RNA–Protein interactions for RNA: ENST00000511892.5

RNF4-217, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-217ENST00000511892 ATP2B1P20020 1258 aa6.5□□□□□ -1.37
RNF4-217ENST00000511892 PBX3P40426 434 aa6.5□□□□□ -1.37
RNF4-217ENST00000511892 RFC5P40937 340 aa6.5□□□□□ -1.37
RNF4-217ENST00000511892 TXKP42681 527 aa6.5□□□□□ -1.37
RNF4-217ENST00000511892 PHKA2P46019 1235 aa6.5□□□□□ -1.37
RNF4-217ENST00000511892 POLGP54098 1239 aaPredicted RBP6.5□□□□□ -1.37
RNF4-217ENST00000511892 ERVFC1P60507 584 aa6.5□□□□□ -1.37
RNF4-217ENST00000511892 LAMTOR4Q0VGL1 99 aa6.5□□□□□ -1.37
RNF4-217ENST00000511892 ADAM15Q13444 863 aa6.5□□□□□ -1.37
RNF4-217ENST00000511892 TRIM29Q14134 588 aa6.5□□□□□ -1.37
RNF4-217ENST00000511892 EMC2Q15006 297 aa6.5□□□□□ -1.37
RNF4-217ENST00000511892 XKR9Q5GH70 373 aa6.5□□□□□ -1.37
RNF4-217ENST00000511892 SPOUT1Q5T280 376 aaKnown RBP6.5□□□□□ -1.37
RNF4-217ENST00000511892 PTCRAQ6ISU1 281 aaPredicted RBP6.5□□□□□ -1.37
RNF4-217ENST00000511892 FAM178BQ8IXR5 827 aa6.5□□□□□ -1.37
RNF4-217ENST00000511892 RNF169Q8NCN4 708 aa6.5□□□□□ -1.37
RNF4-217ENST00000511892 FBXO18Q8NFZ0 1043 aa6.5□□□□□ -1.37
RNF4-217ENST00000511892 HELQQ8TDG4 1101 aa6.5□□□□□ -1.37
RNF4-217ENST00000511892 SLC7A3Q8WY07 619 aa6.5□□□□□ -1.37
RNF4-217ENST00000511892 C8orf76Q96K31 380 aa6.5□□□□□ -1.37
RNF4-217ENST00000511892 NLRP4Q96MN2 994 aa6.5□□□□□ -1.37
RNF4-217ENST00000511892 SCLT1Q96NL6 688 aa6.5□□□□□ -1.37
RNF4-217ENST00000511892 JPH2Q9BR39 696 aaPredicted RBP6.5□□□□□ -1.37
RNF4-217ENST00000511892 TRAIPQ9BWF2 469 aa6.5□□□□□ -1.37
RNF4-217ENST00000511892 PRKD2Q9BZL6 878 aa6.5□□□□□ -1.37
RNF4-217ENST00000511892 TMEM117Q9H0C3 514 aa6.5□□□□□ -1.37
RNF4-217ENST00000511892 IGFLR1Q9H665 355 aa6.5□□□□□ -1.37
RNF4-217ENST00000511892 ZSWIM4Q9H7M6 989 aa6.5□□□□□ -1.37
RNF4-217ENST00000511892 XPNPEP1Q9NQW7 623 aa6.5□□□□□ -1.37
RNF4-217ENST00000511892 CHST12Q9NRB3 414 aa6.5□□□□□ -1.37
RNF4-217ENST00000511892 SH2B1Q9NRF2 756 aaPredicted RBP6.5□□□□□ -1.37
RNF4-217ENST00000511892 DACT1Q9NYF0 836 aa6.5□□□□□ -1.37
RNF4-217ENST00000511892 PPME1Q9Y570 386 aa6.5□□□□□ -1.37
RNF4-217ENST00000511892 PCDHB12Q9Y5F1 795 aa6.5□□□□□ -1.37
RNF4-217ENST00000511892 COL4A3BPQ9Y5P4 624 aa6.5□□□□□ -1.37
RNF4-217ENST00000511892 CITO14578 2027 aa6.5□□□□□ -1.37
RNF4-217ENST00000511892 DOCK6Q96HP0 2047 aa6.5□□□□□ -1.37
RNF4-217ENST00000511892 PDCD11Q14690 1871 aaKnown RBP6.49□□□□□ -1.37
RNF4-217ENST00000511892 MYO15AQ9UKN7 3530 aa6.49□□□□□ -1.37
RNF4-217ENST00000511892 C3orf80F5H4A9 247 aa6.49□□□□□ -1.37
RNF4-217ENST00000511892 PER2O15055 1255 aa6.49□□□□□ -1.37
RNF4-217ENST00000511892 HOXA2O43364 376 aa6.49□□□□□ -1.37
RNF4-217ENST00000511892 ZNF623O75123 536 aa6.49□□□□□ -1.37
RNF4-217ENST00000511892 MED24O75448 989 aa6.49□□□□□ -1.37
RNF4-217ENST00000511892 OFD1O75665 1012 aa6.49□□□□□ -1.37
RNF4-217ENST00000511892 CD2BP2O95400 341 aaKnown RBP6.49□□□□□ -1.37
RNF4-217ENST00000511892 GLP2RO95838 553 aa6.49□□□□□ -1.37
RNF4-217ENST00000511892 LAG3P18627 525 aa6.49□□□□□ -1.37
RNF4-217ENST00000511892 PTMSP20962 102 aa6.49□□□□□ -1.37
RNF4-217ENST00000511892 SFPQP23246 707 aaKnown RBP eCLIP6.49□□□□□ -1.37
RNF4-217ENST00000511892 HOXA11P31270 313 aaPredicted RBP6.49□□□□□ -1.37
RNF4-217ENST00000511892 MCM7P33993 719 aa6.49□□□□□ -1.37
RNF4-217ENST00000511892 ARL2P36404 184 aa6.49□□□□□ -1.37
RNF4-217ENST00000511892 PLCB3Q01970 1234 aa6.49□□□□□ -1.37
RNF4-217ENST00000511892 UBE3AQ05086 875 aa6.49□□□□□ -1.37
RNF4-217ENST00000511892 CAMK2BQ13554 666 aa6.49□□□□□ -1.37
RNF4-217ENST00000511892 SAFBQ15424 915 aaKnown RBP eCLIP6.49□□□□□ -1.37
RNF4-217ENST00000511892 ZNF174Q15697 407 aa6.49□□□□□ -1.37
RNF4-217ENST00000511892 CLUL1Q15846 466 aa6.49□□□□□ -1.37
RNF4-217ENST00000511892 LONRF3Q496Y0 759 aa6.49□□□□□ -1.37
RNF4-217ENST00000511892 UBXN11Q5T124 520 aa6.49□□□□□ -1.37
RNF4-217ENST00000511892 TWF2Q6IBS0 349 aaKnown RBP6.49□□□□□ -1.37
RNF4-217ENST00000511892 KCNT2Q6UVM3 1135 aa6.49□□□□□ -1.37
RNF4-217ENST00000511892 EP400NLQ6ZTU2 488 aa6.49□□□□□ -1.37
RNF4-217ENST00000511892 OTUD6AQ7L8S5 288 aa6.49□□□□□ -1.37
RNF4-217ENST00000511892 CATSPER4Q7RTX7 472 aa6.49□□□□□ -1.37
RNF4-217ENST00000511892 SRGAP1Q7Z6B7 1085 aa6.49□□□□□ -1.37
RNF4-217ENST00000511892 RBM23Q86U06 439 aaKnown RBP6.49□□□□□ -1.37
RNF4-217ENST00000511892 FERMT3Q86UX7 667 aa6.49□□□□□ -1.37
RNF4-217ENST00000511892 CATSPER3Q86XQ3 398 aa6.49□□□□□ -1.37
RNF4-217ENST00000511892 THNSL1Q8IYQ7 743 aa6.49□□□□□ -1.37
RNF4-217ENST00000511892 EFHBQ8N7U6 833 aa6.49□□□□□ -1.37
RNF4-217ENST00000511892 C4orf32Q8N8J7 132 aa6.49□□□□□ -1.37
RNF4-217ENST00000511892 VN1R2Q8NFZ6 395 aa6.49□□□□□ -1.37
RNF4-217ENST00000511892 ASAP3Q8TDY4 903 aa6.49□□□□□ -1.37
RNF4-217ENST00000511892 PIGOQ8TEQ8 1089 aa6.49□□□□□ -1.37
RNF4-217ENST00000511892 TCP11Q8WWU5 503 aa6.49□□□□□ -1.37
RNF4-217ENST00000511892 PSPC1Q8WXF1 523 aaKnown RBP6.49□□□□□ -1.37
RNF4-217ENST00000511892 LPPQ93052 612 aa6.49□□□□□ -1.37
RNF4-217ENST00000511892 MSLNLQ96KJ4 702 aa6.49□□□□□ -1.37
RNF4-217ENST00000511892 ZSCAN31Q96LW9 406 aaPredicted RBP6.49□□□□□ -1.37
RNF4-217ENST00000511892 MTRQ99707 1265 aa6.49□□□□□ -1.37
RNF4-217ENST00000511892 INO80BQ9C086 356 aaPredicted RBP6.49□□□□□ -1.37
RNF4-217ENST00000511892 FOXP1Q9H334 677 aaPredicted RBP6.49□□□□□ -1.37
RNF4-217ENST00000511892 EPHX3Q9H6B9 360 aa6.49□□□□□ -1.37
RNF4-217ENST00000511892 TLR9Q9NR96 1032 aa6.49□□□□□ -1.37
RNF4-217ENST00000511892 AAASQ9NRG9 546 aa6.49□□□□□ -1.37
RNF4-217ENST00000511892 ANKEF1Q9NU02 776 aa6.49□□□□□ -1.37
RNF4-217ENST00000511892 AGPAT5Q9NUQ2 364 aa6.49□□□□□ -1.37
RNF4-217ENST00000511892 FAM105AQ9NUU6 356 aa6.49□□□□□ -1.37
RNF4-217ENST00000511892 CLEC1BQ9P126 229 aa6.49□□□□□ -1.37
RNF4-217ENST00000511892 PIN4Q9Y237 131 aaKnown RBP6.49□□□□□ -1.37
RNF4-217ENST00000511892 LZTS1Q9Y250 596 aa6.49□□□□□ -1.37
RNF4-217ENST00000511892 DENND4AQ7Z401 1863 aa6.49□□□□□ -1.37
RNF4-217ENST00000511892 VWA8A3KMH1 1905 aa6.48□□□□□ -1.37
RNF4-217ENST00000511892 MYH15Q9Y2K3 1946 aa6.48□□□□□ -1.37
RNF4-217ENST00000511892 TECTAO75443 2155 aa6.48□□□□□ -1.37
RNF4-217ENST00000511892 ASAP2O43150 1006 aa6.48□□□□□ -1.37
RNF4-217ENST00000511892 MBTPS2O43462 519 aa6.48□□□□□ -1.37
RNF4-217ENST00000511892 GAS2O43903 313 aaKnown RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms