RNA–Protein interactions for RNA: ENST00000512617.6

PVT1-202, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 383 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-202ENST00000512617 ZNF287Q9HBT7 754 aa3.7□□□□□ -1.82
PVT1-202ENST00000512617 TRMT1Q9NXH9 659 aaKnown RBP3.7□□□□□ -1.82
PVT1-202ENST00000512617 KCTD5Q9NXV2 234 aa3.7□□□□□ -1.82
PVT1-202ENST00000512617 CGGBP1Q9UFW8 167 aaPredicted RBP3.7□□□□□ -1.82
PVT1-202ENST00000512617 SH3BGRL2Q9UJC5 107 aa3.7□□□□□ -1.82
PVT1-202ENST00000512617 MOSPD1Q9UJG1 213 aa3.7□□□□□ -1.82
PVT1-202ENST00000512617 TUBD1Q9UJT1 453 aa3.7□□□□□ -1.82
PVT1-202ENST00000512617 SLC39A10Q9ULF5 831 aa3.7□□□□□ -1.82
PVT1-202ENST00000512617 SNX8Q9Y5X2 465 aa3.7□□□□□ -1.82
PVT1-202ENST00000512617 ABCA8O94911 1581 aa3.7□□□□□ -1.82
PVT1-202ENST00000512617 PPRC1Q5VV67 1664 aaKnown RBP3.7□□□□□ -1.82
PVT1-202ENST00000512617 FLT1P17948 1338 aa3.7□□□□□ -1.82
PVT1-202ENST00000512617 SAMD9Q5K651 1589 aa3.69□□□□□ -1.82
PVT1-202ENST00000512617 PLB1Q6P1J6 1458 aa3.69□□□□□ -1.82
PVT1-202ENST00000512617 LRRC14BA6NHZ5 514 aa3.69□□□□□ -1.82
PVT1-202ENST00000512617 FIGNL2A6NMB9 653 aa3.69□□□□□ -1.82
PVT1-202ENST00000512617 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.69□□□□□ -1.82
PVT1-202ENST00000512617 PI4K2BG5E9Z4 385 aa3.69□□□□□ -1.82
PVT1-202ENST00000512617 STXBP3O00186 592 aa3.69□□□□□ -1.82
PVT1-202ENST00000512617 ELL2O00472 640 aaPredicted RBP3.69□□□□□ -1.82
PVT1-202ENST00000512617 GSTA4O15217 222 aa3.69□□□□□ -1.82
PVT1-202ENST00000512617 SLC7A4O43246 635 aa3.69□□□□□ -1.82
PVT1-202ENST00000512617 TSPAN3O60637 253 aa3.69□□□□□ -1.82
PVT1-202ENST00000512617 TPPPO94811 219 aa3.69□□□□□ -1.82
PVT1-202ENST00000512617 UBOX5O94941 541 aa3.69□□□□□ -1.82
PVT1-202ENST00000512617 CHGBP05060 677 aa3.69□□□□□ -1.82
PVT1-202ENST00000512617 SCG5P05408 212 aa3.69□□□□□ -1.82
PVT1-202ENST00000512617 SRGAP2BP0DMP2 458 aa3.69□□□□□ -1.82
PVT1-202ENST00000512617 HOXD8P13378 290 aaPredicted RBP3.69□□□□□ -1.82
PVT1-202ENST00000512617 NFKB1P19838 968 aa3.69□□□□□ -1.82
PVT1-202ENST00000512617 MTNR1BP49286 362 aa3.69□□□□□ -1.82
PVT1-202ENST00000512617 ETF1P62495 437 aaKnown RBP3.69□□□□□ -1.82
PVT1-202ENST00000512617 ST5P78524 1137 aa3.69□□□□□ -1.82
PVT1-202ENST00000512617 IFI35P80217 286 aaPredicted RBP3.69□□□□□ -1.82
PVT1-202ENST00000512617 LRRC74AQ0VAA2 488 aa3.69□□□□□ -1.82
PVT1-202ENST00000512617 COX10Q12887 443 aa3.69□□□□□ -1.82
PVT1-202ENST00000512617 LRMPQ12912 555 aa3.69□□□□□ -1.82
PVT1-202ENST00000512617 PAK1Q13153 545 aa3.69□□□□□ -1.82
PVT1-202ENST00000512617 ADAM15Q13444 863 aa3.69□□□□□ -1.82
PVT1-202ENST00000512617 PPA1Q15181 289 aa3.69□□□□□ -1.82
PVT1-202ENST00000512617 ZNF174Q15697 407 aa3.69□□□□□ -1.82
PVT1-202ENST00000512617 ANKRD39Q53RE8 183 aa3.69□□□□□ -1.82
PVT1-202ENST00000512617 C1orf141Q5JVX7 400 aa3.69□□□□□ -1.82
PVT1-202ENST00000512617 FAM26FQ5R3K3 315 aa3.69□□□□□ -1.82
PVT1-202ENST00000512617 RAB12Q6IQ22 244 aa3.69□□□□□ -1.82
PVT1-202ENST00000512617 ACAD10Q6JQN1 1059 aa3.69□□□□□ -1.82
PVT1-202ENST00000512617 IRGCQ6NXR0 463 aa3.69□□□□□ -1.82
PVT1-202ENST00000512617 IL27RAQ6UWB1 636 aa3.69□□□□□ -1.82
PVT1-202ENST00000512617 BTNL9Q6UXG8 535 aa3.69□□□□□ -1.82
PVT1-202ENST00000512617 ZNF783Q6ZMS7 281 aa3.69□□□□□ -1.82
PVT1-202ENST00000512617 FRMD7Q6ZUT3 714 aa3.69□□□□□ -1.82
PVT1-202ENST00000512617 Q6ZVU0 165 aa3.69□□□□□ -1.82
PVT1-202ENST00000512617 CHD1LQ86WJ1 897 aa3.69□□□□□ -1.82
PVT1-202ENST00000512617 CEP97Q8IW35 865 aa3.69□□□□□ -1.82
PVT1-202ENST00000512617 RPAP2Q8IXW5 612 aaPredicted RBP3.69□□□□□ -1.82
PVT1-202ENST00000512617 LRRC71Q8N4P6 559 aa3.69□□□□□ -1.82
PVT1-202ENST00000512617 CISD2Q8N5K1 135 aaKnown RBP3.69□□□□□ -1.82
PVT1-202ENST00000512617 TMCO5AQ8N6Q1 288 aa3.69□□□□□ -1.82
PVT1-202ENST00000512617 RNF152Q8N8N0 203 aa3.69□□□□□ -1.82
PVT1-202ENST00000512617 TTLL11Q8NHH1 800 aa3.69□□□□□ -1.82
PVT1-202ENST00000512617 SPPL3Q8TCT6 385 aa3.69□□□□□ -1.82
PVT1-202ENST00000512617 RIN2Q8WYP3 895 aaPredicted RBP3.69□□□□□ -1.82
PVT1-202ENST00000512617 RILPL2Q969X0 211 aa3.69□□□□□ -1.82
PVT1-202ENST00000512617 KIF1BPQ96EK5 621 aa3.69□□□□□ -1.82
PVT1-202ENST00000512617 RBM18Q96H35 190 aaKnown RBP3.69□□□□□ -1.82
PVT1-202ENST00000512617 C7orf25Q9BPX7 421 aa3.69□□□□□ -1.82
PVT1-202ENST00000512617 HEPHQ9BQS7 1158 aa3.69□□□□□ -1.82
PVT1-202ENST00000512617 MXD3Q9BW11 206 aa3.69□□□□□ -1.82
PVT1-202ENST00000512617 USP26Q9BXU7 913 aa3.69□□□□□ -1.82
PVT1-202ENST00000512617 ZCCHC2Q9C0B9 1178 aaKnown RBP3.69□□□□□ -1.82
PVT1-202ENST00000512617 ACAD9Q9H845 621 aa3.69□□□□□ -1.82
PVT1-202ENST00000512617 KCND1Q9NSA2 647 aa3.69□□□□□ -1.82
PVT1-202ENST00000512617 WBP1LQ9NX94 342 aa3.69□□□□□ -1.82
PVT1-202ENST00000512617 CACNA2D2Q9NY47 1150 aa3.69□□□□□ -1.82
PVT1-202ENST00000512617 CTNNA3Q9UI47 895 aa3.69□□□□□ -1.82
PVT1-202ENST00000512617 PCDHGB4Q9UN71 923 aa3.69□□□□□ -1.82
PVT1-202ENST00000512617 DUSP12Q9UNI6 340 aa3.69□□□□□ -1.82
PVT1-202ENST00000512617 TMEM5Q9Y2B1 443 aa3.69□□□□□ -1.82
PVT1-202ENST00000512617 SPO11Q9Y5K1 396 aa3.69□□□□□ -1.82
PVT1-202ENST00000512617 ATP23Q9Y6H3 246 aa3.69□□□□□ -1.82
PVT1-202ENST00000512617 ZCCHC11Q5TAX3 1644 aaKnown RBP3.69□□□□□ -1.82
PVT1-202ENST00000512617 EPRSP07814 1512 aaKnown RBP3.69□□□□□ -1.82
PVT1-202ENST00000512617 GOLGA3Q08378 1498 aa3.68□□□□□ -1.82
PVT1-202ENST00000512617 A0A1W2PPC4 97 aa3.68□□□□□ -1.82
PVT1-202ENST00000512617 DCDC2CA8MYV0 355 aa3.68□□□□□ -1.82
PVT1-202ENST00000512617 FAM25EA8MYX2 175 aa3.68□□□□□ -1.82
PVT1-202ENST00000512617 F8W031 263 aaPredicted RBP3.68□□□□□ -1.82
PVT1-202ENST00000512617 TK2O00142 265 aa3.68□□□□□ -1.82
PVT1-202ENST00000512617 WNT7AO00755 349 aa3.68□□□□□ -1.82
PVT1-202ENST00000512617 FSCN2O14926 492 aa3.68□□□□□ -1.82
PVT1-202ENST00000512617 MUSKO15146 869 aa3.68□□□□□ -1.82
PVT1-202ENST00000512617 IPO8O15397 1037 aaKnown RBP3.68□□□□□ -1.82
PVT1-202ENST00000512617 ARHGAP6O43182 974 aa3.68□□□□□ -1.82
PVT1-202ENST00000512617 MTSS1O43312 755 aa3.68□□□□□ -1.82
PVT1-202ENST00000512617 HRO43593 1189 aa3.68□□□□□ -1.82
PVT1-202ENST00000512617 PTP4A3O75365 173 aa3.68□□□□□ -1.82
PVT1-202ENST00000512617 DGKIO75912 1065 aa3.68□□□□□ -1.82
PVT1-202ENST00000512617 TSPAN9O75954 239 aa3.68□□□□□ -1.82
PVT1-202ENST00000512617 TMEM63AO94886 807 aa3.68□□□□□ -1.82
PVT1-202ENST00000512617 SLU7O95391 586 aaKnown RBP3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms