RNA–Protein interactions for RNA: ENST00000512454.5

EXOSC9-211, Transcript of exosome component 9, humanhuman

TSL 1 (best) BASIC

Gene EXOSC9, Length 1,543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-211ENST00000512454 KNOP1Q1ED39 458 aaKnown RBP9.56□□□□□ -0.88
EXOSC9-211ENST00000512454 KIAA0753Q2KHM9 967 aa9.56□□□□□ -0.88
EXOSC9-211ENST00000512454 ZCWPW2Q504Y3 356 aa9.56□□□□□ -0.88
EXOSC9-211ENST00000512454 GNASQ5JWF2 1037 aa9.56□□□□□ -0.88
EXOSC9-211ENST00000512454 SARM1Q6SZW1 724 aa9.56□□□□□ -0.88
EXOSC9-211ENST00000512454 RETREG2Q8NC44 543 aa9.56□□□□□ -0.88
EXOSC9-211ENST00000512454 ZNF507Q8TCN5 953 aa9.56□□□□□ -0.88
EXOSC9-211ENST00000512454 ANP32BQ92688 251 aaKnown RBP9.56□□□□□ -0.88
EXOSC9-211ENST00000512454 KCNN1Q92952 543 aa9.56□□□□□ -0.88
EXOSC9-211ENST00000512454 IFT74Q96LB3 600 aa9.56□□□□□ -0.88
EXOSC9-211ENST00000512454 KCTD10Q9H3F6 313 aa9.56□□□□□ -0.88
EXOSC9-211ENST00000512454 SEMA6BQ9H3T3 888 aa9.56□□□□□ -0.88
EXOSC9-211ENST00000512454 KMT5AQ9NQR1 393 aa9.56□□□□□ -0.88
EXOSC9-211ENST00000512454 FANCLQ9NW38 375 aa9.56□□□□□ -0.88
EXOSC9-211ENST00000512454 DDX20Q9UHI6 824 aaKnown RBP9.56□□□□□ -0.88
EXOSC9-211ENST00000512454 PTCH2Q9Y6C5 1203 aa9.56□□□□□ -0.88
EXOSC9-211ENST00000512454 ZMYM2Q9UBW7 1377 aa9.55□□□□□ -0.88
EXOSC9-211ENST00000512454 NRCAMQ92823 1304 aa9.55□□□□□ -0.88
EXOSC9-211ENST00000512454 MYADML2A6NDP7 307 aa9.55□□□□□ -0.88
EXOSC9-211ENST00000512454 HAS3O00219 553 aa9.55□□□□□ -0.88
EXOSC9-211ENST00000512454 SLC16A4O15374 487 aa9.55□□□□□ -0.88
EXOSC9-211ENST00000512454 PGK1P00558 417 aa9.55□□□□□ -0.88
EXOSC9-211ENST00000512454 HOXD13P35453 343 aa9.55□□□□□ -0.88
EXOSC9-211ENST00000512454 NAMPTP43490 491 aa9.55□□□□□ -0.88
EXOSC9-211ENST00000512454 DNM2P50570 870 aa9.55□□□□□ -0.88
EXOSC9-211ENST00000512454 GTF2BQ00403 316 aa9.55□□□□□ -0.88
EXOSC9-211ENST00000512454 MXD4Q14582 209 aaPredicted RBP9.55□□□□□ -0.88
EXOSC9-211ENST00000512454 GRIK4Q16099 956 aa9.55□□□□□ -0.88
EXOSC9-211ENST00000512454 EDRF1Q3B7T1 1238 aa9.55□□□□□ -0.88
EXOSC9-211ENST00000512454 ZC2HC1CQ53FD0 456 aaPredicted RBP9.55□□□□□ -0.88
EXOSC9-211ENST00000512454 CDKAL1Q5VV42 579 aa9.55□□□□□ -0.88
EXOSC9-211ENST00000512454 IER5Q5VY09 327 aa9.55□□□□□ -0.88
EXOSC9-211ENST00000512454 ANKRD40Q6AI12 368 aa9.55□□□□□ -0.88
EXOSC9-211ENST00000512454 HAUS6Q7Z4H7 955 aa9.55□□□□□ -0.88
EXOSC9-211ENST00000512454 NELFCDQ8IXH7 590 aa9.55□□□□□ -0.88
EXOSC9-211ENST00000512454 CYP4X1Q8N118 509 aa9.55□□□□□ -0.88
EXOSC9-211ENST00000512454 CSGALNACT2Q8N6G5 542 aa9.55□□□□□ -0.88
EXOSC9-211ENST00000512454 TMEM161BQ8NDZ6 487 aa9.55□□□□□ -0.88
EXOSC9-211ENST00000512454 TRAPPC12Q8WVT3 735 aa9.55□□□□□ -0.88
EXOSC9-211ENST00000512454 PSPC1Q8WXF1 523 aaKnown RBP9.55□□□□□ -0.88
EXOSC9-211ENST00000512454 BSNDQ8WZ55 320 aa9.55□□□□□ -0.88
EXOSC9-211ENST00000512454 TMEM143Q96AN5 459 aa9.55□□□□□ -0.88
EXOSC9-211ENST00000512454 HVCN1Q96D96 273 aa9.55□□□□□ -0.88
EXOSC9-211ENST00000512454 TSG101Q99816 390 aa9.55□□□□□ -0.88
EXOSC9-211ENST00000512454 ARHGAP28Q9P2N2 729 aa9.55□□□□□ -0.88
EXOSC9-211ENST00000512454 ANK1P16157 1881 aa9.55□□□□□ -0.88
EXOSC9-211ENST00000512454 MBLAC1A4D2B0 266 aaPredicted RBP9.54□□□□□ -0.88
EXOSC9-211ENST00000512454 RRN3P2A6NIE6 340 aa9.54□□□□□ -0.88
EXOSC9-211ENST00000512454 CCDC169A6NNP5 214 aa9.54□□□□□ -0.88
EXOSC9-211ENST00000512454 PDXKO00764 312 aa9.54□□□□□ -0.88
EXOSC9-211ENST00000512454 PRPF6O94906 941 aaKnown RBP9.54□□□□□ -0.88
EXOSC9-211ENST00000512454 MYL3P08590 195 aa9.54□□□□□ -0.88
EXOSC9-211ENST00000512454 SMIM10L2AP0DMW4 78 aa9.54□□□□□ -0.88
EXOSC9-211ENST00000512454 SMIM10L2BP0DMW5 78 aa9.54□□□□□ -0.88
EXOSC9-211ENST00000512454 ATP1A3P13637 1013 aa9.54□□□□□ -0.88
EXOSC9-211ENST00000512454 GLRA2P23416 452 aa9.54□□□□□ -0.88
EXOSC9-211ENST00000512454 TMOD1P28289 359 aa9.54□□□□□ -0.88
EXOSC9-211ENST00000512454 SPAG1Q07617 926 aa9.54□□□□□ -0.88
EXOSC9-211ENST00000512454 KCNA1Q09470 495 aa9.54□□□□□ -0.88
EXOSC9-211ENST00000512454 MARCH8Q5T0T0 291 aa9.54□□□□□ -0.88
EXOSC9-211ENST00000512454 EFCAB12Q6NXP0 572 aa9.54□□□□□ -0.88
EXOSC9-211ENST00000512454 MTHFD1LQ6UB35 978 aa9.54□□□□□ -0.88
EXOSC9-211ENST00000512454 METTL13Q8N6R0 699 aa9.54□□□□□ -0.88
EXOSC9-211ENST00000512454 PCSK9Q8NBP7 692 aaKnown RBP9.54□□□□□ -0.88
EXOSC9-211ENST00000512454 KLHDC9Q8NEP7 349 aa9.54□□□□□ -0.88
EXOSC9-211ENST00000512454 GOLGA5Q8TBA6 731 aa9.54□□□□□ -0.88
EXOSC9-211ENST00000512454 ASAP3Q8TDY4 903 aa9.54□□□□□ -0.88
EXOSC9-211ENST00000512454 NOC3LQ8WTT2 800 aaKnown RBP9.54□□□□□ -0.88
EXOSC9-211ENST00000512454 LMBR1Q8WVP7 490 aa9.54□□□□□ -0.88
EXOSC9-211ENST00000512454 DUSP9Q99956 384 aaKnown RBP9.54□□□□□ -0.88
EXOSC9-211ENST00000512454 THAP9Q9H5L6 903 aa9.54□□□□□ -0.88
EXOSC9-211ENST00000512454 TMEM206Q9H813 350 aa9.54□□□□□ -0.88
EXOSC9-211ENST00000512454 SUGCTQ9HAC7 445 aa9.54□□□□□ -0.88
EXOSC9-211ENST00000512454 HMX1Q9NP08 348 aaPredicted RBP9.54□□□□□ -0.88
EXOSC9-211ENST00000512454 SAMSN1Q9NSI8 373 aaKnown RBP9.54□□□□□ -0.88
EXOSC9-211ENST00000512454 TYW1Q9NV66 732 aaKnown RBP9.54□□□□□ -0.88
EXOSC9-211ENST00000512454 TRAF3IP3Q9Y228 551 aa9.54□□□□□ -0.88
EXOSC9-211ENST00000512454 PTPN22Q9Y2R2 807 aa9.54□□□□□ -0.88
EXOSC9-211ENST00000512454 TRIP11Q15643 1979 aa9.54□□□□□ -0.88
EXOSC9-211ENST00000512454 ADGRA3Q8IWK6 1321 aa9.53□□□□□ -0.88
EXOSC9-211ENST00000512454 DENND3A2RUS2 1198 aa9.53□□□□□ -0.88
EXOSC9-211ENST00000512454 CALUO43852 315 aaPredicted RBP9.53□□□□□ -0.88
EXOSC9-211ENST00000512454 FGFR1OPO95684 399 aaKnown RBP9.53□□□□□ -0.88
EXOSC9-211ENST00000512454 CD46P15529 392 aa9.53□□□□□ -0.88
EXOSC9-211ENST00000512454 EEF1GP26641 437 aaKnown RBP9.53□□□□□ -0.88
EXOSC9-211ENST00000512454 KLRC1P26715 233 aa9.53□□□□□ -0.88
EXOSC9-211ENST00000512454 HOXC8P31273 242 aa9.53□□□□□ -0.88
EXOSC9-211ENST00000512454 EFNA5P52803 228 aa9.53□□□□□ -0.88
EXOSC9-211ENST00000512454 IGBP1P78318 339 aa9.53□□□□□ -0.88
EXOSC9-211ENST00000512454 FKBP3Q00688 224 aaKnown RBP9.53□□□□□ -0.88
EXOSC9-211ENST00000512454 LAMTOR4Q0VGL1 99 aa9.53□□□□□ -0.88
EXOSC9-211ENST00000512454 DRP2Q13474 957 aa9.53□□□□□ -0.88
EXOSC9-211ENST00000512454 CAPSQ13938 189 aa9.53□□□□□ -0.88
EXOSC9-211ENST00000512454 CDCA2Q69YH5 1023 aaPredicted RBP9.53□□□□□ -0.88
EXOSC9-211ENST00000512454 CCSAPQ6IQ19 270 aaPredicted RBP9.53□□□□□ -0.88
EXOSC9-211ENST00000512454 NFRKBQ6P4R8 1299 aa9.53□□□□□ -0.88
EXOSC9-211ENST00000512454 LRRC55Q6ZSA7 311 aa9.53□□□□□ -0.88
EXOSC9-211ENST00000512454 HS2ST1Q7LGA3 356 aa9.53□□□□□ -0.88
EXOSC9-211ENST00000512454 RNF180Q86T96 592 aa9.53□□□□□ -0.88
EXOSC9-211ENST00000512454 MAP4K3Q8IVH8 894 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms