RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 MLKLQ8NB16 471 aa11.17□□□□□ -0.62
NEDD9-214ENST00000513989 ASAP3Q8TDY4 903 aa11.17□□□□□ -0.62
NEDD9-214ENST00000513989 HVCN1Q96D96 273 aa11.17□□□□□ -0.62
NEDD9-214ENST00000513989 PBX4Q9BYU1 374 aa11.17□□□□□ -0.62
NEDD9-214ENST00000513989 WNT8AQ9H1J5 351 aa11.17□□□□□ -0.62
NEDD9-214ENST00000513989 ADAMTS10Q9H324 1103 aa11.17□□□□□ -0.62
NEDD9-214ENST00000513989 HIPK3Q9H422 1215 aa11.17□□□□□ -0.62
NEDD9-214ENST00000513989 ST6GALNAC4Q9H4F1 302 aa11.17□□□□□ -0.62
NEDD9-214ENST00000513989 TMEM206Q9H813 350 aa11.17□□□□□ -0.62
NEDD9-214ENST00000513989 TBC1D7Q9P0N9 293 aa11.17□□□□□ -0.62
NEDD9-214ENST00000513989 SQORQ9Y6N5 450 aa11.17□□□□□ -0.62
NEDD9-214ENST00000513989 TCF20Q9UGU0 1960 aaKnown RBP11.17□□□□□ -0.62
NEDD9-214ENST00000513989 A0A087WZ62 844 aa11.16□□□□□ -0.62
NEDD9-214ENST00000513989 DENND3A2RUS2 1198 aa11.16□□□□□ -0.62
NEDD9-214ENST00000513989 INO80B-WBP1J3KQ70 363 aa11.16□□□□□ -0.62
NEDD9-214ENST00000513989 K7ENM7 598 aa11.16□□□□□ -0.62
NEDD9-214ENST00000513989 GPR182O15218 404 aa11.16□□□□□ -0.62
NEDD9-214ENST00000513989 KLRC4O43908 158 aa11.16□□□□□ -0.62
NEDD9-214ENST00000513989 GPR32O75388 356 aa11.16□□□□□ -0.62
NEDD9-214ENST00000513989 CCDC192P0DO97 292 aa11.16□□□□□ -0.62
NEDD9-214ENST00000513989 FOSL2P15408 326 aa11.16□□□□□ -0.62
NEDD9-214ENST00000513989 SELPP16109 830 aa11.16□□□□□ -0.62
NEDD9-214ENST00000513989 SFPQP23246 707 aaKnown RBP eCLIP11.16□□□□□ -0.623e-6■■■□□ 15.9
NEDD9-214ENST00000513989 NCKAP1LP55160 1127 aa11.16□□□□□ -0.62
NEDD9-214ENST00000513989 GTF2BQ00403 316 aa11.16□□□□□ -0.62
NEDD9-214ENST00000513989 CAPSQ13938 189 aa11.16□□□□□ -0.62
NEDD9-214ENST00000513989 HSP90AA2PQ14568 343 aaPredicted RBP11.16□□□□□ -0.62
NEDD9-214ENST00000513989 CT47A1Q5JQC4 288 aaPredicted RBP11.16□□□□□ -0.62
NEDD9-214ENST00000513989 L1TD1Q5T7N2 865 aaKnown RBP11.16□□□□□ -0.62
NEDD9-214ENST00000513989 RBM43Q6ZSC3 357 aaKnown RBP11.16□□□□□ -0.62
NEDD9-214ENST00000513989 APBB1IPQ7Z5R6 666 aaPredicted RBP11.16□□□□□ -0.62
NEDD9-214ENST00000513989 KSR1Q8IVT5 923 aa11.16□□□□□ -0.62
NEDD9-214ENST00000513989 MYOCDQ8IZQ8 938 aa11.16□□□□□ -0.62
NEDD9-214ENST00000513989 SYCP3Q8IZU3 236 aa11.16□□□□□ -0.62
NEDD9-214ENST00000513989 TMEM161BQ8NDZ6 487 aa11.16□□□□□ -0.62
NEDD9-214ENST00000513989 ACCSQ96QU6 501 aa11.16□□□□□ -0.62
NEDD9-214ENST00000513989 FDXACB1Q9BRP7 624 aaPredicted RBP11.16□□□□□ -0.62
NEDD9-214ENST00000513989 NOC4LQ9BVI4 516 aaKnown RBP11.16□□□□□ -0.62
NEDD9-214ENST00000513989 NAT10Q9H0A0 1025 aaKnown RBP11.16□□□□□ -0.62
NEDD9-214ENST00000513989 ZNF576Q9H609 170 aa11.16□□□□□ -0.62
NEDD9-214ENST00000513989 SLC39A2Q9NP94 309 aa11.16□□□□□ -0.62
NEDD9-214ENST00000513989 PRMT7Q9NVM4 692 aaPredicted RBP11.16□□□□□ -0.62
NEDD9-214ENST00000513989 ANO10Q9NW15 660 aa11.16□□□□□ -0.62
NEDD9-214ENST00000513989 TMEM63CQ9P1W3 806 aa11.16□□□□□ -0.62
NEDD9-214ENST00000513989 MAN1B1Q9UKM7 699 aa11.16□□□□□ -0.62
NEDD9-214ENST00000513989 CDY2AQ9Y6F7 541 aa11.16□□□□□ -0.62
NEDD9-214ENST00000513989 BIN1O00499 593 aa11.15□□□□□ -0.62
NEDD9-214ENST00000513989 EIF3DO15371 548 aaKnown RBP eCLIP11.15□□□□□ -0.62
NEDD9-214ENST00000513989 RPS6KA5O75582 802 aa11.15□□□□□ -0.62
NEDD9-214ENST00000513989 ERLIN2O94905 339 aa11.15□□□□□ -0.62
NEDD9-214ENST00000513989 CHRNA1P02708 482 aa11.15□□□□□ -0.62
NEDD9-214ENST00000513989 CTSHP09668 335 aa11.15□□□□□ -0.62
NEDD9-214ENST00000513989 DARSP14868 501 aaKnown RBP11.15□□□□□ -0.62
NEDD9-214ENST00000513989 RFC2P35250 354 aa11.15□□□□□ -0.62
NEDD9-214ENST00000513989 NLRP12P59046 1061 aa11.15□□□□□ -0.62
NEDD9-214ENST00000513989 SNRPFP62306 86 aaKnown RBP11.15□□□□□ -0.62
NEDD9-214ENST00000513989 RBL2Q08999 1139 aa11.15□□□□□ -0.62
NEDD9-214ENST00000513989 STK4Q13043 487 aa11.15□□□□□ -0.62
NEDD9-214ENST00000513989 MORC3Q14149 939 aa11.15□□□□□ -0.62
NEDD9-214ENST00000513989 ZNF618Q5T7W0 954 aa11.15□□□□□ -0.62
NEDD9-214ENST00000513989 CDCA2Q69YH5 1023 aaPredicted RBP11.15□□□□□ -0.62
NEDD9-214ENST00000513989 ISM2Q6H9L7 571 aa11.15□□□□□ -0.62
NEDD9-214ENST00000513989 LRRC8DQ7L1W4 858 aa11.15□□□□□ -0.62
NEDD9-214ENST00000513989 CATSPER4Q7RTX7 472 aa11.15□□□□□ -0.62
NEDD9-214ENST00000513989 IFNLR1Q8IU57 520 aaPredicted RBP11.15□□□□□ -0.62
NEDD9-214ENST00000513989 RPUSD2Q8IZ73 545 aaKnown RBP11.15□□□□□ -0.62
NEDD9-214ENST00000513989 TMEM199Q8N511 208 aa11.15□□□□□ -0.62
NEDD9-214ENST00000513989 GOLGA5Q8TBA6 731 aa11.15□□□□□ -0.62
NEDD9-214ENST00000513989 BSNDQ8WZ55 320 aa11.15□□□□□ -0.62
NEDD9-214ENST00000513989 HERVK_113Q902F9 699 aa11.15□□□□□ -0.62
NEDD9-214ENST00000513989 ERCC4Q92889 916 aaPredicted RBP11.15□□□□□ -0.62
NEDD9-214ENST00000513989 TIFAQ96CG3 184 aa11.15□□□□□ -0.62
NEDD9-214ENST00000513989 BICD1Q96G01 975 aa11.15□□□□□ -0.62
NEDD9-214ENST00000513989 PRIMPOLQ96LW4 560 aa11.15□□□□□ -0.62
NEDD9-214ENST00000513989 CTAGE1Q96RT6 745 aa11.15□□□□□ -0.62
NEDD9-214ENST00000513989 PPP1R16BQ96T49 567 aa11.15□□□□□ -0.62
NEDD9-214ENST00000513989 MRPL4Q9BYD3 311 aaKnown RBP11.15□□□□□ -0.62
NEDD9-214ENST00000513989 IFT122Q9HBG6 1241 aa11.15□□□□□ -0.62
NEDD9-214ENST00000513989 IL23AQ9NPF7 189 aa11.15□□□□□ -0.62
NEDD9-214ENST00000513989 ARHGAP28Q9P2N2 729 aa11.15□□□□□ -0.62
NEDD9-214ENST00000513989 TBX20Q9UMR3 447 aa11.15□□□□□ -0.62
NEDD9-214ENST00000513989 COL4A4P53420 1690 aaPredicted RBP11.14□□□□□ -0.63
NEDD9-214ENST00000513989 UBE4BO95155 1302 aa11.14□□□□□ -0.63
NEDD9-214ENST00000513989 MYH15Q9Y2K3 1946 aa11.14□□□□□ -0.63
NEDD9-214ENST00000513989 RBAK-RBAKDNI3L0D1 243 aa11.14□□□□□ -0.63
NEDD9-214ENST00000513989 ACKR2O00590 384 aa11.14□□□□□ -0.63
NEDD9-214ENST00000513989 PSMA7O14818 248 aa11.14□□□□□ -0.63
NEDD9-214ENST00000513989 CAVIN2O95810 425 aa11.14□□□□□ -0.63
NEDD9-214ENST00000513989 IQCF3P0C7M6 154 aa11.14□□□□□ -0.63
NEDD9-214ENST00000513989 ZSCAN20P17040 1043 aaPredicted RBP11.14□□□□□ -0.63
NEDD9-214ENST00000513989 NMT1P30419 496 aaKnown RBP11.14□□□□□ -0.63
NEDD9-214ENST00000513989 AXLP30530 894 aa11.14□□□□□ -0.63
NEDD9-214ENST00000513989 EHHADHQ08426 723 aa11.14□□□□□ -0.63
NEDD9-214ENST00000513989 NFX1Q12986 1120 aaKnown RBP11.14□□□□□ -0.63
NEDD9-214ENST00000513989 PAK2Q13177 524 aa11.14□□□□□ -0.63
NEDD9-214ENST00000513989 PRPF4BQ13523 1007 aaKnown RBP11.14□□□□□ -0.63
NEDD9-214ENST00000513989 FAM187BQ17R55 369 aa11.14□□□□□ -0.63
NEDD9-214ENST00000513989 KNOP1Q1ED39 458 aaKnown RBP11.14□□□□□ -0.63
NEDD9-214ENST00000513989 TRIM71Q2Q1W2 868 aaKnown RBP11.14□□□□□ -0.63
NEDD9-214ENST00000513989 ZSCAN23Q3MJ62 389 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms