RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 KCTD10Q9H3F6 313 aa13.77□□□□□ -0.21
PDPN-210ENST00000513143 TSPY26PQ9H489 355 aa13.77□□□□□ -0.21
PDPN-210ENST00000513143 TMEM206Q9H813 350 aa13.77□□□□□ -0.21
PDPN-210ENST00000513143 GINS2Q9Y248 185 aa13.77□□□□□ -0.21
PDPN-210ENST00000513143 INO80B-WBP1J3KQ70 363 aa13.76□□□□□ -0.21
PDPN-210ENST00000513143 ACKR2O00590 384 aa13.76□□□□□ -0.21
PDPN-210ENST00000513143 TGFB1I1O43294 461 aa13.76□□□□□ -0.21
PDPN-210ENST00000513143 PRKCBP05771 671 aa13.76□□□□□ -0.21
PDPN-210ENST00000513143 CTSHP09668 335 aa13.76□□□□□ -0.21
PDPN-210ENST00000513143 IQCF3P0C7M6 154 aa13.76□□□□□ -0.21
PDPN-210ENST00000513143 CCNE1P24864 410 aa13.76□□□□□ -0.21
PDPN-210ENST00000513143 STRN3Q13033 797 aa13.76□□□□□ -0.21
PDPN-210ENST00000513143 PAK1Q13153 545 aa13.76□□□□□ -0.21
PDPN-210ENST00000513143 BFSP2Q13515 415 aa13.76□□□□□ -0.21
PDPN-210ENST00000513143 PCBP1Q15365 356 aaKnown RBP eCLIP13.76□□□□□ -0.21
PDPN-210ENST00000513143 ZNF618Q5T7W0 954 aa13.76□□□□□ -0.21
PDPN-210ENST00000513143 KLHL10Q6JEL2 608 aa13.76□□□□□ -0.21
PDPN-210ENST00000513143 FOXR2Q6PJQ5 311 aa13.76□□□□□ -0.21
PDPN-210ENST00000513143 TRAF7Q6Q0C0 670 aa13.76□□□□□ -0.21
PDPN-210ENST00000513143 TMEM40Q8WWA1 233 aa13.76□□□□□ -0.21
PDPN-210ENST00000513143 NELFBQ8WX92 580 aa13.76□□□□□ -0.21
PDPN-210ENST00000513143 BPIFA3Q9BQP9 254 aa13.76□□□□□ -0.21
PDPN-210ENST00000513143 NAT10Q9H0A0 1025 aaKnown RBP13.76□□□□□ -0.21
PDPN-210ENST00000513143 SEMA6BQ9H3T3 888 aa13.76□□□□□ -0.21
PDPN-210ENST00000513143 PRMT7Q9NVM4 692 aaPredicted RBP13.76□□□□□ -0.21
PDPN-210ENST00000513143 RWDD2AQ9UIY3 292 aa13.76□□□□□ -0.21
PDPN-210ENST00000513143 EXOC7Q9UPT5 735 aa13.76□□□□□ -0.21
PDPN-210ENST00000513143 ATP11BQ9Y2G3 1177 aa13.76□□□□□ -0.21
PDPN-210ENST00000513143 ALPK3Q96L96 1907 aa13.76□□□□□ -0.21
PDPN-210ENST00000513143 MKI67P46013 3256 aaKnown RBP13.76□□□□□ -0.21
PDPN-210ENST00000513143 ZMYM2Q9UBW7 1377 aa13.76□□□□□ -0.21
PDPN-210ENST00000513143 PDXKO00764 312 aa13.75□□□□□ -0.21
PDPN-210ENST00000513143 CSDE1O75534 798 aaKnown RBP13.75□□□□□ -0.21
PDPN-210ENST00000513143 PIGRP01833 764 aa13.75□□□□□ -0.21
PDPN-210ENST00000513143 EDN1P05305 212 aa13.75□□□□□ -0.21
PDPN-210ENST00000513143 ZNF165P49910 485 aa13.75□□□□□ -0.21
PDPN-210ENST00000513143 PMS1P54277 932 aaKnown RBP13.75□□□□□ -0.21
PDPN-210ENST00000513143 SNRPFP62306 86 aaKnown RBP13.75□□□□□ -0.21
PDPN-210ENST00000513143 AMHR2Q16671 573 aa13.75□□□□□ -0.21
PDPN-210ENST00000513143 ZCWPW2Q504Y3 356 aa13.75□□□□□ -0.21
PDPN-210ENST00000513143 SYCP3Q8IZU3 236 aa13.75□□□□□ -0.21
PDPN-210ENST00000513143 P2RX5Q93086 422 aa13.75□□□□□ -0.21
PDPN-210ENST00000513143 PRIMPOLQ96LW4 560 aa13.75□□□□□ -0.21
PDPN-210ENST00000513143 MED15Q96RN5 788 aa13.75□□□□□ -0.21
PDPN-210ENST00000513143 NOC4LQ9BVI4 516 aaKnown RBP13.75□□□□□ -0.21
PDPN-210ENST00000513143 MRPL4Q9BYD3 311 aaKnown RBP13.75□□□□□ -0.21
PDPN-210ENST00000513143 GBP3Q9H0R5 595 aa13.75□□□□□ -0.21
PDPN-210ENST00000513143 IKZF4Q9H2S9 585 aa13.75□□□□□ -0.21
PDPN-210ENST00000513143 TYW1Q9NV66 732 aaKnown RBP13.75□□□□□ -0.21
PDPN-210ENST00000513143 TBX21Q9UL17 535 aa13.75□□□□□ -0.21
PDPN-210ENST00000513143 CTNND2Q9UQB3 1225 aa13.75□□□□□ -0.21
PDPN-210ENST00000513143 TRAF3IP3Q9Y228 551 aa13.75□□□□□ -0.21
PDPN-210ENST00000513143 SQORQ9Y6N5 450 aa13.75□□□□□ -0.21
PDPN-210ENST00000513143 TANC1Q9C0D5 1861 aa13.75□□□□□ -0.21
PDPN-210ENST00000513143 BICDL2A1A5D9 508 aa13.74□□□□□ -0.21
PDPN-210ENST00000513143 TTLL13PA6NNM8 815 aa13.74□□□□□ -0.21
PDPN-210ENST00000513143 CLTBP09497 229 aa13.74□□□□□ -0.21
PDPN-210ENST00000513143 SELPP16109 830 aa13.74□□□□□ -0.21
PDPN-210ENST00000513143 SFPQP23246 707 aaKnown RBP eCLIP13.74□□□□□ -0.21
PDPN-210ENST00000513143 LRRC63Q05C16 580 aa13.74□□□□□ -0.21
PDPN-210ENST00000513143 FBXO47Q5MNV8 452 aa13.74□□□□□ -0.21
PDPN-210ENST00000513143 ANKRD40Q6AI12 368 aa13.74□□□□□ -0.21
PDPN-210ENST00000513143 TTI2Q6NXR4 508 aa13.74□□□□□ -0.21
PDPN-210ENST00000513143 ZPBP2Q6X784 338 aa13.74□□□□□ -0.21
PDPN-210ENST00000513143 LRRC8DQ7L1W4 858 aa13.74□□□□□ -0.21
PDPN-210ENST00000513143 GOLGA5Q8TBA6 731 aa13.74□□□□□ -0.21
PDPN-210ENST00000513143 ENOX1Q8TC92 643 aaKnown RBP13.74□□□□□ -0.21
PDPN-210ENST00000513143 TARS2Q9BW92 718 aaKnown RBP13.74□□□□□ -0.21
PDPN-210ENST00000513143 CGNQ9P2M7 1197 aaKnown RBP13.74□□□□□ -0.21
PDPN-210ENST00000513143 NOC2LQ9Y3T9 749 aaKnown RBP13.74□□□□□ -0.21
PDPN-210ENST00000513143 CNTNAP2Q9UHC6 1331 aa13.73□□□□□ -0.21
PDPN-210ENST00000513143 TRIM49BA6NDI0 452 aa13.73□□□□□ -0.21
PDPN-210ENST00000513143 ANKRD63C9JTQ0 380 aa13.73□□□□□ -0.21
PDPN-210ENST00000513143 HNRNPDLO14979 420 aaKnown RBP13.73□□□□□ -0.21
PDPN-210ENST00000513143 B4GALT5O43286 388 aa13.73□□□□□ -0.21
PDPN-210ENST00000513143 CALUO43852 315 aaPredicted RBP13.73□□□□□ -0.21
PDPN-210ENST00000513143 TSPAN1O60635 241 aa13.73□□□□□ -0.21
PDPN-210ENST00000513143 ERLIN2O94905 339 aa13.73□□□□□ -0.21
PDPN-210ENST00000513143 FGFR4P22455 802 aa13.73□□□□□ -0.21
PDPN-210ENST00000513143 LIG4P49917 911 aa13.73□□□□□ -0.21
PDPN-210ENST00000513143 STX17P56962 302 aa13.73□□□□□ -0.21
PDPN-210ENST00000513143 PRPF4BQ13523 1007 aaKnown RBP13.73□□□□□ -0.21
PDPN-210ENST00000513143 MBTPS1Q14703 1052 aa13.73□□□□□ -0.21
PDPN-210ENST00000513143 IQCB1Q15051 598 aa13.73□□□□□ -0.21
PDPN-210ENST00000513143 NFIL3Q16649 462 aa13.73□□□□□ -0.21
PDPN-210ENST00000513143 EDRF1Q3B7T1 1238 aa13.73□□□□□ -0.21
PDPN-210ENST00000513143 SLC39A4Q6P5W5 647 aa13.73□□□□□ -0.21
PDPN-210ENST00000513143 TSHZ1Q6ZSZ6 1077 aa13.73□□□□□ -0.21
PDPN-210ENST00000513143 HS2ST1Q7LGA3 356 aa13.73□□□□□ -0.21
PDPN-210ENST00000513143 CATSPER4Q7RTX7 472 aa13.73□□□□□ -0.21
PDPN-210ENST00000513143 FAM228AQ86W67 206 aa13.73□□□□□ -0.21
PDPN-210ENST00000513143 GAS2L3Q86XJ1 694 aa13.73□□□□□ -0.21
PDPN-210ENST00000513143 USP38Q8NB14 1042 aa13.73□□□□□ -0.21
PDPN-210ENST00000513143 FAM200AQ8TCP9 573 aa13.73□□□□□ -0.21
PDPN-210ENST00000513143 TMEM174Q8WUU8 243 aa13.73□□□□□ -0.21
PDPN-210ENST00000513143 BICD1Q96G01 975 aa13.73□□□□□ -0.21
PDPN-210ENST00000513143 ACO2Q99798 780 aaKnown RBP13.73□□□□□ -0.21
PDPN-210ENST00000513143 TSG101Q99816 390 aa13.73□□□□□ -0.21
PDPN-210ENST00000513143 DUSP9Q99956 384 aaKnown RBP13.73□□□□□ -0.21
PDPN-210ENST00000513143 OSBPL7Q9BZF2 842 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms