RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 IFIT1BQ5T764 474 aaKnown RBP5.4□□□□□ -1.54
HTT-210ENST00000512909 KANK2Q63ZY3 851 aa5.4□□□□□ -1.54
HTT-210ENST00000512909 TMEM200BQ69YZ2 307 aa5.4□□□□□ -1.54
HTT-210ENST00000512909 PPP4R3AQ6IN85 833 aa5.4□□□□□ -1.54
HTT-210ENST00000512909 CARFQ8N187 725 aa5.4□□□□□ -1.54
HTT-210ENST00000512909 CBARPQ8N350 705 aaPredicted RBP5.4□□□□□ -1.54
HTT-210ENST00000512909 KLHL36Q8N4N3 616 aa5.4□□□□□ -1.54
HTT-210ENST00000512909 CPA6Q8N4T0 437 aa5.4□□□□□ -1.54
HTT-210ENST00000512909 ZNF526Q8TF50 670 aaPredicted RBP5.4□□□□□ -1.54
HTT-210ENST00000512909 LPPQ93052 612 aa5.4□□□□□ -1.54
HTT-210ENST00000512909 SLC2A13Q96QE2 648 aa5.4□□□□□ -1.54
HTT-210ENST00000512909 PITHD1Q9GZP4 211 aaPredicted RBP5.4□□□□□ -1.54
HTT-210ENST00000512909 JADE2Q9NQC1 790 aa5.4□□□□□ -1.54
HTT-210ENST00000512909 NCDNQ9UBB6 729 aa5.4□□□□□ -1.54
HTT-210ENST00000512909 PNMA8BQ9ULN7 279 aaPredicted RBP5.4□□□□□ -1.54
HTT-210ENST00000512909 WASF3Q9UPY6 502 aa5.4□□□□□ -1.54
HTT-210ENST00000512909 VWA7Q9Y334 891 aa5.4□□□□□ -1.54
HTT-210ENST00000512909 PCDHGA2Q9Y5H1 932 aa5.4□□□□□ -1.54
HTT-210ENST00000512909 GLI2P10070 1586 aa5.4□□□□□ -1.55
HTT-210ENST00000512909 KIF21BO75037 1637 aa5.4□□□□□ -1.55
HTT-210ENST00000512909 RAPGEF6Q8TEU7 1601 aa5.4□□□□□ -1.55
HTT-210ENST00000512909 NUP153P49790 1475 aaKnown RBP5.39□□□□□ -1.55
HTT-210ENST00000512909 ARHGAP35Q9NRY4 1499 aa5.39□□□□□ -1.55
HTT-210ENST00000512909 KRTAP4-8A0A0G2JLE6 195 aa5.39□□□□□ -1.55
HTT-210ENST00000512909 C9orf118A6NHY6 69 aa5.39□□□□□ -1.55
HTT-210ENST00000512909 TSPAN6O43657 245 aa5.39□□□□□ -1.55
HTT-210ENST00000512909 AKR1B10O60218 316 aa5.39□□□□□ -1.55
HTT-210ENST00000512909 PHF2O75151 1096 aa5.39□□□□□ -1.55
HTT-210ENST00000512909 NDUFS2O75306 463 aa5.39□□□□□ -1.55
HTT-210ENST00000512909 MAFO75444 373 aaPredicted RBP5.39□□□□□ -1.55
HTT-210ENST00000512909 OFD1O75665 1012 aa5.39□□□□□ -1.55
HTT-210ENST00000512909 PARNO95453 639 aaKnown RBP5.39□□□□□ -1.55
HTT-210ENST00000512909 SCGB1D2O95969 90 aa5.39□□□□□ -1.55
HTT-210ENST00000512909 KCNC1P48547 511 aa5.39□□□□□ -1.55
HTT-210ENST00000512909 HTRA3P83110 453 aa5.39□□□□□ -1.55
HTT-210ENST00000512909 CAP1Q01518 475 aa5.39□□□□□ -1.55
HTT-210ENST00000512909 NFE2Q16621 373 aaPredicted RBP5.39□□□□□ -1.55
HTT-210ENST00000512909 INAVAQ3KP66 663 aa5.39□□□□□ -1.55
HTT-210ENST00000512909 FAM26FQ5R3K3 315 aa5.39□□□□□ -1.55
HTT-210ENST00000512909 BTNL9Q6UXG8 535 aa5.39□□□□□ -1.55
HTT-210ENST00000512909 Q6ZUG5 572 aa5.39□□□□□ -1.55
HTT-210ENST00000512909 MIGA2Q7L4E1 593 aa5.39□□□□□ -1.55
HTT-210ENST00000512909 PLEKHH3Q7Z736 793 aa5.39□□□□□ -1.55
HTT-210ENST00000512909 POU5F2Q8N7G0 328 aa5.39□□□□□ -1.55
HTT-210ENST00000512909 TXNDC5Q8NBS9 432 aaKnown RBP5.39□□□□□ -1.55
HTT-210ENST00000512909 NUDT10Q8NFP7 164 aa5.39□□□□□ -1.55
HTT-210ENST00000512909 ZCCHC14Q8WYQ9 949 aaKnown RBP5.39□□□□□ -1.55
HTT-210ENST00000512909 JADE3Q92613 823 aa5.39□□□□□ -1.55
HTT-210ENST00000512909 NUDT11Q96G61 164 aa5.39□□□□□ -1.55
HTT-210ENST00000512909 LRGUKQ96M69 825 aa5.39□□□□□ -1.55
HTT-210ENST00000512909 CAMKK2Q96RR4 588 aa5.39□□□□□ -1.55
HTT-210ENST00000512909 OSBPL6Q9BZF3 934 aa5.39□□□□□ -1.55
HTT-210ENST00000512909 CDH19Q9H159 772 aa5.39□□□□□ -1.55
HTT-210ENST00000512909 EPC1Q9H2F5 836 aa5.39□□□□□ -1.55
HTT-210ENST00000512909 SPATA6Q9NWH7 488 aaPredicted RBP5.39□□□□□ -1.55
HTT-210ENST00000512909 CFDP1Q9UEE9 299 aaPredicted RBP5.39□□□□□ -1.55
HTT-210ENST00000512909 THRAP3Q9Y2W1 955 aaKnown RBP5.39□□□□□ -1.55
HTT-210ENST00000512909 AKNAQ7Z591 1439 aa5.39□□□□□ -1.55
HTT-210ENST00000512909 CDK13Q14004 1512 aaKnown RBP5.38□□□□□ -1.55
HTT-210ENST00000512909 FAM171A2A8MVW0 826 aa5.38□□□□□ -1.55
HTT-210ENST00000512909 GSPT1P15170 499 aaKnown RBP5.38□□□□□ -1.55
HTT-210ENST00000512909 MTNR1BP49286 362 aa5.38□□□□□ -1.55
HTT-210ENST00000512909 MRE11P49959 708 aa5.38□□□□□ -1.55
HTT-210ENST00000512909 TOP3AQ13472 1001 aaPredicted RBP5.38□□□□□ -1.55
HTT-210ENST00000512909 TRIM25Q14258 630 aaKnown RBP5.38□□□□□ -1.55
HTT-210ENST00000512909 MLC1Q15049 377 aa5.38□□□□□ -1.55
HTT-210ENST00000512909 EIF4HQ15056 248 aaKnown RBP5.38□□□□□ -1.55
HTT-210ENST00000512909 PCOLCEQ15113 449 aa5.38□□□□□ -1.55
HTT-210ENST00000512909 NOMO1Q15155 1222 aa5.38□□□□□ -1.55
HTT-210ENST00000512909 VMACQ2NL98 169 aa5.38□□□□□ -1.55
HTT-210ENST00000512909 GFOD2Q3B7J2 385 aa5.38□□□□□ -1.55
HTT-210ENST00000512909 MINDY4Q4G0A6 757 aa5.38□□□□□ -1.55
HTT-210ENST00000512909 CXorf57Q6NSI4 855 aaKnown RBP5.38□□□□□ -1.55
HTT-210ENST00000512909 CCAR1Q8IX12 1150 aaKnown RBP5.38□□□□□ -1.55
HTT-210ENST00000512909 SP8Q8IXZ3 490 aa5.38□□□□□ -1.55
HTT-210ENST00000512909 THEMISQ8N1K5 641 aaPredicted RBP5.38□□□□□ -1.55
HTT-210ENST00000512909 ADAMTS17Q8TE56 1095 aa5.38□□□□□ -1.55
HTT-210ENST00000512909 HDAC10Q969S8 669 aa5.38□□□□□ -1.55
HTT-210ENST00000512909 CLIP3Q96DZ5 547 aa5.38□□□□□ -1.55
HTT-210ENST00000512909 ORAI2Q96SN7 254 aa5.38□□□□□ -1.55
HTT-210ENST00000512909 NUP88Q99567 741 aaPredicted RBP5.38□□□□□ -1.55
HTT-210ENST00000512909 C7orf25Q9BPX7 421 aa5.38□□□□□ -1.55
HTT-210ENST00000512909 C12orf65Q9H3J6 166 aaKnown RBP5.38□□□□□ -1.55
HTT-210ENST00000512909 GREM2Q9H772 168 aa5.38□□□□□ -1.55
HTT-210ENST00000512909 C14orf93Q9H972 538 aaKnown RBP5.38□□□□□ -1.55
HTT-210ENST00000512909 CD320Q9NPF0 282 aa5.38□□□□□ -1.55
HTT-210ENST00000512909 GEMIN8Q9NWZ8 242 aaKnown RBP5.38□□□□□ -1.55
HTT-210ENST00000512909 RBM8AQ9Y5S9 174 aaKnown RBP5.38□□□□□ -1.55
HTT-210ENST00000512909 MTUS2Q5JR59 1369 aa5.38□□□□□ -1.55
HTT-210ENST00000512909 SCAPERQ9BY12 1400 aa5.38□□□□□ -1.55
HTT-210ENST00000512909 EFCAB5A4FU69 1503 aa5.38□□□□□ -1.55
HTT-210ENST00000512909 MAGI3Q5TCQ9 1506 aa5.38□□□□□ -1.55
HTT-210ENST00000512909 SAMD9Q5K651 1589 aa5.38□□□□□ -1.55
HTT-210ENST00000512909 SH3D21A4FU49 640 aa5.37□□□□□ -1.55
HTT-210ENST00000512909 MROH6A6NGR9 719 aa5.37□□□□□ -1.55
HTT-210ENST00000512909 KIF3BO15066 747 aa5.37□□□□□ -1.55
HTT-210ENST00000512909 RFPL1O75677 317 aa5.37□□□□□ -1.55
HTT-210ENST00000512909 SASH1O94885 1247 aa5.37□□□□□ -1.55
HTT-210ENST00000512909 LTA4HP09960 611 aaKnown RBP5.37□□□□□ -1.55
HTT-210ENST00000512909 ECHS1P30084 290 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms