RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 EXOC3L4Q17RC7 722 aa16.59■□□□□ 0.25
SCLT1-209ENST00000511426 DCAF17Q5H9S7 520 aaPredicted RBP16.59■□□□□ 0.25
SCLT1-209ENST00000511426 TCERG1LQ5VWI1 586 aa16.59■□□□□ 0.25
SCLT1-209ENST00000511426 EFCAB12Q6NXP0 572 aa16.59■□□□□ 0.25
SCLT1-209ENST00000511426 CYP26C1Q6V0L0 522 aa16.59■□□□□ 0.25
SCLT1-209ENST00000511426 GBP6Q6ZN66 633 aa16.59■□□□□ 0.25
SCLT1-209ENST00000511426 TAS1R3Q7RTX0 852 aa16.59■□□□□ 0.25
SCLT1-209ENST00000511426 ZNF784Q8NCA9 323 aaPredicted RBP16.59■□□□□ 0.25
SCLT1-209ENST00000511426 TMC2Q8TDI7 906 aa16.59■□□□□ 0.25
SCLT1-209ENST00000511426 SYN2Q92777 582 aaPredicted RBP16.59■□□□□ 0.25
SCLT1-209ENST00000511426 BICD1Q96G01 975 aa16.59■□□□□ 0.25
SCLT1-209ENST00000511426 MMRN2Q9H8L6 949 aa16.59■□□□□ 0.25
SCLT1-209ENST00000511426 THSD7BQ9C0I4 1608 aa16.59■□□□□ 0.25
SCLT1-209ENST00000511426 AOC2O75106 756 aa16.59■□□□□ 0.25
SCLT1-209ENST00000511426 TUBB4AP04350 444 aa16.59■□□□□ 0.25
SCLT1-209ENST00000511426 CYBAP13498 195 aa16.59■□□□□ 0.25
SCLT1-209ENST00000511426 ADSSP30520 456 aa16.59■□□□□ 0.25
SCLT1-209ENST00000511426 GTF2H1P32780 548 aa16.59■□□□□ 0.25
SCLT1-209ENST00000511426 FLT3LGP49771 235 aa16.59■□□□□ 0.25
SCLT1-209ENST00000511426 PPFIA1Q13136 1202 aa16.59■□□□□ 0.25
SCLT1-209ENST00000511426 MKRN4PQ13434 485 aaPredicted RBP16.59■□□□□ 0.25
SCLT1-209ENST00000511426 MAPK6Q16659 721 aa16.59■□□□□ 0.25
SCLT1-209ENST00000511426 PTPN21Q16825 1174 aa16.59■□□□□ 0.25
SCLT1-209ENST00000511426 GPD1LQ8N335 351 aa16.59■□□□□ 0.25
SCLT1-209ENST00000511426 POMGNT1Q8WZA1 660 aa16.59■□□□□ 0.25
SCLT1-209ENST00000511426 MRPL4Q9BYD3 311 aaKnown RBP16.59■□□□□ 0.25
SCLT1-209ENST00000511426 CCDC113Q9H0I3 377 aa16.59■□□□□ 0.25
SCLT1-209ENST00000511426 SUGCTQ9HAC7 445 aa16.59■□□□□ 0.25
SCLT1-209ENST00000511426 PLAGL2Q9UPG8 496 aa16.59■□□□□ 0.25
SCLT1-209ENST00000511426 ADCY6O43306 1168 aa16.58■□□□□ 0.24
SCLT1-209ENST00000511426 ZSCAN12O43309 604 aa16.58■□□□□ 0.24
SCLT1-209ENST00000511426 EXTL3O43909 919 aa16.58■□□□□ 0.24
SCLT1-209ENST00000511426 ZNF286BP0CG31 522 aa16.58■□□□□ 0.24
SCLT1-209ENST00000511426 YY1P25490 414 aa16.58■□□□□ 0.24
SCLT1-209ENST00000511426 KLRC1P26715 233 aa16.58■□□□□ 0.24
SCLT1-209ENST00000511426 VAMP7P51809 220 aa16.58■□□□□ 0.24
SCLT1-209ENST00000511426 KCNMA1Q12791 1236 aa16.58■□□□□ 0.24
SCLT1-209ENST00000511426 GRIK4Q16099 956 aa16.58■□□□□ 0.24
SCLT1-209ENST00000511426 SNRNP35Q16560 246 aaKnown RBP16.58■□□□□ 0.24
SCLT1-209ENST00000511426 RNF149Q8NC42 400 aa16.58■□□□□ 0.24
SCLT1-209ENST00000511426 CPLX3Q8WVH0 158 aa16.58■□□□□ 0.24
SCLT1-209ENST00000511426 VTI1AQ96AJ9 217 aa16.58■□□□□ 0.24
SCLT1-209ENST00000511426 MAP7D2Q96T17 732 aa16.58■□□□□ 0.24
SCLT1-209ENST00000511426 SPC25Q9HBM1 224 aa16.58■□□□□ 0.24
SCLT1-209ENST00000511426 HAS3O00219 553 aa16.57■□□□□ 0.24
SCLT1-209ENST00000511426 PHKA2P46019 1235 aa16.57■□□□□ 0.24
SCLT1-209ENST00000511426 FMO5P49326 533 aa16.57■□□□□ 0.24
SCLT1-209ENST00000511426 PTENP60484 403 aa16.57■□□□□ 0.24
SCLT1-209ENST00000511426 PCBP1Q15365 356 aaKnown RBP eCLIP16.57■□□□□ 0.24
SCLT1-209ENST00000511426 FAM187BQ17R55 369 aa16.57■□□□□ 0.24
SCLT1-209ENST00000511426 SLC39A4Q6P5W5 647 aa16.57■□□□□ 0.24
SCLT1-209ENST00000511426 MTHFD1LQ6UB35 978 aa16.57■□□□□ 0.24
SCLT1-209ENST00000511426 CACNA2D4Q7Z3S7 1137 aa16.57■□□□□ 0.24
SCLT1-209ENST00000511426 ZNF410Q86VK4 478 aa16.57■□□□□ 0.24
SCLT1-209ENST00000511426 PRIMPOLQ96LW4 560 aa16.57■□□□□ 0.24
SCLT1-209ENST00000511426 MFSD14AQ96MC6 490 aa16.57■□□□□ 0.24
SCLT1-209ENST00000511426 RRAGDQ9NQL2 400 aaPredicted RBP16.57■□□□□ 0.24
SCLT1-209ENST00000511426 SAGE1Q9NXZ1 904 aa16.57■□□□□ 0.24
SCLT1-209ENST00000511426 ZNF233A6NK53 670 aa16.56■□□□□ 0.24
SCLT1-209ENST00000511426 ANKRD63C9JTQ0 380 aa16.56■□□□□ 0.24
SCLT1-209ENST00000511426 KIF2AO00139 706 aaPredicted RBP16.56■□□□□ 0.24
SCLT1-209ENST00000511426 SEPT4O43236 478 aa16.56■□□□□ 0.24
SCLT1-209ENST00000511426 ZEB2O60315 1214 aa16.56■□□□□ 0.24
SCLT1-209ENST00000511426 MSCO60682 206 aa16.56■□□□□ 0.24
SCLT1-209ENST00000511426 TOM1L1O75674 476 aa16.56■□□□□ 0.24
SCLT1-209ENST00000511426 PRMT2P55345 433 aa16.56■□□□□ 0.24
SCLT1-209ENST00000511426 GJA9P57773 515 aa16.56■□□□□ 0.24
SCLT1-209ENST00000511426 DRP2Q13474 957 aa16.56■□□□□ 0.24
SCLT1-209ENST00000511426 PRAMEF19Q5SWL8 479 aa16.56■□□□□ 0.24
SCLT1-209ENST00000511426 RHPN2Q8IUC4 686 aa16.56■□□□□ 0.24
SCLT1-209ENST00000511426 CCDC170Q8IYT3 715 aa16.56■□□□□ 0.24
SCLT1-209ENST00000511426 LRRC71Q8N4P6 559 aa16.56■□□□□ 0.24
SCLT1-209ENST00000511426 METTL13Q8N6R0 699 aa16.56■□□□□ 0.24
SCLT1-209ENST00000511426 TRIB2Q92519 343 aa16.56■□□□□ 0.24
SCLT1-209ENST00000511426 UPF3AQ9H1J1 476 aaKnown RBP16.56■□□□□ 0.24
SCLT1-209ENST00000511426 IKZF4Q9H2S9 585 aa16.56■□□□□ 0.24
SCLT1-209ENST00000511426 FZD8Q9H461 694 aa16.56■□□□□ 0.24
SCLT1-209ENST00000511426 FAM207AQ9NSI2 230 aaPredicted RBP16.56■□□□□ 0.24
SCLT1-209ENST00000511426 PRMT7Q9NVM4 692 aaPredicted RBP16.56■□□□□ 0.24
SCLT1-209ENST00000511426 ACKR2O00590 384 aa16.56■□□□□ 0.24
SCLT1-209ENST00000511426 PRKCBP05771 671 aa16.56■□□□□ 0.24
SCLT1-209ENST00000511426 GNAT1P11488 350 aa16.56■□□□□ 0.24
SCLT1-209ENST00000511426 POU5F1Q01860 360 aaKnown RBP16.56■□□□□ 0.24
SCLT1-209ENST00000511426 PRKCZQ05513 592 aa16.56■□□□□ 0.24
SCLT1-209ENST00000511426 FSCN1Q16658 493 aaKnown RBP16.56■□□□□ 0.24
SCLT1-209ENST00000511426 SMYD5Q6GMV2 418 aa16.56■□□□□ 0.24
SCLT1-209ENST00000511426 CCAR2Q8N163 923 aaKnown RBP16.56■□□□□ 0.24
SCLT1-209ENST00000511426 LSM14BQ9BX40 385 aaKnown RBP16.56■□□□□ 0.24
SCLT1-209ENST00000511426 PCIF1Q9H4Z3 704 aa16.56■□□□□ 0.24
SCLT1-209ENST00000511426 RNF186Q9NXI6 227 aa16.56■□□□□ 0.24
SCLT1-209ENST00000511426 USP20Q9Y2K6 914 aa16.56■□□□□ 0.24
SCLT1-209ENST00000511426 A0A0B4J269 797 aa16.55■□□□□ 0.24
SCLT1-209ENST00000511426 SMIM35A0A1B0GVV1 85 aa16.55■□□□□ 0.24
SCLT1-209ENST00000511426 MBLAC1A4D2B0 266 aaPredicted RBP16.55■□□□□ 0.24
SCLT1-209ENST00000511426 RPLP2P05387 115 aaKnown RBP16.55■□□□□ 0.24
SCLT1-209ENST00000511426 PON1P27169 355 aa16.55■□□□□ 0.24
SCLT1-209ENST00000511426 MYL7Q01449 175 aa16.55■□□□□ 0.24
SCLT1-209ENST00000511426 E4F1Q66K89 784 aaPredicted RBP16.55■□□□□ 0.24
SCLT1-209ENST00000511426 PXYLP1Q8TE99 480 aa16.55■□□□□ 0.24
SCLT1-209ENST00000511426 BAP1Q92560 729 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms