RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 GNL2Q13823 731 aaKnown RBP19.93■□□□□ 0.78
TPM3-220ENST00000509601 TFDP1Q14186 410 aa19.93■□□□□ 0.78
TPM3-220ENST00000509601 PCBP1Q15365 356 aaKnown RBP eCLIP19.93■□□□□ 0.78
TPM3-220ENST00000509601 PLPP4Q5VZY2 271 aa19.93■□□□□ 0.78
TPM3-220ENST00000509601 GLB1LQ6UWU2 654 aa19.93■□□□□ 0.78
TPM3-220ENST00000509601 MAEAQ7L5Y9 396 aa19.93■□□□□ 0.78
TPM3-220ENST00000509601 TMEM173Q86WV6 379 aaPredicted RBP19.93■□□□□ 0.78
TPM3-220ENST00000509601 ZNF280BQ86YH2 543 aa19.93■□□□□ 0.78
TPM3-220ENST00000509601 TCF25Q9BQ70 676 aa19.93■□□□□ 0.78
TPM3-220ENST00000509601 NFKBIZQ9BYH8 718 aa19.93■□□□□ 0.78
TPM3-220ENST00000509601 RNF39Q9H2S5 420 aa19.93■□□□□ 0.78
TPM3-220ENST00000509601 NGRNQ9NPE2 291 aaKnown RBP19.93■□□□□ 0.78
TPM3-220ENST00000509601 PRKAG3Q9UGI9 489 aa19.93■□□□□ 0.78
TPM3-220ENST00000509601 NOL7Q9UMY1 257 aaKnown RBP19.93■□□□□ 0.78
TPM3-220ENST00000509601 FAM50BQ9Y247 325 aa19.93■□□□□ 0.78
TPM3-220ENST00000509601 PCDHB6Q9Y5E3 794 aa19.93■□□□□ 0.78
TPM3-220ENST00000509601 PI4K2BG5E9Z4 385 aa19.92■□□□□ 0.78
TPM3-220ENST00000509601 INO80B-WBP1J3KQ70 363 aa19.92■□□□□ 0.78
TPM3-220ENST00000509601 USO1O60763 962 aaKnown RBP19.92■□□□□ 0.78
TPM3-220ENST00000509601 DDHD2O94830 711 aa19.92■□□□□ 0.78
TPM3-220ENST00000509601 AXLP30530 894 aa19.92■□□□□ 0.78
TPM3-220ENST00000509601 SMAD4Q13485 552 aaKnown RBP19.92■□□□□ 0.78
TPM3-220ENST00000509601 PDIA5Q14554 519 aa19.92■□□□□ 0.78
TPM3-220ENST00000509601 POTEGQ6S5H5 508 aa19.92■□□□□ 0.78
TPM3-220ENST00000509601 TMEM184AQ6ZMB5 413 aa19.92■□□□□ 0.78
TPM3-220ENST00000509601 TMC7Q7Z402 723 aa19.92■□□□□ 0.78
TPM3-220ENST00000509601 MRPL43Q8N983 215 aaKnown RBP19.92■□□□□ 0.78
TPM3-220ENST00000509601 CPB2Q96IY4 423 aa19.92■□□□□ 0.78
TPM3-220ENST00000509601 CDCA3Q99618 268 aaPredicted RBP19.92■□□□□ 0.78
TPM3-220ENST00000509601 EIF2AQ9BY44 585 aaKnown RBP19.92■□□□□ 0.78
TPM3-220ENST00000509601 POLR3FQ9H1D9 316 aaPredicted RBP19.92■□□□□ 0.78
TPM3-220ENST00000509601 DNAJB4Q9UDY4 337 aa19.92■□□□□ 0.78
TPM3-220ENST00000509601 BARX2Q9UMQ3 279 aaPredicted RBP19.92■□□□□ 0.78
TPM3-220ENST00000509601 INPP5FQ9Y2H2 1132 aa19.92■□□□□ 0.78
TPM3-220ENST00000509601 MUTP22033 750 aa19.91■□□□□ 0.78
TPM3-220ENST00000509601 PTGDRQ13258 359 aa19.91■□□□□ 0.78
TPM3-220ENST00000509601 IL17AQ16552 155 aa19.91■□□□□ 0.78
TPM3-220ENST00000509601 ADHFE1Q8IWW8 467 aa19.91■□□□□ 0.78
TPM3-220ENST00000509601 ERMNQ8TAM6 284 aa19.91■□□□□ 0.78
TPM3-220ENST00000509601 BCL7CQ8WUZ0 217 aaPredicted RBP19.91■□□□□ 0.78
TPM3-220ENST00000509601 IGSF21Q96ID5 467 aa19.91■□□□□ 0.78
TPM3-220ENST00000509601 CCDC43Q96MW1 224 aaKnown RBP19.91■□□□□ 0.78
TPM3-220ENST00000509601 TBC1D32Q96NH3 1257 aa19.91■□□□□ 0.78
TPM3-220ENST00000509601 CSRNP2Q9H175 543 aa19.91■□□□□ 0.78
TPM3-220ENST00000509601 RSAD1Q9HA92 442 aa19.91■□□□□ 0.78
TPM3-220ENST00000509601 ENTPD7Q9NQZ7 604 aa19.91■□□□□ 0.78
TPM3-220ENST00000509601 IPPQ9Y573 584 aa19.91■□□□□ 0.78
TPM3-220ENST00000509601 ZC3H11AO75152 810 aaKnown RBP eCLIP19.9■□□□□ 0.78
TPM3-220ENST00000509601 ERLIN2O94905 339 aa19.9■□□□□ 0.78
TPM3-220ENST00000509601 ARF4P18085 180 aaPredicted RBP19.9■□□□□ 0.78
TPM3-220ENST00000509601 CYP11B2P19099 503 aa19.9■□□□□ 0.78
TPM3-220ENST00000509601 SSTR3P32745 418 aaPredicted RBP19.9■□□□□ 0.78
TPM3-220ENST00000509601 SLC11A1P49279 550 aa19.9■□□□□ 0.78
TPM3-220ENST00000509601 PADI6Q6TGC4 694 aa19.9■□□□□ 0.78
TPM3-220ENST00000509601 IGSF22Q8N9C0 903 aa19.9■□□□□ 0.78
TPM3-220ENST00000509601 SMRP1Q8NCR6 262 aa19.9■□□□□ 0.78
TPM3-220ENST00000509601 CNNM3Q8NE01 707 aa19.9■□□□□ 0.78
TPM3-220ENST00000509601 CCDC51Q96ER9 411 aa19.9■□□□□ 0.78
TPM3-220ENST00000509601 C1QTNF1Q9BXJ1 281 aa19.9■□□□□ 0.78
TPM3-220ENST00000509601 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.9■□□□□ 0.78
TPM3-220ENST00000509601 MIOSQ9NXC5 875 aa19.9■□□□□ 0.78
TPM3-220ENST00000509601 LRWD1Q9UFC0 647 aa19.9■□□□□ 0.78
TPM3-220ENST00000509601 CNTNAP2Q9UHC6 1331 aa19.9■□□□□ 0.78
TPM3-220ENST00000509601 A0A1B0GUA9 196 aa19.89■□□□□ 0.77
TPM3-220ENST00000509601 C2orf71A6NGG8 1288 aa19.89■□□□□ 0.77
TPM3-220ENST00000509601 B4GALT5O43286 388 aa19.89■□□□□ 0.77
TPM3-220ENST00000509601 CXCL14O95715 111 aa19.89■□□□□ 0.77
TPM3-220ENST00000509601 ITGA4P13612 1032 aa19.89■□□□□ 0.77
TPM3-220ENST00000509601 GJB2P29033 226 aa19.89■□□□□ 0.77
TPM3-220ENST00000509601 NOTUMQ6P988 496 aa19.89■□□□□ 0.77
TPM3-220ENST00000509601 DDX53Q86TM3 631 aaKnown RBP19.89■□□□□ 0.77
TPM3-220ENST00000509601 MCPH1Q8NEM0 835 aa19.89■□□□□ 0.77
TPM3-220ENST00000509601 BSNDQ8WZ55 320 aa19.89■□□□□ 0.77
TPM3-220ENST00000509601 TMEM169Q96HH4 297 aa19.89■□□□□ 0.77
TPM3-220ENST00000509601 VN1R3Q9BXE9 311 aa19.89■□□□□ 0.77
TPM3-220ENST00000509601 GBP3Q9H0R5 595 aa19.89■□□□□ 0.77
TPM3-220ENST00000509601 S1PR5Q9H228 398 aa19.89■□□□□ 0.77
TPM3-220ENST00000509601 FZD8Q9H461 694 aa19.89■□□□□ 0.77
TPM3-220ENST00000509601 UPF2Q9HAU5 1272 aaKnown RBP19.89■□□□□ 0.77
TPM3-220ENST00000509601 POLD4Q9HCU8 107 aa19.89■□□□□ 0.77
TPM3-220ENST00000509601 KANSL3Q9P2N6 904 aa19.89■□□□□ 0.77
TPM3-220ENST00000509601 HES2Q9Y543 173 aa19.89■□□□□ 0.77
TPM3-220ENST00000509601 INPPL1O15357 1258 aa19.88■□□□□ 0.77
TPM3-220ENST00000509601 POMCP01189 267 aa19.88■□□□□ 0.77
TPM3-220ENST00000509601 ALDH2P05091 517 aa19.88■□□□□ 0.77
TPM3-220ENST00000509601 CCT6AP40227 531 aaKnown RBP19.88■□□□□ 0.77
TPM3-220ENST00000509601 RNASELQ05823 741 aaKnown RBP19.88■□□□□ 0.77
TPM3-220ENST00000509601 NCBP1Q09161 790 aaKnown RBP19.88■□□□□ 0.77
TPM3-220ENST00000509601 SMC1AQ14683 1233 aaKnown RBP19.88■□□□□ 0.77
TPM3-220ENST00000509601 CDR2LQ86X02 465 aaPredicted RBP19.88■□□□□ 0.77
TPM3-220ENST00000509601 VPS52Q8N1B4 723 aa19.88■□□□□ 0.77
TPM3-220ENST00000509601 ZBP1Q9H171 429 aa19.88■□□□□ 0.77
TPM3-220ENST00000509601 UBN1Q9NPG3 1134 aa19.88■□□□□ 0.77
TPM3-220ENST00000509601 C11orf16Q9NQ32 467 aa19.88■□□□□ 0.77
TPM3-220ENST00000509601 KIAA1024Q9UPX6 916 aa19.88■□□□□ 0.77
TPM3-220ENST00000509601 ARHGEF35A5YM69 484 aa19.87■□□□□ 0.77
TPM3-220ENST00000509601 CARNS1A5YM72 827 aa19.87■□□□□ 0.77
TPM3-220ENST00000509601 TTLL13PA6NNM8 815 aa19.87■□□□□ 0.77
TPM3-220ENST00000509601 CLASP2O75122 1294 aaKnown RBP19.87■□□□□ 0.77
TPM3-220ENST00000509601 MCM2P49736 904 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms