RNA–Protein interactions for RNA: ENST00000509994.2

SCARB2-204, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-204ENST00000509994 MCM7P33993 719 aa11.29□□□□□ -0.6
SCARB2-204ENST00000509994 MXD4Q14582 209 aaPredicted RBP11.29□□□□□ -0.6
SCARB2-204ENST00000509994 HERC4Q5GLZ8 1057 aaPredicted RBP11.29□□□□□ -0.6
SCARB2-204ENST00000509994 RARS2Q5T160 578 aaKnown RBP11.29□□□□□ -0.6
SCARB2-204ENST00000509994 HFE2Q6ZVN8 426 aa11.29□□□□□ -0.6
SCARB2-204ENST00000509994 FERMT3Q86UX7 667 aa11.29□□□□□ -0.6
SCARB2-204ENST00000509994 SUGP1Q8IWZ8 645 aaKnown RBP11.29□□□□□ -0.6
SCARB2-204ENST00000509994 MRPL43Q8N983 215 aaKnown RBP11.29□□□□□ -0.6
SCARB2-204ENST00000509994 NSUN7Q8NE18 718 aaKnown RBP11.29□□□□□ -0.6
SCARB2-204ENST00000509994 CPB2Q96IY4 423 aa11.29□□□□□ -0.6
SCARB2-204ENST00000509994 MFSD14AQ96MC6 490 aa11.29□□□□□ -0.6
SCARB2-204ENST00000509994 DHX33Q9H6R0 707 aaKnown RBP11.29□□□□□ -0.6
SCARB2-204ENST00000509994 NRDE2Q9H7Z3 1164 aa11.29□□□□□ -0.6
SCARB2-204ENST00000509994 RSAD1Q9HA92 442 aa11.29□□□□□ -0.6
SCARB2-204ENST00000509994 IFT122Q9HBG6 1241 aa11.29□□□□□ -0.6
SCARB2-204ENST00000509994 DNAJB4Q9UDY4 337 aa11.29□□□□□ -0.6
SCARB2-204ENST00000509994 NR2E1Q9Y466 385 aa11.29□□□□□ -0.6
SCARB2-204ENST00000509994 CNTNAP2Q9UHC6 1331 aa11.29□□□□□ -0.6
SCARB2-204ENST00000509994 LOC730098B7Z3J9 87 aa11.28□□□□□ -0.6
SCARB2-204ENST00000509994 C2CD2LO14523 706 aa11.28□□□□□ -0.6
SCARB2-204ENST00000509994 USO1O60763 962 aaKnown RBP11.28□□□□□ -0.6
SCARB2-204ENST00000509994 OFD1O75665 1012 aa11.28□□□□□ -0.6
SCARB2-204ENST00000509994 FDPSP14324 419 aaKnown RBP11.28□□□□□ -0.6
SCARB2-204ENST00000509994 SLC11A1P49279 550 aa11.28□□□□□ -0.6
SCARB2-204ENST00000509994 NOTUMQ6P988 496 aa11.28□□□□□ -0.6
SCARB2-204ENST00000509994 MAEAQ7L5Y9 396 aa11.28□□□□□ -0.6
SCARB2-204ENST00000509994 DDX53Q86TM3 631 aaKnown RBP11.28□□□□□ -0.6
SCARB2-204ENST00000509994 TMEM173Q86WV6 379 aaPredicted RBP11.28□□□□□ -0.6
SCARB2-204ENST00000509994 CCDC83Q8IWF9 413 aa11.28□□□□□ -0.6
SCARB2-204ENST00000509994 HACE1Q8IYU2 909 aa11.28□□□□□ -0.6
SCARB2-204ENST00000509994 EDAQ92838 391 aa11.28□□□□□ -0.6
SCARB2-204ENST00000509994 PBXIP1Q96AQ6 731 aa11.28□□□□□ -0.6
SCARB2-204ENST00000509994 IGSF21Q96ID5 467 aa11.28□□□□□ -0.6
SCARB2-204ENST00000509994 TRAIPQ9BWF2 469 aa11.28□□□□□ -0.6
SCARB2-204ENST00000509994 EMILIN2Q9BXX0 1053 aa11.28□□□□□ -0.6
SCARB2-204ENST00000509994 ZBP1Q9H171 429 aa11.28□□□□□ -0.6
SCARB2-204ENST00000509994 MINDY3Q9H8M7 445 aa11.28□□□□□ -0.6
SCARB2-204ENST00000509994 KANSL3Q9P2N6 904 aa11.28□□□□□ -0.6
SCARB2-204ENST00000509994 FAN1Q9Y2M0 1017 aa11.28□□□□□ -0.6
SCARB2-204ENST00000509994 PRG3Q9Y2Y8 225 aaPredicted RBP11.28□□□□□ -0.6
SCARB2-204ENST00000509994 HCFC2Q9Y5Z7 792 aa11.28□□□□□ -0.6
SCARB2-204ENST00000509994 MUC6Q6W4X9 2439 aa11.28□□□□□ -0.6
SCARB2-204ENST00000509994 TMEM221A6NGB7 291 aa11.27□□□□□ -0.61
SCARB2-204ENST00000509994 POTEMA6NI47 508 aa11.27□□□□□ -0.61
SCARB2-204ENST00000509994 LRRIQ4A6NIV6 560 aa11.27□□□□□ -0.61
SCARB2-204ENST00000509994 M0R296 226 aa11.27□□□□□ -0.61
SCARB2-204ENST00000509994 CLASP2O75122 1294 aaKnown RBP11.27□□□□□ -0.61
SCARB2-204ENST00000509994 NR1I2O75469 434 aa11.27□□□□□ -0.61
SCARB2-204ENST00000509994 DGAT1O75907 488 aa11.27□□□□□ -0.61
SCARB2-204ENST00000509994 GALTP07902 379 aa11.27□□□□□ -0.61
SCARB2-204ENST00000509994 WEE2P0C1S8 567 aa11.27□□□□□ -0.61
SCARB2-204ENST00000509994 LIG1P18858 919 aa11.27□□□□□ -0.61
SCARB2-204ENST00000509994 KLRC2P26717 231 aa11.27□□□□□ -0.61
SCARB2-204ENST00000509994 OR1G1P47890 313 aa11.27□□□□□ -0.61
SCARB2-204ENST00000509994 SPIRE1Q08AE8 756 aa11.27□□□□□ -0.61
SCARB2-204ENST00000509994 GIT2Q14161 759 aa11.27□□□□□ -0.61
SCARB2-204ENST00000509994 ERICH6BQ5W0A0 696 aa11.27□□□□□ -0.61
SCARB2-204ENST00000509994 SYCE2Q6PIF2 218 aa11.27□□□□□ -0.61
SCARB2-204ENST00000509994 CABP7Q86V35 215 aa11.27□□□□□ -0.61
SCARB2-204ENST00000509994 ZNF280BQ86YH2 543 aa11.27□□□□□ -0.61
SCARB2-204ENST00000509994 FAM184AQ8NB25 1140 aa11.27□□□□□ -0.61
SCARB2-204ENST00000509994 ERMNQ8TAM6 284 aa11.27□□□□□ -0.61
SCARB2-204ENST00000509994 PIGOQ8TEQ8 1089 aa11.27□□□□□ -0.61
SCARB2-204ENST00000509994 C8orf76Q96K31 380 aa11.27□□□□□ -0.61
SCARB2-204ENST00000509994 RIPOR3Q96MK2 946 aa11.27□□□□□ -0.61
SCARB2-204ENST00000509994 POLR3FQ9H1D9 316 aaPredicted RBP11.27□□□□□ -0.61
SCARB2-204ENST00000509994 DZANK1Q9NVP4 752 aa11.27□□□□□ -0.61
SCARB2-204ENST00000509994 CDH22Q9UJ99 828 aa11.27□□□□□ -0.61
SCARB2-204ENST00000509994 DBR1Q9UK59 544 aaKnown RBP11.27□□□□□ -0.61
SCARB2-204ENST00000509994 ARIH1Q9Y4X5 557 aaPredicted RBP11.27□□□□□ -0.61
SCARB2-204ENST00000509994 WDFY4Q6ZS81 3184 aa11.27□□□□□ -0.61
SCARB2-204ENST00000509994 TECTAO75443 2155 aa11.26□□□□□ -0.61
SCARB2-204ENST00000509994 A0A087WWV3 80 aa11.26□□□□□ -0.61
SCARB2-204ENST00000509994 TSPAN1O60635 241 aa11.26□□□□□ -0.61
SCARB2-204ENST00000509994 ZNF623O75123 536 aa11.26□□□□□ -0.61
SCARB2-204ENST00000509994 SLITRK3O94933 977 aa11.26□□□□□ -0.61
SCARB2-204ENST00000509994 ALDH2P05091 517 aa11.26□□□□□ -0.61
SCARB2-204ENST00000509994 URODP06132 367 aa11.26□□□□□ -0.61
SCARB2-204ENST00000509994 CTSAP10619 480 aa11.26□□□□□ -0.61
SCARB2-204ENST00000509994 EPCAMP16422 314 aa11.26□□□□□ -0.61
SCARB2-204ENST00000509994 NCLP19338 710 aaKnown RBP11.26□□□□□ -0.61
SCARB2-204ENST00000509994 AXLP30530 894 aa11.26□□□□□ -0.61
SCARB2-204ENST00000509994 MLH1P40692 756 aa11.26□□□□□ -0.61
SCARB2-204ENST00000509994 MTHFRP42898 656 aa11.26□□□□□ -0.61
SCARB2-204ENST00000509994 ZXDAP98168 799 aa11.26□□□□□ -0.61
SCARB2-204ENST00000509994 ITIH3Q06033 890 aa11.26□□□□□ -0.61
SCARB2-204ENST00000509994 CAPSQ13938 189 aa11.26□□□□□ -0.61
SCARB2-204ENST00000509994 KIAA1841Q6NSI8 718 aa11.26□□□□□ -0.61
SCARB2-204ENST00000509994 TMEM184AQ6ZMB5 413 aa11.26□□□□□ -0.61
SCARB2-204ENST00000509994 AGMOQ6ZNB7 445 aa11.26□□□□□ -0.61
SCARB2-204ENST00000509994 TRIM67Q6ZTA4 783 aa11.26□□□□□ -0.61
SCARB2-204ENST00000509994 PPFIBP1Q86W92 1011 aa11.26□□□□□ -0.61
SCARB2-204ENST00000509994 C12orf76Q8N812 135 aaPredicted RBP11.26□□□□□ -0.61
SCARB2-204ENST00000509994 TDRD5Q8NAT2 981 aaKnown RBP11.26□□□□□ -0.61
SCARB2-204ENST00000509994 CNNM3Q8NE01 707 aa11.26□□□□□ -0.61
SCARB2-204ENST00000509994 BCL7CQ8WUZ0 217 aaPredicted RBP11.26□□□□□ -0.61
SCARB2-204ENST00000509994 SUSD6Q92537 303 aa11.26□□□□□ -0.61
SCARB2-204ENST00000509994 TNFRSF25Q93038 417 aa11.26□□□□□ -0.61
SCARB2-204ENST00000509994 NECTIN4Q96NY8 510 aa11.26□□□□□ -0.61
SCARB2-204ENST00000509994 EIF2AQ9BY44 585 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms