 363 aa13.56□□□□□ -0.24
SDHA-216ENST00000514027 CBWD1Q9BRT8 395 aa13.56□□□□□ -0.24
SDHA-216ENST00000514027 THAP2Q9H0W7 228 aa13.56□□□□□ -0.24
SDHA-216ENST00000514027 KIF9Q9HAQ2 790 aa13.56□□□□□ -0.24
SDHA-216ENST00000514027 ATP6V0A4Q9HBG4 840 aa13.56□□□□□ -0.24
SDHA-216ENST00000514027 RAVER2Q9HCJ3 691 aaKnown RBP13.56□□□□□ -0.24
SDHA-216ENST00000514027 UBE2TQ9NPD8 197 aaPredicted RBP13.56□□□□□ -0.24
SDHA-216ENST00000514027 CPSF2Q9P2I0 782 aaKnown RBP13.56□□□□□ -0.24
SDHA-216ENST00000514027 SUCLA2Q9P2R7 463 aaPredicted RBP13.56□□□□□ -0.24
SDHA-216ENST00000514027 AMACRQ9UHK6 382 aa13.56□□□□□ -0.24
SDHA-216ENST00000514027 TCEAL9Q9UHQ7 104 aa13.56□□□□□ -0.24
SDHA-216ENST00000514027 LOXHD1Q8IVV2 1947 aa13.56□□□□□ -0.24
SDHA-216ENST00000514027 ZNF233A6NK53 670 aa13.56□□□□□ -0.24
SDHA-216ENST00000514027 SKAP2O75563 359 aaPredicted RBP13.56□□□□□ -0.24
SDHA-216ENST00000514027 PPP1R37O75864 691 aa13.56□□□□□ -0.24
SDHA-216ENST00000514027 SNUPNO95149 360 aaKnown RBP13.56□□□□□ -0.24
SDHA-216ENST00000514027 TMEM253P0C7T8 217 aa13.56□□□□□ -0.24
SDHA-216ENST00000514027 PTGER2P43116 358 aa13.56□□□□□ -0.24
SDHA-216ENST00000514027 GCLMP48507 274 aa13.56□□□□□ -0.24
SDHA-216ENST00000514027 ATP1A2P50993 1020 aa13.56□□□□□ -0.24
SDHA-216ENST00000514027 SLC8A3P57103 927 aa13.56□□□□□ -0.24
SDHA-216ENST00000514027 MTMR1Q13613 665 aa13.56□□□□□ -0.24
SDHA-216ENST00000514027 NAA25Q14CX7 972 aa13.56□□□□□ -0.24
SDHA-216ENST00000514027 TKFCQ3LXA3 575 aa13.56□□□□□ -0.24
SDHA-216ENST00000514027 ADAT2Q7Z6V5 191 aaKnown RBP13.56□□□□□ -0.24
SDHA-216ENST00000514027 SLFN11Q7Z7L1 901 aa13.56□□□□□ -0.24
SDHA-216ENST00000514027 OLIG1Q8TAK6 271 aa13.56□□□□□ -0.24
SDHA-216ENST00000514027 PARD3BQ8TEW8 1205 aa13.56□□□□□ -0.24
SDHA-216ENST00000514027 ARHGEF26Q96DR7 871 aa13.56□□□□□ -0.24
SDHA-216ENST00000514027 NCANO14594 1321 aa13.55□□□□□ -0.24
SDHA-216ENST00000514027 ATP8B3O60423 1300 aa13.55□□□□□ -0.24
SDHA-216ENST00000514027 FOXN3O00409 490 aaPredicted RBP13.55□□□□□ -0.24
SDHA-216ENST00000514027 TBC1D12O60347 775 aa13.55□□□□□ -0.24
SDHA-216ENST00000514027 MYCLP12524 364 aaPredicted RBP13.55□□□□□ -0.24
SDHA-216ENST00000514027 EZRP15311 586 aaKnown RBP13.55□□□□□ -0.24
SDHA-216ENST00000514027 RARRES1P49788 294 aa13.55□□□□□ -0.24
SDHA-216ENST00000514027 VAMP7P51809 220 aa13.55□□□□□ -0.24
SDHA-216ENST00000514027 YTHDF3Q7Z739 585 aaKnown RBP13.55□□□□□ -0.24
SDHA-216ENST00000514027 CEP57Q86XR8 500 aa13.55□□□□□ -0.24
SDHA-216ENST00000514027 ZSWIM2Q8NEG5 633 aa13.55□□□□□ -0.24
SDHA-216ENST00000514027 SLC20A1Q8WUM9 679 aa13.55□□□□□ -0.24
SDHA-216ENST00000514027 ACCSQ96QU6 501 aa13.55□□□□□ -0.24
SDHA-216ENST00000514027 PDGFDQ9GZP0 370 aaPredicted RBP13.55□□□□□ -0.24
SDHA-216ENST00000514027 ISCUQ9H1K1 167 aa13.55□□□□□ -0.24
SDHA-216ENST00000514027 CENPHQ9H3R5 247 aa13.55□□□□□ -0.24
SDHA-216ENST00000514027 STK32BQ9NY57 414 aa13.55□□□□□ -0.24
SDHA-216ENST00000514027 PPP1R9AQ9ULJ8 1098 aa13.55□□□□□ -0.24
SDHA-216ENST00000514027 PLAAQ9Y263 795 aa13.55□□□□□ -0.24
SDHA-216ENST00000514027 STXBP5LQ9Y2K9 1186 aa13.55□□□□□ -0.24
SDHA-216ENST00000514027 RPS6KL1Q9Y6S9 549 aa13.55□□□□□ -0.24
SDHA-216ENST00000514027 FGGP02679 453 aa13.55□□□□□ -0.24
SDHA-216ENST00000514027 BCRP11274 1271 aa13.55□□□□□ -0.24
SDHA-216ENST00000514027 QARSP47897 775 aaKnown RBP13.55□□□□□ -0.24
SDHA-216ENST00000514027 RPS6KA3P51812 740 aa13.55□□□□□ -0.24
SDHA-216ENST00000514027 NPEPPSP55786 919 aa13.55□□□□□ -0.24
SDHA-216ENST00000514027 CETN1Q12798 172 aa13.55□□□□□ -0.24
SDHA-216ENST00000514027 SNCBQ16143 134 aa13.55□□□□□ -0.24
SDHA-216ENST00000514027 CDCA2Q69YH5 1023 aaPredicted RBP13.55□□□□□ -0.24
SDHA-216ENST00000514027 INTS8Q75QN2 995 aaKnown RBP13.55□□□□□ -0.24
SDHA-216ENST00000514027 SLC9A9Q8IVB4 645 aa13.55□□□□□ -0.24
SDHA-216ENST00000514027 ARHGEF19Q8IW93 802 aa13.55□□□□□ -0.24
SDHA-216ENST00000514027 NIM1KQ8IY84 436 aa13.55□□□□□ -0.24
SDHA-216ENST00000514027 CLEC4DQ8WXI8 215 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms