RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 KIAA0319Q5VV43 1072 aa12.33□□□□□ -0.44
DDX41-216ENST00000513562 APOA5Q6Q788 366 aa12.33□□□□□ -0.44
DDX41-216ENST00000513562 GET4Q7L5D6 327 aaPredicted RBP12.33□□□□□ -0.44
DDX41-216ENST00000513562 ZNF410Q86VK4 478 aa12.33□□□□□ -0.44
DDX41-216ENST00000513562 RNF168Q8IYW5 571 aaPredicted RBP12.33□□□□□ -0.44
DDX41-216ENST00000513562 HDAC7Q8WUI4 952 aa12.33□□□□□ -0.44
DDX41-216ENST00000513562 SHDQ96IW2 340 aa12.33□□□□□ -0.44
DDX41-216ENST00000513562 CEP89Q96ST8 783 aa12.33□□□□□ -0.44
DDX41-216ENST00000513562 FDXACB1Q9BRP7 624 aaPredicted RBP12.33□□□□□ -0.44
DDX41-216ENST00000513562 INO80BQ9C086 356 aaPredicted RBP12.33□□□□□ -0.44
DDX41-216ENST00000513562 DISC1Q9NRI5 854 aa12.33□□□□□ -0.44
DDX41-216ENST00000513562 FAN1Q9Y2M0 1017 aa12.33□□□□□ -0.44
DDX41-216ENST00000513562 PCDHB2Q9Y5E7 798 aa12.33□□□□□ -0.44
DDX41-216ENST00000513562 PCDHGA2Q9Y5H1 932 aa12.33□□□□□ -0.44
DDX41-216ENST00000513562 NUMBLQ9Y6R0 609 aa12.33□□□□□ -0.44
DDX41-216ENST00000513562 CFAP47Q6ZTR5 3102 aa12.33□□□□□ -0.44
DDX41-216ENST00000513562 GPR179Q6PRD1 2367 aa12.33□□□□□ -0.44
DDX41-216ENST00000513562 PRR5-ARHGAP8B1AHC4 643 aa12.32□□□□□ -0.44
DDX41-216ENST00000513562 NRP1O14786 923 aa12.32□□□□□ -0.44
DDX41-216ENST00000513562 C1RP00736 705 aa12.32□□□□□ -0.44
DDX41-216ENST00000513562 CIITAP33076 1130 aa12.32□□□□□ -0.44
DDX41-216ENST00000513562 GLUD2P49448 558 aa12.32□□□□□ -0.44
DDX41-216ENST00000513562 ARHGAP8P85298 464 aa12.32□□□□□ -0.44
DDX41-216ENST00000513562 LMNB2Q03252 620 aa12.32□□□□□ -0.44
DDX41-216ENST00000513562 RTN1Q16799 776 aa12.32□□□□□ -0.44
DDX41-216ENST00000513562 SYNE3Q6ZMZ3 975 aa12.32□□□□□ -0.44
DDX41-216ENST00000513562 TAS1R1Q7RTX1 841 aa12.32□□□□□ -0.44
DDX41-216ENST00000513562 CATSPER4Q7RTX7 472 aa12.32□□□□□ -0.44
DDX41-216ENST00000513562 MRPL10Q7Z7H8 261 aaKnown RBP12.32□□□□□ -0.44
DDX41-216ENST00000513562 DDX23Q9BUQ8 820 aaKnown RBP12.32□□□□□ -0.44
DDX41-216ENST00000513562 PLEKHA4Q9H4M7 779 aa12.32□□□□□ -0.44
DDX41-216ENST00000513562 RSAD1Q9HA92 442 aa12.32□□□□□ -0.44
DDX41-216ENST00000513562 AGPAT5Q9NUQ2 364 aa12.32□□□□□ -0.44
DDX41-216ENST00000513562 ZDHHC7Q9NXF8 308 aa12.32□□□□□ -0.44
DDX41-216ENST00000513562 KANSL3Q9P2N6 904 aa12.32□□□□□ -0.44
DDX41-216ENST00000513562 CDV3Q9UKY7 258 aaKnown RBP12.32□□□□□ -0.44
DDX41-216ENST00000513562 CNTNAP2Q9UHC6 1331 aa12.32□□□□□ -0.44
DDX41-216ENST00000513562 ACACBO00763 2458 aa12.31□□□□□ -0.44
DDX41-216ENST00000513562 KANSL1LA0AUZ9 987 aa12.31□□□□□ -0.44
DDX41-216ENST00000513562 ESYT2A0FGR8 921 aa12.31□□□□□ -0.44
DDX41-216ENST00000513562 SLC27A2O14975 620 aa12.31□□□□□ -0.44
DDX41-216ENST00000513562 ADAMTS3O15072 1205 aa12.31□□□□□ -0.44
DDX41-216ENST00000513562 LAMTOR5O43504 91 aa12.31□□□□□ -0.44
DDX41-216ENST00000513562 MYBP10242 640 aa12.31□□□□□ -0.44
DDX41-216ENST00000513562 SFNP31947 248 aa12.31□□□□□ -0.44
DDX41-216ENST00000513562 DNM2P50570 870 aa12.31□□□□□ -0.44
DDX41-216ENST00000513562 DSG1Q02413 1049 aa12.31□□□□□ -0.44
DDX41-216ENST00000513562 ST3GAL2Q16842 350 aa12.31□□□□□ -0.44
DDX41-216ENST00000513562 ZBTB44Q8NCP5 570 aa12.31□□□□□ -0.44
DDX41-216ENST00000513562 EXOC6Q8TAG9 804 aa12.31□□□□□ -0.44
DDX41-216ENST00000513562 FAM193BQ96PV7 902 aaPredicted RBP12.31□□□□□ -0.44
DDX41-216ENST00000513562 RTKNQ9BST9 563 aa12.31□□□□□ -0.44
DDX41-216ENST00000513562 NIFKQ9BYG3 293 aaKnown RBP12.31□□□□□ -0.44
DDX41-216ENST00000513562 BCO2Q9BYV7 579 aa12.31□□□□□ -0.44
DDX41-216ENST00000513562 NT5C3AQ9H0P0 336 aa12.31□□□□□ -0.44
DDX41-216ENST00000513562 EPC1Q9H2F5 836 aa12.31□□□□□ -0.44
DDX41-216ENST00000513562 SPATA6Q9NWH7 488 aaPredicted RBP12.31□□□□□ -0.44
DDX41-216ENST00000513562 SEPT9Q9UHD8 586 aaPredicted RBP12.31□□□□□ -0.44
DDX41-216ENST00000513562 SMG5Q9UPR3 1016 aaKnown RBP12.31□□□□□ -0.44
DDX41-216ENST00000513562 PRG3Q9Y2Y8 225 aaPredicted RBP12.31□□□□□ -0.44
DDX41-216ENST00000513562 ZFP37Q9Y6Q3 630 aaPredicted RBP12.31□□□□□ -0.44
DDX41-216ENST00000513562 TMEM150BA6NC51 233 aa12.3□□□□□ -0.44
DDX41-216ENST00000513562 CHMP2AO43633 222 aa12.3□□□□□ -0.44
DDX41-216ENST00000513562 STBD1O95210 358 aa12.3□□□□□ -0.44
DDX41-216ENST00000513562 POMCP01189 267 aa12.3□□□□□ -0.44
DDX41-216ENST00000513562 ADRB1P08588 477 aa12.3□□□□□ -0.44
DDX41-216ENST00000513562 TGM1P22735 817 aa12.3□□□□□ -0.44
DDX41-216ENST00000513562 JAK3P52333 1124 aa12.3□□□□□ -0.44
DDX41-216ENST00000513562 GPC5P78333 572 aa12.3□□□□□ -0.44
DDX41-216ENST00000513562 PFKFB3Q16875 520 aaPredicted RBP12.3□□□□□ -0.44
DDX41-216ENST00000513562 MTERF2Q49AM1 385 aa12.3□□□□□ -0.44
DDX41-216ENST00000513562 RHPN2Q8IUC4 686 aa12.3□□□□□ -0.44
DDX41-216ENST00000513562 REXO1Q8N1G1 1221 aaKnown RBP12.3□□□□□ -0.44
DDX41-216ENST00000513562 ATRIPQ8WXE1 791 aa12.3□□□□□ -0.44
DDX41-216ENST00000513562 NELL1Q92832 810 aa12.3□□□□□ -0.44
DDX41-216ENST00000513562 FGF14Q92915 247 aa12.3□□□□□ -0.44
DDX41-216ENST00000513562 SECISBP2LQ93073 1101 aaKnown RBP12.3□□□□□ -0.44
DDX41-216ENST00000513562 PHKBQ93100 1093 aa12.3□□□□□ -0.44
DDX41-216ENST00000513562 RIT2Q99578 217 aa12.3□□□□□ -0.44
DDX41-216ENST00000513562 RPP25Q9BUL9 199 aaKnown RBP12.3□□□□□ -0.44
DDX41-216ENST00000513562 OSBPL6Q9BZF3 934 aa12.3□□□□□ -0.44
DDX41-216ENST00000513562 PRKD2Q9BZL6 878 aa12.3□□□□□ -0.44
DDX41-216ENST00000513562 LSG1Q9H089 658 aaKnown RBP12.3□□□□□ -0.44
DDX41-216ENST00000513562 ZMYND12Q9H0C1 365 aa12.3□□□□□ -0.44
DDX41-216ENST00000513562 UNC45AQ9H3U1 944 aa12.3□□□□□ -0.44
DDX41-216ENST00000513562 PIDD1Q9HB75 910 aa12.3□□□□□ -0.44
DDX41-216ENST00000513562 IFT122Q9HBG6 1241 aa12.3□□□□□ -0.44
DDX41-216ENST00000513562 CHST7Q9NS84 486 aa12.3□□□□□ -0.44
DDX41-216ENST00000513562 SUCLA2Q9P2R7 463 aaPredicted RBP12.3□□□□□ -0.44
DDX41-216ENST00000513562 C2orf16Q68DN1 1984 aa12.3□□□□□ -0.44
DDX41-216ENST00000513562 MSH4O15457 936 aa12.29□□□□□ -0.44
DDX41-216ENST00000513562 ZBTB43O43298 467 aa12.29□□□□□ -0.44
DDX41-216ENST00000513562 TGM5O43548 720 aa12.29□□□□□ -0.44
DDX41-216ENST00000513562 GAS7O60861 476 aa12.29□□□□□ -0.44
DDX41-216ENST00000513562 LILRB5O75023 590 aa12.29□□□□□ -0.44
DDX41-216ENST00000513562 MAFO75444 373 aaPredicted RBP12.29□□□□□ -0.44
DDX41-216ENST00000513562 SPATA31D3P0C874 917 aa12.29□□□□□ -0.44
DDX41-216ENST00000513562 MAGEA9P43362 315 aa12.29□□□□□ -0.44
DDX41-216ENST00000513562 PRKCQQ04759 706 aa12.29□□□□□ -0.44
DDX41-216ENST00000513562 CSTF1Q05048 431 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms