RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 C2CD2LO14523 706 aa13.06□□□□□ -0.32
RNF4-216ENST00000511859 TEX28O15482 410 aa13.06□□□□□ -0.32
RNF4-216ENST00000511859 LILRB5O75023 590 aa13.06□□□□□ -0.32
RNF4-216ENST00000511859 LRRN2O75325 713 aa13.06□□□□□ -0.32
RNF4-216ENST00000511859 CSDE1O75534 798 aaKnown RBP13.06□□□□□ -0.32
RNF4-216ENST00000511859 RFPL2O75678 378 aa13.06□□□□□ -0.32
RNF4-216ENST00000511859 CYP3A4P08684 503 aa13.06□□□□□ -0.32
RNF4-216ENST00000511859 FAM86B2P0C5J1 330 aa13.06□□□□□ -0.32
RNF4-216ENST00000511859 TGM1P22735 817 aa13.06□□□□□ -0.32
RNF4-216ENST00000511859 LIFRP42702 1097 aa13.06□□□□□ -0.32
RNF4-216ENST00000511859 ADCY7P51828 1080 aa13.06□□□□□ -0.32
RNF4-216ENST00000511859 AK2P54819 239 aa13.06□□□□□ -0.32
RNF4-216ENST00000511859 PTH1RQ03431 593 aa13.06□□□□□ -0.32
RNF4-216ENST00000511859 LONRF3Q496Y0 759 aa13.06□□□□□ -0.32
RNF4-216ENST00000511859 TMTC3Q6ZXV5 915 aa13.06□□□□□ -0.32
RNF4-216ENST00000511859 FANCBQ8NB91 859 aa13.06□□□□□ -0.32
RNF4-216ENST00000511859 NELL1Q92832 810 aa13.06□□□□□ -0.32
RNF4-216ENST00000511859 PHKBQ93100 1093 aa13.06□□□□□ -0.32
RNF4-216ENST00000511859 NT5C3AQ9H0P0 336 aa13.06□□□□□ -0.32
RNF4-216ENST00000511859 ZDHHC7Q9NXF8 308 aa13.06□□□□□ -0.32
RNF4-216ENST00000511859 USP18Q9UMW8 372 aa13.06□□□□□ -0.32
RNF4-216ENST00000511859 SMG5Q9UPR3 1016 aaKnown RBP13.06□□□□□ -0.32
RNF4-216ENST00000511859 SAMM50Q9Y512 469 aa13.06□□□□□ -0.32
RNF4-216ENST00000511859 SLC12A7Q9Y666 1083 aa13.06□□□□□ -0.32
RNF4-216ENST00000511859 TAF6LQ9Y6J9 622 aa13.06□□□□□ -0.32
RNF4-216ENST00000511859 NUMBLQ9Y6R0 609 aa13.06□□□□□ -0.32
RNF4-216ENST00000511859 PATJQ8NI35 1801 aa13.05□□□□□ -0.32
RNF4-216ENST00000511859 F5P12259 2224 aa13.05□□□□□ -0.32
RNF4-216ENST00000511859 IGLV3-22A0A075B6J6 115 aa13.05□□□□□ -0.32
RNF4-216ENST00000511859 SMCO2A6NFE2 343 aa13.05□□□□□ -0.32
RNF4-216ENST00000511859 NRP1O14786 923 aa13.05□□□□□ -0.32
RNF4-216ENST00000511859 DDHD2O94830 711 aa13.05□□□□□ -0.32
RNF4-216ENST00000511859 RXRAP19793 462 aa13.05□□□□□ -0.32
RNF4-216ENST00000511859 MCM5P33992 734 aa13.05□□□□□ -0.32
RNF4-216ENST00000511859 CLK2P49760 499 aaKnown RBP13.05□□□□□ -0.32
RNF4-216ENST00000511859 GPC5P78333 572 aa13.05□□□□□ -0.32
RNF4-216ENST00000511859 SETQ01105 290 aaPredicted RBP13.05□□□□□ -0.32
RNF4-216ENST00000511859 NUCB1Q02818 461 aa13.05□□□□□ -0.32
RNF4-216ENST00000511859 SNW1Q13573 536 aaKnown RBP13.05□□□□□ -0.32
RNF4-216ENST00000511859 SLC44A4Q53GD3 710 aa13.05□□□□□ -0.32
RNF4-216ENST00000511859 WWC2Q6AWC2 1192 aa13.05□□□□□ -0.32
RNF4-216ENST00000511859 ZNF707Q96C28 371 aaPredicted RBP13.05□□□□□ -0.32
RNF4-216ENST00000511859 NELL2Q99435 816 aa13.05□□□□□ -0.32
RNF4-216ENST00000511859 FAM126AQ9BYI3 521 aaPredicted RBP13.05□□□□□ -0.32
RNF4-216ENST00000511859 RWDD1Q9H446 243 aaPredicted RBP13.05□□□□□ -0.32
RNF4-216ENST00000511859 RXFP1Q9HBX9 757 aa13.05□□□□□ -0.32
RNF4-216ENST00000511859 FAM170BA6NMN3 283 aa13.04□□□□□ -0.32
RNF4-216ENST00000511859 MEIS3P2A8K0S8 358 aa13.04□□□□□ -0.32
RNF4-216ENST00000511859 hCG_1984214I3L0E3 225 aa13.04□□□□□ -0.32
RNF4-216ENST00000511859 SH2B2O14492 632 aaPredicted RBP13.04□□□□□ -0.32
RNF4-216ENST00000511859 NCAM2O15394 837 aa13.04□□□□□ -0.32
RNF4-216ENST00000511859 PRC1O43663 620 aa13.04□□□□□ -0.32
RNF4-216ENST00000511859 GAS2O43903 313 aaKnown RBP13.04□□□□□ -0.32
RNF4-216ENST00000511859 OATP04181 439 aa13.04□□□□□ -0.32
RNF4-216ENST00000511859 DNM2P50570 870 aa13.04□□□□□ -0.32
RNF4-216ENST00000511859 MLF2Q15773 248 aaPredicted RBP13.04□□□□□ -0.32
RNF4-216ENST00000511859 ZBTB41Q5SVQ8 909 aa13.04□□□□□ -0.32
RNF4-216ENST00000511859 TYW1BQ6NUM6 668 aa13.04□□□□□ -0.32
RNF4-216ENST00000511859 GET4Q7L5D6 327 aaPredicted RBP13.04□□□□□ -0.32
RNF4-216ENST00000511859 ZNF410Q86VK4 478 aa13.04□□□□□ -0.32
RNF4-216ENST00000511859 ZNF713Q8N859 430 aaPredicted RBP13.04□□□□□ -0.32
RNF4-216ENST00000511859 HERC2P3Q9BVR0 1158 aa13.04□□□□□ -0.32
RNF4-216ENST00000511859 PRKD2Q9BZL6 878 aa13.04□□□□□ -0.32
RNF4-216ENST00000511859 GMEB2Q9UKD1 530 aa13.04□□□□□ -0.32
RNF4-216ENST00000511859 PIN4Q9Y237 131 aaKnown RBP13.04□□□□□ -0.32
RNF4-216ENST00000511859 ASPMQ8IZT6 3477 aa13.03□□□□□ -0.32
RNF4-216ENST00000511859 A0A087WZ62 844 aa13.03□□□□□ -0.32
RNF4-216ENST00000511859 WDR64B1ANS9 1081 aa13.03□□□□□ -0.32
RNF4-216ENST00000511859 GLUD2P49448 558 aa13.03□□□□□ -0.32
RNF4-216ENST00000511859 PFKPQ01813 784 aa13.03□□□□□ -0.32
RNF4-216ENST00000511859 AAMPQ13685 434 aa13.03□□□□□ -0.32
RNF4-216ENST00000511859 UBXN2BQ14CS0 331 aa13.03□□□□□ -0.32
RNF4-216ENST00000511859 PPM1JQ5JR12 505 aa13.03□□□□□ -0.32
RNF4-216ENST00000511859 MTSS1LQ765P7 747 aa13.03□□□□□ -0.32
RNF4-216ENST00000511859 MRPL10Q7Z7H8 261 aaKnown RBP13.03□□□□□ -0.32
RNF4-216ENST00000511859 GPR65Q8IYL9 337 aa13.03□□□□□ -0.32
RNF4-216ENST00000511859 EXOC6Q8TAG9 804 aa13.03□□□□□ -0.32
RNF4-216ENST00000511859 NETO1Q8TDF5 533 aa13.03□□□□□ -0.32
RNF4-216ENST00000511859 CRYGNQ8WXF5 182 aa13.03□□□□□ -0.32
RNF4-216ENST00000511859 FDXACB1Q9BRP7 624 aaPredicted RBP13.03□□□□□ -0.32
RNF4-216ENST00000511859 RPP25Q9BUL9 199 aaKnown RBP13.03□□□□□ -0.32
RNF4-216ENST00000511859 PCDHB2Q9Y5E7 798 aa13.03□□□□□ -0.32
RNF4-216ENST00000511859 CNTNAP2Q9UHC6 1331 aa13.03□□□□□ -0.32
RNF4-216ENST00000511859 FASNP49327 2511 aaKnown RBP13.02□□□□□ -0.32
RNF4-216ENST00000511859 SLC30A4O14863 429 aa13.02□□□□□ -0.33
RNF4-216ENST00000511859 ZNF862O60290 1169 aa13.02□□□□□ -0.33
RNF4-216ENST00000511859 B4GALT3O60512 393 aa13.02□□□□□ -0.33
RNF4-216ENST00000511859 EFEMP2O95967 443 aa13.02□□□□□ -0.33
RNF4-216ENST00000511859 SPATA31D3P0C874 917 aa13.02□□□□□ -0.33
RNF4-216ENST00000511859 RPS9P46781 194 aaKnown RBP13.02□□□□□ -0.33
RNF4-216ENST00000511859 DSG1Q02413 1049 aa13.02□□□□□ -0.33
RNF4-216ENST00000511859 TARBP2Q15633 366 aaKnown RBP13.02□□□□□ -0.33
RNF4-216ENST00000511859 AGMOQ6ZNB7 445 aa13.02□□□□□ -0.33
RNF4-216ENST00000511859 SPATA31D4Q6ZUB0 917 aa13.02□□□□□ -0.33
RNF4-216ENST00000511859 TAS1R1Q7RTX1 841 aa13.02□□□□□ -0.33
RNF4-216ENST00000511859 CATSPER4Q7RTX7 472 aa13.02□□□□□ -0.33
RNF4-216ENST00000511859 PALB2Q86YC2 1186 aa13.02□□□□□ -0.33
RNF4-216ENST00000511859 RNF168Q8IYW5 571 aaPredicted RBP13.02□□□□□ -0.33
RNF4-216ENST00000511859 FGF14Q92915 247 aa13.02□□□□□ -0.33
RNF4-216ENST00000511859 MAP4K1Q92918 833 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms