RNA–Protein interactions for RNA: ENST00000509903.5

CAST-228, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAST, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-228ENST00000509903 HS2ST1Q7LGA3 356 aa8.17□□□□□ -1.1
CAST-228ENST00000509903 FAM160B2Q86V87 743 aa8.17□□□□□ -1.1
CAST-228ENST00000509903 VPS36Q86VN1 386 aa8.17□□□□□ -1.1
CAST-228ENST00000509903 SLC5A5Q92911 643 aa8.17□□□□□ -1.1
CAST-228ENST00000509903 CRELD1Q96HD1 420 aa8.17□□□□□ -1.1
CAST-228ENST00000509903 ZNF577Q9BSK1 485 aa8.17□□□□□ -1.1
CAST-228ENST00000509903 LRRC1Q9BTT6 524 aa8.17□□□□□ -1.1
CAST-228ENST00000509903 WDR11Q9BZH6 1224 aa8.17□□□□□ -1.1
CAST-228ENST00000509903 RANBP17Q9H2T7 1088 aaKnown RBP8.17□□□□□ -1.1
CAST-228ENST00000509903 VCPKMTQ9H867 229 aa8.17□□□□□ -1.1
CAST-228ENST00000509903 PSD3Q9NYI0 1048 aa8.17□□□□□ -1.1
CAST-228ENST00000509903 SMARCAL1Q9NZC9 954 aa8.17□□□□□ -1.1
CAST-228ENST00000509903 EHD2Q9NZN4 543 aa8.17□□□□□ -1.1
CAST-228ENST00000509903 GCNT4Q9P109 453 aa8.17□□□□□ -1.1
CAST-228ENST00000509903 CALCOCO1Q9P1Z2 691 aa8.17□□□□□ -1.1
CAST-228ENST00000509903 HPCAL4Q9UM19 191 aa8.17□□□□□ -1.1
CAST-228ENST00000509903 VPS9D1Q9Y2B5 631 aa8.17□□□□□ -1.1
CAST-228ENST00000509903 SHTN1A0MZ66 631 aa8.17□□□□□ -1.1
CAST-228ENST00000509903 FLOT1O75955 427 aa8.17□□□□□ -1.1
CAST-228ENST00000509903 MYBL2P10244 700 aa8.17□□□□□ -1.1
CAST-228ENST00000509903 NMT1P30419 496 aaKnown RBP8.17□□□□□ -1.1
CAST-228ENST00000509903 AARSP49588 968 aaKnown RBP eCLIP8.17□□□□□ -1.1
CAST-228ENST00000509903 CASP4P49662 377 aa8.17□□□□□ -1.1
CAST-228ENST00000509903 PAK2Q13177 524 aa8.17□□□□□ -1.1
CAST-228ENST00000509903 EPHA7Q15375 998 aa8.17□□□□□ -1.1
CAST-228ENST00000509903 IFI16Q16666 785 aaKnown RBP8.17□□□□□ -1.1
CAST-228ENST00000509903 C1orf186Q6ZWK4 172 aa8.17□□□□□ -1.1
CAST-228ENST00000509903 FAM178BQ8IXR5 827 aa8.17□□□□□ -1.1
CAST-228ENST00000509903 FAM186BQ8IYM0 893 aa8.17□□□□□ -1.1
CAST-228ENST00000509903 ARMC2Q8NEN0 867 aa8.17□□□□□ -1.1
CAST-228ENST00000509903 TAF4BQ92750 862 aa8.17□□□□□ -1.1
CAST-228ENST00000509903 SLC35C1Q96A29 364 aa8.17□□□□□ -1.1
CAST-228ENST00000509903 ALKBH8Q96BT7 664 aaKnown RBP8.17□□□□□ -1.1
CAST-228ENST00000509903 NACC1Q96RE7 527 aa8.17□□□□□ -1.1
CAST-228ENST00000509903 TEKT3Q9BXF9 490 aa8.17□□□□□ -1.1
CAST-228ENST00000509903 PACSIN1Q9BY11 444 aa8.17□□□□□ -1.1
CAST-228ENST00000509903 PCDH12Q9NPG4 1184 aa8.17□□□□□ -1.1
CAST-228ENST00000509903 SEL1LQ9UBV2 794 aa8.17□□□□□ -1.1
CAST-228ENST00000509903 GGT7Q9UJ14 662 aa8.17□□□□□ -1.1
CAST-228ENST00000509903 PCDHGC5Q9Y5F6 944 aa8.17□□□□□ -1.1
CAST-228ENST00000509903 FRMPD4Q14CM0 1322 aa8.16□□□□□ -1.1
CAST-228ENST00000509903 VIL1P09327 827 aaKnown RBP8.16□□□□□ -1.1
CAST-228ENST00000509903 MUTP22033 750 aa8.16□□□□□ -1.1
CAST-228ENST00000509903 PSMC2P35998 433 aaKnown RBP8.16□□□□□ -1.1
CAST-228ENST00000509903 NOP2P46087 812 aaKnown RBP8.16□□□□□ -1.1
CAST-228ENST00000509903 SLC7A5Q01650 507 aa8.16□□□□□ -1.1
CAST-228ENST00000509903 EZH2Q15910 746 aaKnown RBP8.16□□□□□ -1.1
CAST-228ENST00000509903 SLC15A2Q16348 729 aa8.16□□□□□ -1.1
CAST-228ENST00000509903 SH3PXD2AQ5TCZ1 1133 aa8.16□□□□□ -1.1
CAST-228ENST00000509903 MIGA2Q7L4E1 593 aa8.16□□□□□ -1.1
CAST-228ENST00000509903 ZNF571Q7Z3V5 609 aaPredicted RBP8.16□□□□□ -1.1
CAST-228ENST00000509903 IRF2BP2Q7Z5L9 587 aa8.16□□□□□ -1.1
CAST-228ENST00000509903 RTKN2Q8IZC4 609 aa8.16□□□□□ -1.1
CAST-228ENST00000509903 HDAC7Q8WUI4 952 aa8.16□□□□□ -1.1
CAST-228ENST00000509903 TMEM39BQ9GZU3 492 aa8.16□□□□□ -1.1
CAST-228ENST00000509903 BCAS3Q9H6U6 928 aa8.16□□□□□ -1.1
CAST-228ENST00000509903 PRDM16Q9HAZ2 1276 aa8.16□□□□□ -1.1
CAST-228ENST00000509903 RBM12Q9NTZ6 932 aaKnown RBP8.16□□□□□ -1.1
CAST-228ENST00000509903 STK32BQ9NY57 414 aa8.16□□□□□ -1.1
CAST-228ENST00000509903 GABBR1Q9UBS5 961 aa8.16□□□□□ -1.1
CAST-228ENST00000509903 FEM1BQ9UK73 627 aa8.16□□□□□ -1.1
CAST-228ENST00000509903 FBXL5Q9UKA1 691 aa8.16□□□□□ -1.1
CAST-228ENST00000509903 FRMD4BQ9Y2L6 1034 aa8.16□□□□□ -1.1
CAST-228ENST00000509903 USP3Q9Y6I4 520 aa8.16□□□□□ -1.1
CAST-228ENST00000509903 UBE4BO95155 1302 aa8.16□□□□□ -1.1
CAST-228ENST00000509903 GTPBP10A4D1E9 387 aaKnown RBP8.15□□□□□ -1.1
CAST-228ENST00000509903 ARHGEF35A5YM69 484 aa8.15□□□□□ -1.1
CAST-228ENST00000509903 GOLGA6BA6NDN3 693 aa8.15□□□□□ -1.1
CAST-228ENST00000509903 IPO5O00410 1097 aaKnown RBP8.15□□□□□ -1.1
CAST-228ENST00000509903 TGFB1I1O43294 461 aa8.15□□□□□ -1.1
CAST-228ENST00000509903 CAPN2P17655 700 aa8.15□□□□□ -1.1
CAST-228ENST00000509903 ANXA13P27216 316 aa8.15□□□□□ -1.1
CAST-228ENST00000509903 EPHB4P54760 987 aa8.15□□□□□ -1.1
CAST-228ENST00000509903 MRPS25P82663 173 aaKnown RBP8.15□□□□□ -1.1
CAST-228ENST00000509903 NBPF20Q3BBV1 942 aa8.15□□□□□ -1.1
CAST-228ENST00000509903 ZC2HC1CQ53FD0 456 aaPredicted RBP8.15□□□□□ -1.1
CAST-228ENST00000509903 GLE1Q53GS7 698 aaKnown RBP8.15□□□□□ -1.1
CAST-228ENST00000509903 ODR4Q5SWX8 454 aa8.15□□□□□ -1.1
CAST-228ENST00000509903 ALKBH5Q6P6C2 394 aaKnown RBP8.15□□□□□ -1.1
CAST-228ENST00000509903 LEKR1Q6ZMV7 388 aa8.15□□□□□ -1.1
CAST-228ENST00000509903 LDHDQ86WU2 507 aa8.15□□□□□ -1.1
CAST-228ENST00000509903 ETFBKMTQ8IXQ9 262 aa8.15□□□□□ -1.1
CAST-228ENST00000509903 TTLL6Q8N841 843 aa8.15□□□□□ -1.1
CAST-228ENST00000509903 AENQ8WTP8 325 aaKnown RBP8.15□□□□□ -1.1
CAST-228ENST00000509903 MS4A14Q96JA4 679 aa8.15□□□□□ -1.1
CAST-228ENST00000509903 CITED4Q96RK1 184 aa8.15□□□□□ -1.1
CAST-228ENST00000509903 LXNQ9BS40 222 aa8.15□□□□□ -1.1
CAST-228ENST00000509903 UNC45AQ9H3U1 944 aa8.15□□□□□ -1.1
CAST-228ENST00000509903 FAM204AQ9H8W3 233 aa8.15□□□□□ -1.1
CAST-228ENST00000509903 FBXO28Q9NVF7 368 aa8.15□□□□□ -1.1
CAST-228ENST00000509903 KCND2Q9NZV8 630 aa8.15□□□□□ -1.1
CAST-228ENST00000509903 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.15□□□□□ -1.1
CAST-228ENST00000509903 NAGPAQ9UK23 515 aa8.15□□□□□ -1.1
CAST-228ENST00000509903 ODF2LQ9ULJ1 636 aa8.15□□□□□ -1.1
CAST-228ENST00000509903 AK5Q9Y6K8 562 aa8.15□□□□□ -1.1
CAST-228ENST00000509903 KIF13BQ9NQT8 1826 aa8.15□□□□□ -1.1
CAST-228ENST00000509903 PSME4Q14997 1843 aa8.15□□□□□ -1.1
CAST-228ENST00000509903 GRID2IPA4D2P6 1211 aa8.15□□□□□ -1.11
CAST-228ENST00000509903 BTNL10A8MVZ5 291 aa8.15□□□□□ -1.11
CAST-228ENST00000509903 DDX39AO00148 427 aaKnown RBP8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms