RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 RRN3P2A6NIE6 340 aa8.8□□□□□ -1
CLDND1-229ENST00000513988 C2CD2LO14523 706 aa8.8□□□□□ -1
CLDND1-229ENST00000513988 KHNYNO15037 678 aaKnown RBP8.8□□□□□ -1
CLDND1-229ENST00000513988 TDO2P48775 406 aa8.8□□□□□ -1
CLDND1-229ENST00000513988 E2F4Q16254 413 aa8.8□□□□□ -1
CLDND1-229ENST00000513988 CLLU1OSQ5K130 101 aa8.8□□□□□ -1
CLDND1-229ENST00000513988 COLEC12Q5KU26 742 aa8.8□□□□□ -1
CLDND1-229ENST00000513988 CCNI2Q6ZMN8 369 aaPredicted RBP8.8□□□□□ -1
CLDND1-229ENST00000513988 AACSQ86V21 672 aa8.8□□□□□ -1
CLDND1-229ENST00000513988 SCUBE3Q8IX30 993 aa8.8□□□□□ -1
CLDND1-229ENST00000513988 ZNF513Q8N8E2 541 aaPredicted RBP8.8□□□□□ -1
CLDND1-229ENST00000513988 HELQQ8TDG4 1101 aa8.8□□□□□ -1
CLDND1-229ENST00000513988 BCL7CQ8WUZ0 217 aaPredicted RBP8.8□□□□□ -1
CLDND1-229ENST00000513988 SPIRE2Q8WWL2 714 aa8.8□□□□□ -1
CLDND1-229ENST00000513988 DNASE1L2Q92874 299 aa8.8□□□□□ -1
CLDND1-229ENST00000513988 FGF13Q92913 245 aa8.8□□□□□ -1
CLDND1-229ENST00000513988 ZC3H10Q96K80 434 aaKnown RBP8.8□□□□□ -1
CLDND1-229ENST00000513988 PRKD2Q9BZL6 878 aa8.8□□□□□ -1
CLDND1-229ENST00000513988 API5Q9BZZ5 524 aaKnown RBP8.8□□□□□ -1
CLDND1-229ENST00000513988 ZDHHC7Q9NXF8 308 aa8.8□□□□□ -1
CLDND1-229ENST00000513988 STK39Q9UEW8 545 aa8.8□□□□□ -1
CLDND1-229ENST00000513988 SEPT9Q9UHD8 586 aaPredicted RBP8.8□□□□□ -1
CLDND1-229ENST00000513988 RABGEF1Q9UJ41 708 aa8.8□□□□□ -1
CLDND1-229ENST00000513988 DOCK5Q9H7D0 1870 aa8.79□□□□□ -1
CLDND1-229ENST00000513988 BCLAF3A2AJT9 711 aaKnown RBP8.79□□□□□ -1
CLDND1-229ENST00000513988 GSG1L2A8MUP6 293 aa8.79□□□□□ -1
CLDND1-229ENST00000513988 NMT2O60551 498 aa8.79□□□□□ -1
CLDND1-229ENST00000513988 AKAP3O75969 853 aa8.79□□□□□ -1
CLDND1-229ENST00000513988 PAPLNO95428 1278 aa8.79□□□□□ -1
CLDND1-229ENST00000513988 CFBP00751 764 aa8.79□□□□□ -1
CLDND1-229ENST00000513988 CHGBP05060 677 aa8.79□□□□□ -1
CLDND1-229ENST00000513988 SPATA31D3P0C874 917 aa8.79□□□□□ -1
CLDND1-229ENST00000513988 CHRNB1P11230 501 aa8.79□□□□□ -1
CLDND1-229ENST00000513988 CCND2P30279 289 aa8.79□□□□□ -1
CLDND1-229ENST00000513988 AK2P54819 239 aa8.79□□□□□ -1
CLDND1-229ENST00000513988 PTGDRQ13258 359 aa8.79□□□□□ -1
CLDND1-229ENST00000513988 LRRC32Q14392 662 aa8.79□□□□□ -1
CLDND1-229ENST00000513988 UBE3CQ15386 1083 aa8.79□□□□□ -1
CLDND1-229ENST00000513988 ELF2Q15723 593 aa8.79□□□□□ -1
CLDND1-229ENST00000513988 GNPTABQ3T906 1256 aa8.79□□□□□ -1
CLDND1-229ENST00000513988 SPATA31D4Q6ZUB0 917 aa8.79□□□□□ -1
CLDND1-229ENST00000513988 VSIG10LQ86VR7 867 aa8.79□□□□□ -1
CLDND1-229ENST00000513988 NME8Q8N427 588 aa8.79□□□□□ -1
CLDND1-229ENST00000513988 HDAC7Q8WUI4 952 aa8.79□□□□□ -1
CLDND1-229ENST00000513988 VN1R3Q9BXE9 311 aa8.79□□□□□ -1
CLDND1-229ENST00000513988 PUS7LQ9H0K6 701 aaKnown RBP8.79□□□□□ -1
CLDND1-229ENST00000513988 PLEKHA4Q9H4M7 779 aa8.79□□□□□ -1
CLDND1-229ENST00000513988 ERAP1Q9NZ08 941 aa8.79□□□□□ -1
CLDND1-229ENST00000513988 DKK4Q9UBT3 224 aa8.79□□□□□ -1
CLDND1-229ENST00000513988 TELO2Q9Y4R8 837 aa8.79□□□□□ -1
CLDND1-229ENST00000513988 PCDHA1Q9Y5I3 950 aa8.79□□□□□ -1
CLDND1-229ENST00000513988 ATMQ13315 3056 aa8.79□□□□□ -1
CLDND1-229ENST00000513988 DOCK6Q96HP0 2047 aa8.78□□□□□ -1
CLDND1-229ENST00000513988 TSPY2A6NKD2 308 aa8.78□□□□□ -1
CLDND1-229ENST00000513988 TEX28O15482 410 aa8.78□□□□□ -1
CLDND1-229ENST00000513988 ECI2O75521 394 aa8.78□□□□□ -1
CLDND1-229ENST00000513988 URODP06132 367 aa8.78□□□□□ -1
CLDND1-229ENST00000513988 SLC3A2P08195 630 aaKnown RBP8.78□□□□□ -1
CLDND1-229ENST00000513988 HOXC13P31276 330 aa8.78□□□□□ -1
CLDND1-229ENST00000513988 TCF7P36402 384 aaPredicted RBP8.78□□□□□ -1
CLDND1-229ENST00000513988 PXNP49023 591 aaPredicted RBP8.78□□□□□ -1
CLDND1-229ENST00000513988 CSRP3P50461 194 aa8.78□□□□□ -1
CLDND1-229ENST00000513988 DSC3Q14574 896 aa8.78□□□□□ -1
CLDND1-229ENST00000513988 PGM5Q15124 567 aa8.78□□□□□ -1
CLDND1-229ENST00000513988 PLK5Q496M5 336 aa8.78□□□□□ -1
CLDND1-229ENST00000513988 GRASPQ7Z6J2 395 aaPredicted RBP8.78□□□□□ -1
CLDND1-229ENST00000513988 ECHDC2Q86YB7 292 aa8.78□□□□□ -1
CLDND1-229ENST00000513988 IL31RAQ8NI17 732 aa8.78□□□□□ -1
CLDND1-229ENST00000513988 TMEM40Q8WWA1 233 aa8.78□□□□□ -1
CLDND1-229ENST00000513988 STRBPQ96SI9 672 aaKnown RBP8.78□□□□□ -1
CLDND1-229ENST00000513988 PRORYQ9H606 182 aa8.78□□□□□ -1
CLDND1-229ENST00000513988 BRD9Q9H8M2 597 aa8.78□□□□□ -1
CLDND1-229ENST00000513988 IL17RBQ9NRM6 502 aa8.78□□□□□ -1
CLDND1-229ENST00000513988 PAG1Q9NWQ8 432 aa8.78□□□□□ -1
CLDND1-229ENST00000513988 MRPL11Q9Y3B7 192 aaKnown RBP8.78□□□□□ -1
CLDND1-229ENST00000513988 PCDHA2Q9Y5H9 948 aa8.78□□□□□ -1
CLDND1-229ENST00000513988 MAP3K7O43318 606 aa8.77□□□□□ -1.01
CLDND1-229ENST00000513988 RHOBTB1O94844 696 aa8.77□□□□□ -1.01
CLDND1-229ENST00000513988 GALTP07902 379 aa8.77□□□□□ -1.01
CLDND1-229ENST00000513988 INSRRP14616 1297 aa8.77□□□□□ -1.01
CLDND1-229ENST00000513988 NTHL1P78549 312 aa8.77□□□□□ -1.01
CLDND1-229ENST00000513988 ALDH1L2Q3SY69 923 aa8.77□□□□□ -1.01
CLDND1-229ENST00000513988 Q6ZS52 159 aa8.77□□□□□ -1.01
CLDND1-229ENST00000513988 PIP4P1Q86T03 277 aa8.77□□□□□ -1.01
CLDND1-229ENST00000513988 RPS6KC1Q96S38 1066 aa8.77□□□□□ -1.01
CLDND1-229ENST00000513988 ARID3AQ99856 593 aa8.77□□□□□ -1.01
CLDND1-229ENST00000513988 CDHR5Q9HBB8 845 aa8.77□□□□□ -1.01
CLDND1-229ENST00000513988 RBM12Q9NTZ6 932 aaKnown RBP8.77□□□□□ -1.01
CLDND1-229ENST00000513988 WDR70Q9NW82 654 aa8.77□□□□□ -1.01
CLDND1-229ENST00000513988 C2orf42Q9NWW7 574 aa8.77□□□□□ -1.01
CLDND1-229ENST00000513988 NOB1Q9ULX3 412 aaKnown RBP8.77□□□□□ -1.01
CLDND1-229ENST00000513988 SSX2IPQ9Y2D8 614 aa8.77□□□□□ -1.01
CLDND1-229ENST00000513988 PIAS3Q9Y6X2 628 aa8.77□□□□□ -1.01
CLDND1-229ENST00000513988 RELNP78509 3460 aa8.77□□□□□ -1.01
CLDND1-229ENST00000513988 PLXNB3Q9ULL4 1909 aa8.76□□□□□ -1.01
CLDND1-229ENST00000513988 LRRK2Q5S007 2527 aa8.76□□□□□ -1.01
CLDND1-229ENST00000513988 CCDC163A0A0D9SF12 145 aa8.76□□□□□ -1.01
CLDND1-229ENST00000513988 SMIM35A0A1B0GVV1 85 aa8.76□□□□□ -1.01
CLDND1-229ENST00000513988 SLC28A2O43868 658 aa8.76□□□□□ -1.01
CLDND1-229ENST00000513988 GAS2O43903 313 aaKnown RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms