RNA–Protein interactions for RNA: ENST00000511241.5

LINC01088-207, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 2

Gene LINC01088, Length 679 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-207ENST00000511241 DDX21Q9NR30 783 aaKnown RBP eCLIP9.43□□□□□ -0.9
LINC01088-207ENST00000511241 COL4A3BPQ9Y5P4 624 aa9.43□□□□□ -0.9
LINC01088-207ENST00000511241 DICER1Q9UPY3 1922 aaKnown RBP9.43□□□□□ -0.9
LINC01088-207ENST00000511241 TCRBV5S2A0A599 114 aa9.42□□□□□ -0.9
LINC01088-207ENST00000511241 FZD9O00144 591 aa9.42□□□□□ -0.9
LINC01088-207ENST00000511241 ELL2O00472 640 aaPredicted RBP9.42□□□□□ -0.9
LINC01088-207ENST00000511241 SLC27A2O14975 620 aa9.42□□□□□ -0.9
LINC01088-207ENST00000511241 ANP32CO43423 234 aa9.42□□□□□ -0.9
LINC01088-207ENST00000511241 PARP10Q53GL7 1025 aa9.42□□□□□ -0.9
LINC01088-207ENST00000511241 SLC10A5Q5PT55 438 aa9.42□□□□□ -0.9
LINC01088-207ENST00000511241 PPP1R42Q7Z4L9 355 aa9.42□□□□□ -0.9
LINC01088-207ENST00000511241 ZNF605Q86T29 641 aa9.42□□□□□ -0.9
LINC01088-207ENST00000511241 PTRH1Q86Y79 214 aaKnown RBP9.42□□□□□ -0.9
LINC01088-207ENST00000511241 RBM17Q96I25 401 aaKnown RBP9.42□□□□□ -0.9
LINC01088-207ENST00000511241 CRAMP1Q96RY5 1269 aa9.42□□□□□ -0.9
LINC01088-207ENST00000511241 PSMD1Q99460 953 aa9.42□□□□□ -0.9
LINC01088-207ENST00000511241 BOCQ9BWV1 1114 aa9.42□□□□□ -0.9
LINC01088-207ENST00000511241 EPB41L4BQ9H329 900 aa9.42□□□□□ -0.9
LINC01088-207ENST00000511241 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.42□□□□□ -0.9
LINC01088-207ENST00000511241 BABAM1Q9NWV8 329 aa9.42□□□□□ -0.9
LINC01088-207ENST00000511241 COL4A1P02462 1669 aa9.42□□□□□ -0.9
LINC01088-207ENST00000511241 PTPDC1A2A3K4 754 aa9.41□□□□□ -0.9
LINC01088-207ENST00000511241 MAN2B1O00754 1011 aa9.41□□□□□ -0.9
LINC01088-207ENST00000511241 GAS7O60861 476 aa9.41□□□□□ -0.9
LINC01088-207ENST00000511241 CLASP2O75122 1294 aaKnown RBP9.41□□□□□ -0.9
LINC01088-207ENST00000511241 VIPR1P32241 457 aa9.41□□□□□ -0.9
LINC01088-207ENST00000511241 EPHX2P34913 555 aa9.41□□□□□ -0.9
LINC01088-207ENST00000511241 TCIRG1Q13488 830 aa9.41□□□□□ -0.9
LINC01088-207ENST00000511241 SART3Q15020 963 aaKnown RBP9.41□□□□□ -0.9
LINC01088-207ENST00000511241 SEPT7Q16181 437 aaKnown RBP9.41□□□□□ -0.9
LINC01088-207ENST00000511241 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.41□□□□□ -0.9
LINC01088-207ENST00000511241 LDHDQ86WU2 507 aa9.41□□□□□ -0.9
LINC01088-207ENST00000511241 UBR7Q8N806 425 aa9.41□□□□□ -0.9
LINC01088-207ENST00000511241 TTLL11Q8NHH1 800 aa9.41□□□□□ -0.9
LINC01088-207ENST00000511241 PCDH12Q9NPG4 1184 aa9.41□□□□□ -0.9
LINC01088-207ENST00000511241 DCP1AQ9NPI6 582 aaPredicted RBP9.41□□□□□ -0.9
LINC01088-207ENST00000511241 TRMT112Q9UI30 125 aaKnown RBP9.41□□□□□ -0.9
LINC01088-207ENST00000511241 HACL1Q9UJ83 578 aa9.41□□□□□ -0.9
LINC01088-207ENST00000511241 ATP23Q9Y6H3 246 aa9.41□□□□□ -0.9
LINC01088-207ENST00000511241 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.41□□□□□ -0.9
LINC01088-207ENST00000511241 LTBP1Q14766 1721 aa9.4□□□□□ -0.9
LINC01088-207ENST00000511241 PASKQ96RG2 1323 aa9.4□□□□□ -0.9
LINC01088-207ENST00000511241 ZNF853P0CG23 659 aa9.4□□□□□ -0.9
LINC01088-207ENST00000511241 HSPA1AP0DMV8 641 aaKnown RBP9.4□□□□□ -0.9
LINC01088-207ENST00000511241 HSPA1BP0DMV9 641 aaKnown RBP9.4□□□□□ -0.9
LINC01088-207ENST00000511241 GJA4P35212 333 aa9.4□□□□□ -0.9
LINC01088-207ENST00000511241 EPS15P42566 896 aa9.4□□□□□ -0.9
LINC01088-207ENST00000511241 NFKB2Q00653 900 aa9.4□□□□□ -0.9
LINC01088-207ENST00000511241 DSG1Q02413 1049 aa9.4□□□□□ -0.9
LINC01088-207ENST00000511241 TUSC3Q13454 348 aa9.4□□□□□ -0.9
LINC01088-207ENST00000511241 PRR23BQ6ZRT6 265 aa9.4□□□□□ -0.9
LINC01088-207ENST00000511241 TMC6Q7Z403 805 aa9.4□□□□□ -0.9
LINC01088-207ENST00000511241 AFAP1L2Q8N4X5 818 aa9.4□□□□□ -0.9
LINC01088-207ENST00000511241 C8orf58Q8NAV2 365 aa9.4□□□□□ -0.9
LINC01088-207ENST00000511241 FAM89AQ96GI7 184 aa9.4□□□□□ -0.9
LINC01088-207ENST00000511241 ISCA1Q9BUE6 129 aa9.4□□□□□ -0.9
LINC01088-207ENST00000511241 NSUN3Q9H649 340 aaKnown RBP9.4□□□□□ -0.9
LINC01088-207ENST00000511241 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.4□□□□□ -0.9
LINC01088-207ENST00000511241 NOP58Q9Y2X3 529 aaKnown RBP9.4□□□□□ -0.9
LINC01088-207ENST00000511241 ATP6V0A2Q9Y487 856 aa9.4□□□□□ -0.9
LINC01088-207ENST00000511241 HCFC2Q9Y5Z7 792 aa9.4□□□□□ -0.9
LINC01088-207ENST00000511241 PPIP5K2O43314 1243 aa9.39□□□□□ -0.91
LINC01088-207ENST00000511241 SRSF3P84103 164 aaKnown RBP9.39□□□□□ -0.91
LINC01088-207ENST00000511241 AMPD3Q01432 767 aa9.39□□□□□ -0.91
LINC01088-207ENST00000511241 MIB1Q86YT6 1006 aa9.39□□□□□ -0.91
LINC01088-207ENST00000511241 GPC2Q8N158 579 aa9.39□□□□□ -0.91
LINC01088-207ENST00000511241 JDP2Q8WYK2 163 aa9.39□□□□□ -0.91
LINC01088-207ENST00000511241 ALG3Q92685 438 aa9.39□□□□□ -0.91
LINC01088-207ENST00000511241 USP7Q93009 1102 aa9.39□□□□□ -0.91
LINC01088-207ENST00000511241 GPR101Q96P66 508 aaPredicted RBP9.39□□□□□ -0.91
LINC01088-207ENST00000511241 CD244Q9BZW8 370 aa9.39□□□□□ -0.91
LINC01088-207ENST00000511241 NGRNQ9NPE2 291 aaKnown RBP9.39□□□□□ -0.91
LINC01088-207ENST00000511241 SIRT5Q9NXA8 310 aa9.39□□□□□ -0.91
LINC01088-207ENST00000511241 SH3TC1Q8TE82 1336 aa9.38□□□□□ -0.91
LINC01088-207ENST00000511241 SHTN1A0MZ66 631 aa9.38□□□□□ -0.91
LINC01088-207ENST00000511241 LRRC10BA6NIK2 292 aa9.38□□□□□ -0.91
LINC01088-207ENST00000511241 ZEB2O60315 1214 aa9.38□□□□□ -0.91
LINC01088-207ENST00000511241 HIP1RO75146 1068 aa9.38□□□□□ -0.91
LINC01088-207ENST00000511241 RAD17O75943 681 aa9.38□□□□□ -0.91
LINC01088-207ENST00000511241 ZBTB48P10074 688 aaPredicted RBP9.38□□□□□ -0.91
LINC01088-207ENST00000511241 OCRLQ01968 901 aa9.38□□□□□ -0.91
LINC01088-207ENST00000511241 MLANAQ16655 118 aa9.38□□□□□ -0.91
LINC01088-207ENST00000511241 HSP90AB3PQ58FF7 597 aa9.38□□□□□ -0.91
LINC01088-207ENST00000511241 NOSTRINQ8IVI9 506 aa9.38□□□□□ -0.91
LINC01088-207ENST00000511241 FAM126BQ8IXS8 530 aa9.38□□□□□ -0.91
LINC01088-207ENST00000511241 CNTROBQ8N137 903 aa9.38□□□□□ -0.91
LINC01088-207ENST00000511241 NXPE1Q8N323 547 aa9.38□□□□□ -0.91
LINC01088-207ENST00000511241 TSPYL6Q8N831 410 aa9.38□□□□□ -0.91
LINC01088-207ENST00000511241 ARRDC4Q8NCT1 418 aa9.38□□□□□ -0.91
LINC01088-207ENST00000511241 PLBD2Q8NHP8 589 aa9.38□□□□□ -0.91
LINC01088-207ENST00000511241 CLEC4DQ8WXI8 215 aa9.38□□□□□ -0.91
LINC01088-207ENST00000511241 CELF1Q92879 486 aaKnown RBP9.38□□□□□ -0.91
LINC01088-207ENST00000511241 GPATCH3Q96I76 525 aa9.38□□□□□ -0.91
LINC01088-207ENST00000511241 DIRC2Q96SL1 478 aa9.38□□□□□ -0.91
LINC01088-207ENST00000511241 MCM8Q9UJA3 840 aa9.38□□□□□ -0.91
LINC01088-207ENST00000511241 ZNF891A8MT65 544 aaPredicted RBP9.37□□□□□ -0.91
LINC01088-207ENST00000511241 H7C1D1 291 aa9.37□□□□□ -0.91
LINC01088-207ENST00000511241 BRINP1O60477 761 aa9.37□□□□□ -0.91
LINC01088-207ENST00000511241 IRF9Q00978 393 aa9.37□□□□□ -0.91
LINC01088-207ENST00000511241 CXCL9Q07325 125 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms