RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 CA14Q9ULX7 337 aa15.67■□□□□ 0.1
SPCS3-204ENST00000513139 INPP5FQ9Y2H2 1132 aa15.67■□□□□ 0.1
SPCS3-204ENST00000513139 CLUHO75153 1309 aa15.67■□□□□ 0.1
SPCS3-204ENST00000513139 CCDC195A0A1B0GUA6 201 aa15.66■□□□□ 0.1
SPCS3-204ENST00000513139 ADH1AP07327 375 aa15.66■□□□□ 0.1
SPCS3-204ENST00000513139 SFNP31947 248 aa15.66■□□□□ 0.1
SPCS3-204ENST00000513139 PRR16Q569H4 304 aa15.66■□□□□ 0.1
SPCS3-204ENST00000513139 ZNF280BQ86YH2 543 aa15.66■□□□□ 0.1
SPCS3-204ENST00000513139 SUMF1Q8NBK3 374 aa15.66■□□□□ 0.1
SPCS3-204ENST00000513139 HDAC7Q8WUI4 952 aa15.66■□□□□ 0.1
SPCS3-204ENST00000513139 RIT2Q99578 217 aa15.66■□□□□ 0.1
SPCS3-204ENST00000513139 NIFKQ9BYG3 293 aaKnown RBP15.66■□□□□ 0.1
SPCS3-204ENST00000513139 ZMYND12Q9H0C1 365 aa15.66■□□□□ 0.1
SPCS3-204ENST00000513139 GBP3Q9H0R5 595 aa15.66■□□□□ 0.1
SPCS3-204ENST00000513139 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.66■□□□□ 0.1
SPCS3-204ENST00000513139 PIN4Q9Y237 131 aaKnown RBP15.66■□□□□ 0.1
SPCS3-204ENST00000513139 MAP1BP46821 2468 aaKnown RBP15.65■□□□□ 0.1
SPCS3-204ENST00000513139 A0A087WZ62 844 aa15.65■□□□□ 0.1
SPCS3-204ENST00000513139 IGKV6-21A0A0C4DH24 114 aa15.65■□□□□ 0.1
SPCS3-204ENST00000513139 MEIS3P2A8K0S8 358 aa15.65■□□□□ 0.1
SPCS3-204ENST00000513139 ZBTB43O43298 467 aa15.65■□□□□ 0.1
SPCS3-204ENST00000513139 B4GALT3O60512 393 aa15.65■□□□□ 0.1
SPCS3-204ENST00000513139 SOD2P04179 222 aa15.65■□□□□ 0.1
SPCS3-204ENST00000513139 SSBP05455 408 aaKnown RBP eCLIP15.65■□□□□ 0.1
SPCS3-204ENST00000513139 DCNP07585 359 aaKnown RBP15.65■□□□□ 0.1
SPCS3-204ENST00000513139 SDHBP21912 280 aa15.65■□□□□ 0.1
SPCS3-204ENST00000513139 PLCB2Q00722 1185 aa15.65■□□□□ 0.1
SPCS3-204ENST00000513139 DRP2Q13474 957 aa15.65■□□□□ 0.1
SPCS3-204ENST00000513139 NECTIN1Q15223 517 aa15.65■□□□□ 0.1
SPCS3-204ENST00000513139 LONRF3Q496Y0 759 aa15.65■□□□□ 0.1
SPCS3-204ENST00000513139 REXO1Q8N1G1 1221 aaKnown RBP15.65■□□□□ 0.1
SPCS3-204ENST00000513139 GPR152Q8TDT2 470 aa15.65■□□□□ 0.1
SPCS3-204ENST00000513139 LENG9Q96B70 501 aa15.65■□□□□ 0.1
SPCS3-204ENST00000513139 RPS6KC1Q96S38 1066 aa15.65■□□□□ 0.1
SPCS3-204ENST00000513139 MYADMQ96S97 322 aa15.65■□□□□ 0.1
SPCS3-204ENST00000513139 FDXACB1Q9BRP7 624 aaPredicted RBP15.65■□□□□ 0.1
SPCS3-204ENST00000513139 LSG1Q9H089 658 aaKnown RBP15.65■□□□□ 0.1
SPCS3-204ENST00000513139 ARHGEF3Q9NR81 526 aa15.65■□□□□ 0.1
SPCS3-204ENST00000513139 SLC2A4RGQ9NR83 387 aa15.65■□□□□ 0.1
SPCS3-204ENST00000513139 FAN1Q9Y2M0 1017 aa15.65■□□□□ 0.1
SPCS3-204ENST00000513139 INPPL1O15357 1258 aa15.64■□□□□ 0.09
SPCS3-204ENST00000513139 DDHD2O94830 711 aa15.64■□□□□ 0.09
SPCS3-204ENST00000513139 GLUD1P00367 558 aa15.64■□□□□ 0.09
SPCS3-204ENST00000513139 URODP06132 367 aa15.64■□□□□ 0.09
SPCS3-204ENST00000513139 JAK3P52333 1124 aa15.64■□□□□ 0.09
SPCS3-204ENST00000513139 RCAN1P53805 252 aa15.64■□□□□ 0.09
SPCS3-204ENST00000513139 UGCGQ16739 394 aa15.64■□□□□ 0.09
SPCS3-204ENST00000513139 PFKFB3Q16875 520 aaPredicted RBP15.64■□□□□ 0.09
SPCS3-204ENST00000513139 ZNF528Q3MIS6 628 aa15.64■□□□□ 0.09
SPCS3-204ENST00000513139 SPECC1Q5M775 1068 aa15.64■□□□□ 0.09
SPCS3-204ENST00000513139 CREB3L3Q68CJ9 461 aa15.64■□□□□ 0.09
SPCS3-204ENST00000513139 AGMOQ6ZNB7 445 aa15.64■□□□□ 0.09
SPCS3-204ENST00000513139 MRPL10Q7Z7H8 261 aaKnown RBP15.64■□□□□ 0.09
SPCS3-204ENST00000513139 GPR161Q8N6U8 529 aaKnown RBP15.64■□□□□ 0.09
SPCS3-204ENST00000513139 RDM1Q8NG50 284 aa15.64■□□□□ 0.09
SPCS3-204ENST00000513139 CCDC12Q8WUD4 166 aaPredicted RBP15.64■□□□□ 0.09
SPCS3-204ENST00000513139 FAM193BQ96PV7 902 aaPredicted RBP15.64■□□□□ 0.09
SPCS3-204ENST00000513139 CEP89Q96ST8 783 aa15.64■□□□□ 0.09
SPCS3-204ENST00000513139 C6orf50Q9HD87 102 aa15.64■□□□□ 0.09
SPCS3-204ENST00000513139 PCDHB2Q9Y5E7 798 aa15.64■□□□□ 0.09
SPCS3-204ENST00000513139 CNTNAP2Q9UHC6 1331 aa15.64■□□□□ 0.09
SPCS3-204ENST00000513139 CHD8Q9HCK8 2581 aa15.64■□□□□ 0.09
SPCS3-204ENST00000513139 ANHXE9PGG2 379 aa15.63■□□□□ 0.09
SPCS3-204ENST00000513139 NRP1O14786 923 aa15.63■□□□□ 0.09
SPCS3-204ENST00000513139 TEX28O15482 410 aa15.63■□□□□ 0.09
SPCS3-204ENST00000513139 KINO60870 393 aaKnown RBP15.63■□□□□ 0.09
SPCS3-204ENST00000513139 LAMP2P13473 410 aa15.63■□□□□ 0.09
SPCS3-204ENST00000513139 GNA11P29992 359 aa15.63■□□□□ 0.09
SPCS3-204ENST00000513139 AK2P54819 239 aa15.63■□□□□ 0.09
SPCS3-204ENST00000513139 STARD6P59095 220 aa15.63■□□□□ 0.09
SPCS3-204ENST00000513139 RSPO4Q2I0M5 234 aaPredicted RBP15.63■□□□□ 0.09
SPCS3-204ENST00000513139 XKR3Q5GH77 459 aa15.63■□□□□ 0.09
SPCS3-204ENST00000513139 DCLRE1AQ6PJP8 1040 aa15.63■□□□□ 0.09
SPCS3-204ENST00000513139 CATSPER4Q7RTX7 472 aa15.63■□□□□ 0.09
SPCS3-204ENST00000513139 DCLK2Q8N568 766 aa15.63■□□□□ 0.09
SPCS3-204ENST00000513139 ZNF579Q8NAF0 562 aaKnown RBP15.63■□□□□ 0.09
SPCS3-204ENST00000513139 PJA1Q8NG27 643 aa15.63■□□□□ 0.09
SPCS3-204ENST00000513139 SMG7Q92540 1137 aaKnown RBP15.63■□□□□ 0.09
SPCS3-204ENST00000513139 ZNF707Q96C28 371 aaPredicted RBP15.63■□□□□ 0.09
SPCS3-204ENST00000513139 SHDQ96IW2 340 aa15.63■□□□□ 0.09
SPCS3-204ENST00000513139 CNTNAP3BQ96NU0 1288 aa15.63■□□□□ 0.09
SPCS3-204ENST00000513139 HERC2P3Q9BVR0 1158 aa15.63■□□□□ 0.09
SPCS3-204ENST00000513139 CNTNAP3Q9BZ76 1288 aa15.63■□□□□ 0.09
SPCS3-204ENST00000513139 PLEKHA4Q9H4M7 779 aa15.63■□□□□ 0.09
SPCS3-204ENST00000513139 RSAD1Q9HA92 442 aa15.63■□□□□ 0.09
SPCS3-204ENST00000513139 RXFP1Q9HBX9 757 aa15.63■□□□□ 0.09
SPCS3-204ENST00000513139 FAM217BQ9NTX9 383 aaPredicted RBP15.63■□□□□ 0.09
SPCS3-204ENST00000513139 BRPF3Q9ULD4 1205 aa15.63■□□□□ 0.09
SPCS3-204ENST00000513139 PCDHB13Q9Y5F0 798 aa15.63■□□□□ 0.09
SPCS3-204ENST00000513139 ZFP37Q9Y6Q3 630 aaPredicted RBP15.63■□□□□ 0.09
SPCS3-204ENST00000513139 C2CD2LO14523 706 aa15.62■□□□□ 0.09
SPCS3-204ENST00000513139 SPTLC1O15269 473 aa15.62■□□□□ 0.09
SPCS3-204ENST00000513139 MSH4O15457 936 aa15.62■□□□□ 0.09
SPCS3-204ENST00000513139 GAS7O60861 476 aa15.62■□□□□ 0.09
SPCS3-204ENST00000513139 KRT37O76014 449 aa15.62■□□□□ 0.09
SPCS3-204ENST00000513139 EFEMP2O95967 443 aa15.62■□□□□ 0.09
SPCS3-204ENST00000513139 EXOSC10Q01780 885 aaKnown RBP15.62■□□□□ 0.09
SPCS3-204ENST00000513139 HTR4Q13639 388 aa15.62■□□□□ 0.09
SPCS3-204ENST00000513139 MTERF2Q49AM1 385 aa15.62■□□□□ 0.09
SPCS3-204ENST00000513139 KIAA0319Q5VV43 1072 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms