RNA–Protein interactions for RNA: ENST00000510217.1

PFDN1-203, Transcript of prefoldin subunit 1, humanhuman

TSL 2 BASIC

Gene PFDN1, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-203ENST00000510217 SLC39A11Q8N1S5 342 aa11.44□□□□□ -0.58
PFDN1-203ENST00000510217 C4orf32Q8N8J7 132 aa11.44□□□□□ -0.58
PFDN1-203ENST00000510217 RSPH1Q8WYR4 309 aa11.44□□□□□ -0.58
PFDN1-203ENST00000510217 KHSRPQ92945 711 aaKnown RBP eCLIP11.44□□□□□ -0.584e-6■■■■□ 20.7
PFDN1-203ENST00000510217 PPP2R3CQ969Q6 453 aa11.44□□□□□ -0.58
PFDN1-203ENST00000510217 MSLNLQ96KJ4 702 aa11.44□□□□□ -0.58
PFDN1-203ENST00000510217 CCDC43Q96MW1 224 aaKnown RBP11.44□□□□□ -0.58
PFDN1-203ENST00000510217 POLR3CQ9BUI4 534 aaPredicted RBP11.44□□□□□ -0.58
PFDN1-203ENST00000510217 POLR3FQ9H1D9 316 aaPredicted RBP11.44□□□□□ -0.58
PFDN1-203ENST00000510217 NOL7Q9UMY1 257 aaKnown RBP11.44□□□□□ -0.58
PFDN1-203ENST00000510217 PCDHB2Q9Y5E7 798 aa11.44□□□□□ -0.58
PFDN1-203ENST00000510217 MBTPS2O43462 519 aa11.43□□□□□ -0.58
PFDN1-203ENST00000510217 B4GALT3O60512 393 aa11.43□□□□□ -0.58
PFDN1-203ENST00000510217 ZC3H11AO75152 810 aaKnown RBP eCLIP11.43□□□□□ -0.58
PFDN1-203ENST00000510217 OFD1O75665 1012 aa11.43□□□□□ -0.58
PFDN1-203ENST00000510217 ERLIN2O94905 339 aa11.43□□□□□ -0.58
PFDN1-203ENST00000510217 XRCC6P12956 609 aaKnown RBP eCLIP11.43□□□□□ -0.58
PFDN1-203ENST00000510217 RPA1P27694 616 aa11.43□□□□□ -0.58
PFDN1-203ENST00000510217 NDUFV1P49821 464 aa11.43□□□□□ -0.58
PFDN1-203ENST00000510217 FXR2P51116 673 aaKnown RBP eCLIP11.43□□□□□ -0.58
PFDN1-203ENST00000510217 BCAR1P56945 870 aa11.43□□□□□ -0.58
PFDN1-203ENST00000510217 POU5F1BQ06416 359 aa11.43□□□□□ -0.58
PFDN1-203ENST00000510217 SMAD4Q13485 552 aaKnown RBP11.43□□□□□ -0.58
PFDN1-203ENST00000510217 PCBP1Q15365 356 aaKnown RBP eCLIP11.43□□□□□ -0.586e-7■■■□□ 15.8
PFDN1-203ENST00000510217 AMHR2Q16671 573 aa11.43□□□□□ -0.58
PFDN1-203ENST00000510217 DUSP6Q16828 381 aa11.43□□□□□ -0.58
PFDN1-203ENST00000510217 GLB1LQ6UWU2 654 aa11.43□□□□□ -0.58
PFDN1-203ENST00000510217 AGMOQ6ZNB7 445 aa11.43□□□□□ -0.58
PFDN1-203ENST00000510217 RBM23Q86U06 439 aaKnown RBP11.43□□□□□ -0.58
PFDN1-203ENST00000510217 TMEM173Q86WV6 379 aaPredicted RBP11.43□□□□□ -0.58
PFDN1-203ENST00000510217 VN1R2Q8NFZ6 395 aa11.43□□□□□ -0.58
PFDN1-203ENST00000510217 ERMNQ8TAM6 284 aa11.43□□□□□ -0.58
PFDN1-203ENST00000510217 TCF25Q9BQ70 676 aa11.43□□□□□ -0.58
PFDN1-203ENST00000510217 NFKBIZQ9BYH8 718 aa11.43□□□□□ -0.58
PFDN1-203ENST00000510217 GPRC5CQ9NQ84 441 aa11.43□□□□□ -0.58
PFDN1-203ENST00000510217 ENTPD7Q9NQZ7 604 aa11.43□□□□□ -0.58
PFDN1-203ENST00000510217 TBC1D13Q9NVG8 400 aa11.43□□□□□ -0.58
PFDN1-203ENST00000510217 SPG21Q9NZD8 308 aa11.43□□□□□ -0.58
PFDN1-203ENST00000510217 CLEC1BQ9P126 229 aa11.43□□□□□ -0.58
PFDN1-203ENST00000510217 DBR1Q9UK59 544 aaKnown RBP11.43□□□□□ -0.58
PFDN1-203ENST00000510217 BARX2Q9UMQ3 279 aaPredicted RBP11.43□□□□□ -0.58
PFDN1-203ENST00000510217 INPP5FQ9Y2H2 1132 aa11.43□□□□□ -0.58
PFDN1-203ENST00000510217 PCDHB6Q9Y5E3 794 aa11.43□□□□□ -0.58
PFDN1-203ENST00000510217 GOLGA6L3A6NEY3 463 aa11.42□□□□□ -0.58
PFDN1-203ENST00000510217 NT5C1B-RDH14C9J2C7 533 aa11.42□□□□□ -0.58
PFDN1-203ENST00000510217 INO80B-WBP1J3KQ70 363 aa11.42□□□□□ -0.58
PFDN1-203ENST00000510217 PER2O15055 1255 aa11.42□□□□□ -0.58
PFDN1-203ENST00000510217 NCLP19338 710 aaKnown RBP11.42□□□□□ -0.58
PFDN1-203ENST00000510217 AXLP30530 894 aa11.42□□□□□ -0.58
PFDN1-203ENST00000510217 AFF1P51825 1210 aaKnown RBP11.42□□□□□ -0.58
PFDN1-203ENST00000510217 RBM10P98175 930 aaKnown RBP11.42□□□□□ -0.58
PFDN1-203ENST00000510217 ZP2Q05996 745 aa11.42□□□□□ -0.58
PFDN1-203ENST00000510217 TFDP1Q14186 410 aa11.42□□□□□ -0.58
PFDN1-203ENST00000510217 SMAD2Q15796 467 aaKnown RBP11.42□□□□□ -0.58
PFDN1-203ENST00000510217 ECM1Q16610 540 aa11.42□□□□□ -0.58
PFDN1-203ENST00000510217 NOMO2Q5JPE7 1267 aa11.42□□□□□ -0.58
PFDN1-203ENST00000510217 HAUS3Q68CZ6 603 aa11.42□□□□□ -0.58
PFDN1-203ENST00000510217 CDCA2Q69YH5 1023 aaPredicted RBP11.42□□□□□ -0.58
PFDN1-203ENST00000510217 PDE12Q6L8Q7 609 aaKnown RBP11.42□□□□□ -0.58
PFDN1-203ENST00000510217 NOTUMQ6P988 496 aa11.42□□□□□ -0.58
PFDN1-203ENST00000510217 MRPL10Q7Z7H8 261 aaKnown RBP11.42□□□□□ -0.58
PFDN1-203ENST00000510217 IGSF22Q8N9C0 903 aa11.42□□□□□ -0.58
PFDN1-203ENST00000510217 SMRP1Q8NCR6 262 aa11.42□□□□□ -0.58
PFDN1-203ENST00000510217 SMG8Q8ND04 991 aaKnown RBP11.42□□□□□ -0.58
PFDN1-203ENST00000510217 MCPH1Q8NEM0 835 aa11.42□□□□□ -0.58
PFDN1-203ENST00000510217 MICAL1Q8TDZ2 1067 aa11.42□□□□□ -0.58
PFDN1-203ENST00000510217 BCL7CQ8WUZ0 217 aaPredicted RBP11.42□□□□□ -0.58
PFDN1-203ENST00000510217 CPB2Q96IY4 423 aa11.42□□□□□ -0.58
PFDN1-203ENST00000510217 CDCA3Q99618 268 aaPredicted RBP11.42□□□□□ -0.58
PFDN1-203ENST00000510217 EIF2AQ9BY44 585 aaKnown RBP11.42□□□□□ -0.58
PFDN1-203ENST00000510217 NRDE2Q9H7Z3 1164 aa11.42□□□□□ -0.58
PFDN1-203ENST00000510217 TLE6Q9H808 572 aa11.42□□□□□ -0.58
PFDN1-203ENST00000510217 RSAD1Q9HA92 442 aa11.42□□□□□ -0.58
PFDN1-203ENST00000510217 CD207Q9UJ71 328 aa11.42□□□□□ -0.58
PFDN1-203ENST00000510217 TDRD15B5MCY1 1934 aaKnown RBP11.42□□□□□ -0.58
PFDN1-203ENST00000510217 C5orf42Q9H799 3197 aa11.41□□□□□ -0.58
PFDN1-203ENST00000510217 CNTNAP2Q9UHC6 1331 aa11.41□□□□□ -0.58
PFDN1-203ENST00000510217 HIDE1A8MVS5 230 aa11.41□□□□□ -0.58
PFDN1-203ENST00000510217 B4GALT5O43286 388 aa11.41□□□□□ -0.58
PFDN1-203ENST00000510217 EYA4O95677 639 aa11.41□□□□□ -0.58
PFDN1-203ENST00000510217 ARF4P18085 180 aaPredicted RBP11.41□□□□□ -0.58
PFDN1-203ENST00000510217 MUTP22033 750 aa11.41□□□□□ -0.58
PFDN1-203ENST00000510217 GJB2P29033 226 aa11.41□□□□□ -0.58
PFDN1-203ENST00000510217 COASYQ13057 564 aa11.41□□□□□ -0.58
PFDN1-203ENST00000510217 PTGDRQ13258 359 aa11.41□□□□□ -0.58
PFDN1-203ENST00000510217 KCNC3Q14003 757 aa11.41□□□□□ -0.58
PFDN1-203ENST00000510217 MAEAQ7L5Y9 396 aa11.41□□□□□ -0.58
PFDN1-203ENST00000510217 ZNF280BQ86YH2 543 aa11.41□□□□□ -0.58
PFDN1-203ENST00000510217 ADHFE1Q8IWW8 467 aa11.41□□□□□ -0.58
PFDN1-203ENST00000510217 GJD3Q8N144 294 aa11.41□□□□□ -0.58
PFDN1-203ENST00000510217 BSNDQ8WZ55 320 aa11.41□□□□□ -0.58
PFDN1-203ENST00000510217 PGBD4Q96DM1 585 aa11.41□□□□□ -0.58
PFDN1-203ENST00000510217 CCDC51Q96ER9 411 aa11.41□□□□□ -0.58
PFDN1-203ENST00000510217 NACC1Q96RE7 527 aa11.41□□□□□ -0.58
PFDN1-203ENST00000510217 CSRNP2Q9H175 543 aa11.41□□□□□ -0.58
PFDN1-203ENST00000510217 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.41□□□□□ -0.58
PFDN1-203ENST00000510217 DNAJB4Q9UDY4 337 aa11.41□□□□□ -0.58
PFDN1-203ENST00000510217 PRKAG3Q9UGI9 489 aa11.41□□□□□ -0.58
PFDN1-203ENST00000510217 PUF60Q9UHX1 559 aaKnown RBP11.41□□□□□ -0.58
PFDN1-203ENST00000510217 FAM50BQ9Y247 325 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms