RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 LRIT3Q3SXY7 679 aa4.77□□□□□ -1.65
PDLIM5-218ENST00000513341 SUPT20HL1Q3ZLR7 823 aa4.77□□□□□ -1.65
PDLIM5-218ENST00000513341 MROH9Q5TGP6 573 aa4.77□□□□□ -1.65
PDLIM5-218ENST00000513341 UNC5AQ6ZN44 842 aa4.77□□□□□ -1.65
PDLIM5-218ENST00000513341 UBE2Q1Q7Z7E8 422 aa4.77□□□□□ -1.65
PDLIM5-218ENST00000513341 APOBEC3FQ8IUX4 373 aaKnown RBP4.77□□□□□ -1.65
PDLIM5-218ENST00000513341 Q8N1Y9 231 aa4.77□□□□□ -1.65
PDLIM5-218ENST00000513341 ARHGEF39Q8N4T4 335 aa4.77□□□□□ -1.65
PDLIM5-218ENST00000513341 NGEFQ8N5V2 710 aa4.77□□□□□ -1.65
PDLIM5-218ENST00000513341 VOPP1Q96AW1 172 aa4.77□□□□□ -1.65
PDLIM5-218ENST00000513341 RCC1LQ96I51 464 aaKnown RBP4.77□□□□□ -1.65
PDLIM5-218ENST00000513341 PHACTR3Q96KR7 559 aa4.77□□□□□ -1.65
PDLIM5-218ENST00000513341 TMEM209Q96SK2 561 aa4.77□□□□□ -1.65
PDLIM5-218ENST00000513341 KLHL25Q9H0H3 589 aa4.77□□□□□ -1.65
PDLIM5-218ENST00000513341 MRS2Q9HD23 443 aa4.77□□□□□ -1.65
PDLIM5-218ENST00000513341 HSPBP1Q9NZL4 362 aa4.77□□□□□ -1.65
PDLIM5-218ENST00000513341 TRMT112Q9UI30 125 aaKnown RBP4.77□□□□□ -1.65
PDLIM5-218ENST00000513341 LRRC37AA6NMS7 1700 aa4.77□□□□□ -1.65
PDLIM5-218ENST00000513341 TAF1P21675 1872 aa4.77□□□□□ -1.65
PDLIM5-218ENST00000513341 BRCA2P51587 3418 aa4.76□□□□□ -1.65
PDLIM5-218ENST00000513341 CENPFP49454 3210 aa4.76□□□□□ -1.65
PDLIM5-218ENST00000513341 FAM86C2PA6NEL3 165 aa4.76□□□□□ -1.65
PDLIM5-218ENST00000513341 U2SURPO15042 1029 aaKnown RBP4.76□□□□□ -1.65
PDLIM5-218ENST00000513341 HSP90B1P14625 803 aaKnown RBP4.76□□□□□ -1.65
PDLIM5-218ENST00000513341 GUCY2CP25092 1073 aa4.76□□□□□ -1.65
PDLIM5-218ENST00000513341 GJA8P48165 433 aa4.76□□□□□ -1.65
PDLIM5-218ENST00000513341 ATXN1P54253 815 aaKnown RBP4.76□□□□□ -1.65
PDLIM5-218ENST00000513341 GPSM2P81274 684 aa4.76□□□□□ -1.65
PDLIM5-218ENST00000513341 AMPD2Q01433 879 aa4.76□□□□□ -1.65
PDLIM5-218ENST00000513341 KIF22Q14807 665 aa4.76□□□□□ -1.65
PDLIM5-218ENST00000513341 NRN1LQ496H8 165 aa4.76□□□□□ -1.65
PDLIM5-218ENST00000513341 TCTN3Q6NUS6 607 aa4.76□□□□□ -1.65
PDLIM5-218ENST00000513341 MILR1Q7Z6M3 343 aa4.76□□□□□ -1.65
PDLIM5-218ENST00000513341 NLRP10Q86W26 655 aa4.76□□□□□ -1.65
PDLIM5-218ENST00000513341 DEFB123Q8N688 67 aa4.76□□□□□ -1.65
PDLIM5-218ENST00000513341 GIPC2Q8TF65 315 aa4.76□□□□□ -1.65
PDLIM5-218ENST00000513341 WNK4Q96J92 1243 aa4.76□□□□□ -1.65
PDLIM5-218ENST00000513341 HAUS7Q99871 368 aa4.76□□□□□ -1.65
PDLIM5-218ENST00000513341 POLR3GLQ9BT43 218 aa4.76□□□□□ -1.65
PDLIM5-218ENST00000513341 ZCCHC17Q9NP64 241 aaKnown RBP4.76□□□□□ -1.65
PDLIM5-218ENST00000513341 DUOX1Q9NRD9 1551 aa4.76□□□□□ -1.65
PDLIM5-218ENST00000513341 MTMR10Q9NXD2 777 aa4.76□□□□□ -1.65
PDLIM5-218ENST00000513341 PPP2R3BQ9Y5P8 575 aa4.76□□□□□ -1.65
PDLIM5-218ENST00000513341 PTCH2Q9Y6C5 1203 aa4.76□□□□□ -1.65
PDLIM5-218ENST00000513341 SLC4A7Q9Y6M7 1214 aa4.76□□□□□ -1.65
PDLIM5-218ENST00000513341 PSME4Q14997 1843 aa4.76□□□□□ -1.65
PDLIM5-218ENST00000513341 LAMB2P55268 1798 aa4.76□□□□□ -1.65
PDLIM5-218ENST00000513341 HTTP42858 3142 aa4.75□□□□□ -1.65
PDLIM5-218ENST00000513341 SCN9AQ15858 1988 aa4.75□□□□□ -1.65
PDLIM5-218ENST00000513341 FOXS1O43638 330 aa4.75□□□□□ -1.65
PDLIM5-218ENST00000513341 CHGBP05060 677 aa4.75□□□□□ -1.65
PDLIM5-218ENST00000513341 MYL6BP14649 208 aa4.75□□□□□ -1.65
PDLIM5-218ENST00000513341 HOXD10P28358 340 aa4.75□□□□□ -1.65
PDLIM5-218ENST00000513341 STAT5AP42229 794 aa4.75□□□□□ -1.65
PDLIM5-218ENST00000513341 EIF4A1P60842 406 aaKnown RBP4.75□□□□□ -1.65
PDLIM5-218ENST00000513341 ZYXQ15942 572 aaKnown RBP4.75□□□□□ -1.65
PDLIM5-218ENST00000513341 LSM12Q3MHD2 195 aaKnown RBP4.75□□□□□ -1.65
PDLIM5-218ENST00000513341 USP39Q53GS9 565 aaKnown RBP4.75□□□□□ -1.65
PDLIM5-218ENST00000513341 STRIP1Q5VSL9 837 aa4.75□□□□□ -1.65
PDLIM5-218ENST00000513341 FAM109BQ6ICB4 259 aaPredicted RBP4.75□□□□□ -1.65
PDLIM5-218ENST00000513341 MCM10Q7L590 875 aa4.75□□□□□ -1.65
PDLIM5-218ENST00000513341 ANKRD13AQ8IZ07 590 aa4.75□□□□□ -1.65
PDLIM5-218ENST00000513341 CELF1Q92879 486 aaKnown RBP4.75□□□□□ -1.65
PDLIM5-218ENST00000513341 COPS5Q92905 334 aa4.75□□□□□ -1.65
PDLIM5-218ENST00000513341 ADOQ96SZ5 270 aa4.75□□□□□ -1.65
PDLIM5-218ENST00000513341 GDF15Q99988 308 aa4.75□□□□□ -1.65
PDLIM5-218ENST00000513341 GBP3Q9H0R5 595 aa4.75□□□□□ -1.65
PDLIM5-218ENST00000513341 NUDCQ9Y266 331 aa4.75□□□□□ -1.65
PDLIM5-218ENST00000513341 X6R8D5 127 aa4.75□□□□□ -1.65
PDLIM5-218ENST00000513341 LAMB4A4D0S4 1761 aa4.75□□□□□ -1.65
PDLIM5-218ENST00000513341 COL1A1P02452 1464 aaPredicted RBP4.75□□□□□ -1.65
PDLIM5-218ENST00000513341 TLR2O60603 784 aa4.74□□□□□ -1.65
PDLIM5-218ENST00000513341 VAMP4O75379 141 aa4.74□□□□□ -1.65
PDLIM5-218ENST00000513341 PPM1BO75688 479 aa4.74□□□□□ -1.65
PDLIM5-218ENST00000513341 SGPL1O95470 568 aa4.74□□□□□ -1.65
PDLIM5-218ENST00000513341 THBDP07204 575 aa4.74□□□□□ -1.65
PDLIM5-218ENST00000513341 ZNF16P17020 682 aaPredicted RBP4.74□□□□□ -1.65
PDLIM5-218ENST00000513341 PRKAR2BP31323 418 aa4.74□□□□□ -1.65
PDLIM5-218ENST00000513341 GTF2A2P52657 109 aa4.74□□□□□ -1.65
PDLIM5-218ENST00000513341 UBXN2AP68543 259 aa4.74□□□□□ -1.65
PDLIM5-218ENST00000513341 PRKG1Q13976 671 aa4.74□□□□□ -1.65
PDLIM5-218ENST00000513341 DACT2Q5SW24 774 aa4.74□□□□□ -1.65
PDLIM5-218ENST00000513341 HS2ST1Q7LGA3 356 aa4.74□□□□□ -1.65
PDLIM5-218ENST00000513341 LRP10Q7Z4F1 713 aa4.74□□□□□ -1.65
PDLIM5-218ENST00000513341 LDLRAD3Q86YD5 345 aa4.74□□□□□ -1.65
PDLIM5-218ENST00000513341 SCUBE1Q8IWY4 988 aa4.74□□□□□ -1.65
PDLIM5-218ENST00000513341 TOE1Q96GM8 510 aaKnown RBP4.74□□□□□ -1.65
PDLIM5-218ENST00000513341 ZBED3Q96IU2 234 aaPredicted RBP4.74□□□□□ -1.65
PDLIM5-218ENST00000513341 DEFB129Q9H1M3 183 aa4.74□□□□□ -1.65
PDLIM5-218ENST00000513341 BABAM1Q9NWV8 329 aa4.74□□□□□ -1.65
PDLIM5-218ENST00000513341 DTLQ9NZJ0 730 aa4.74□□□□□ -1.65
PDLIM5-218ENST00000513341 MARCH2Q9P0N8 246 aa4.74□□□□□ -1.65
PDLIM5-218ENST00000513341 CGGBP1Q9UFW8 167 aaPredicted RBP4.74□□□□□ -1.65
PDLIM5-218ENST00000513341 STAP2Q9UGK3 403 aa4.74□□□□□ -1.65
PDLIM5-218ENST00000513341 C22orf46C9J442 243 aa4.73□□□□□ -1.65
PDLIM5-218ENST00000513341 UFL1O94874 794 aa4.73□□□□□ -1.65
PDLIM5-218ENST00000513341 COL6A1P12109 1028 aa4.73□□□□□ -1.65
PDLIM5-218ENST00000513341 LACTBP83111 547 aaPredicted RBP4.73□□□□□ -1.65
PDLIM5-218ENST00000513341 DPY19L1Q2PZI1 675 aa4.73□□□□□ -1.65
PDLIM5-218ENST00000513341 AGBL4Q5VU57 503 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms