RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 SLC12A8A0AV02 714 aa3.57□□□□□ -1.84
XRCC4-204ENST00000509268 MAFGO15525 162 aa3.57□□□□□ -1.84
XRCC4-204ENST00000509268 RASGRP1O95267 797 aa3.57□□□□□ -1.84
XRCC4-204ENST00000509268 PRLP01236 227 aa3.57□□□□□ -1.84
XRCC4-204ENST00000509268 SPATA31D3P0C874 917 aa3.57□□□□□ -1.84
XRCC4-204ENST00000509268 FNTBP49356 437 aa3.57□□□□□ -1.84
XRCC4-204ENST00000509268 RGS3P49796 1198 aa3.57□□□□□ -1.84
XRCC4-204ENST00000509268 BCAR1P56945 870 aa3.57□□□□□ -1.84
XRCC4-204ENST00000509268 MXRA7P84157 204 aa3.57□□□□□ -1.84
XRCC4-204ENST00000509268 SLC6A3Q01959 620 aa3.57□□□□□ -1.84
XRCC4-204ENST00000509268 OCA2Q04671 838 aa3.57□□□□□ -1.84
XRCC4-204ENST00000509268 SPATA31D4Q6ZUB0 917 aa3.57□□□□□ -1.84
XRCC4-204ENST00000509268 ASB10Q8WXI3 467 aa3.57□□□□□ -1.84
XRCC4-204ENST00000509268 ZNF669Q96BR6 464 aaPredicted RBP3.57□□□□□ -1.84
XRCC4-204ENST00000509268 ACBD3Q9H3P7 528 aa3.57□□□□□ -1.84
XRCC4-204ENST00000509268 CAPN10Q9HC96 672 aa3.57□□□□□ -1.84
XRCC4-204ENST00000509268 ACSS2Q9NR19 701 aa3.57□□□□□ -1.84
XRCC4-204ENST00000509268 PODXL2Q9NZ53 605 aa3.57□□□□□ -1.84
XRCC4-204ENST00000509268 R3HCC1Q9Y3T6 440 aaKnown RBP3.57□□□□□ -1.84
XRCC4-204ENST00000509268 LRRC3CA6NJW4 275 aa3.56□□□□□ -1.84
XRCC4-204ENST00000509268 APPP05067 770 aa3.56□□□□□ -1.84
XRCC4-204ENST00000509268 HNRNPLP14866 589 aaKnown RBP eCLIP3.56□□□□□ -1.84
XRCC4-204ENST00000509268 SUMO1P63165 101 aaKnown RBP3.56□□□□□ -1.84
XRCC4-204ENST00000509268 GABREP78334 506 aa3.56□□□□□ -1.84
XRCC4-204ENST00000509268 SIM1P81133 766 aaPredicted RBP3.56□□□□□ -1.84
XRCC4-204ENST00000509268 MRPL49Q13405 166 aaKnown RBP3.56□□□□□ -1.84
XRCC4-204ENST00000509268 TP53BP2Q13625 1128 aa3.56□□□□□ -1.84
XRCC4-204ENST00000509268 PIK3R6Q5UE93 754 aa3.56□□□□□ -1.84
XRCC4-204ENST00000509268 SLFN12LQ6IEE8 588 aa3.56□□□□□ -1.84
XRCC4-204ENST00000509268 UIMC1Q96RL1 719 aa3.56□□□□□ -1.84
XRCC4-204ENST00000509268 RNF181Q9P0P0 153 aa3.56□□□□□ -1.84
XRCC4-204ENST00000509268 DNAI1Q9UI46 699 aa3.56□□□□□ -1.84
XRCC4-204ENST00000509268 PCDHA9Q9Y5H5 950 aa3.56□□□□□ -1.84
XRCC4-204ENST00000509268 ARHGEF17Q96PE2 2063 aaPredicted RBP3.56□□□□□ -1.84
XRCC4-204ENST00000509268 WDR91A4D1P6 747 aa3.55□□□□□ -1.84
XRCC4-204ENST00000509268 TRIM38O00635 465 aa3.55□□□□□ -1.84
XRCC4-204ENST00000509268 FSBPO95073 299 aa3.55□□□□□ -1.84
XRCC4-204ENST00000509268 RNASE9P60153 205 aaKnown RBP3.55□□□□□ -1.84
XRCC4-204ENST00000509268 DDR2Q16832 855 aa3.55□□□□□ -1.84
XRCC4-204ENST00000509268 DRICH1Q6PGQ1 229 aaPredicted RBP3.55□□□□□ -1.84
XRCC4-204ENST00000509268 GPRIN1Q7Z2K8 1008 aa3.55□□□□□ -1.84
XRCC4-204ENST00000509268 CISD2Q8N5K1 135 aaKnown RBP3.55□□□□□ -1.84
XRCC4-204ENST00000509268 RPGRQ92834 1020 aaKnown RBP3.55□□□□□ -1.84
XRCC4-204ENST00000509268 ADAM2Q99965 735 aa3.55□□□□□ -1.84
XRCC4-204ENST00000509268 LSM14BQ9BX40 385 aaKnown RBP3.55□□□□□ -1.84
XRCC4-204ENST00000509268 SLC17A6Q9P2U8 582 aa3.55□□□□□ -1.84
XRCC4-204ENST00000509268 CNTNAP2Q9UHC6 1331 aa3.55□□□□□ -1.84
XRCC4-204ENST00000509268 UNC119BA6NIH7 251 aa3.55□□□□□ -1.84
XRCC4-204ENST00000509268 PRR5-ARHGAP8B1AHC4 643 aa3.55□□□□□ -1.84
XRCC4-204ENST00000509268 LEFTY2O00292 366 aa3.55□□□□□ -1.84
XRCC4-204ENST00000509268 SPDEFO95238 335 aa3.55□□□□□ -1.84
XRCC4-204ENST00000509268 NHLH2Q02577 135 aa3.55□□□□□ -1.84
XRCC4-204ENST00000509268 FSTL4Q6MZW2 842 aa3.55□□□□□ -1.84
XRCC4-204ENST00000509268 PTF1AQ7RTS3 328 aa3.55□□□□□ -1.84
XRCC4-204ENST00000509268 IPO9Q96P70 1041 aaKnown RBP3.55□□□□□ -1.84
XRCC4-204ENST00000509268 CELF4Q9BZC1 486 aaKnown RBP3.55□□□□□ -1.84
XRCC4-204ENST00000509268 CCSER2Q9H7U1 834 aa3.55□□□□□ -1.84
XRCC4-204ENST00000509268 ST7Q9NRC1 585 aa3.55□□□□□ -1.84
XRCC4-204ENST00000509268 SALL3Q9BXA9 1300 aa3.54□□□□□ -1.84
XRCC4-204ENST00000509268 CRTAMO95727 393 aa3.54□□□□□ -1.84
XRCC4-204ENST00000509268 C6orf222P0C671 652 aaPredicted RBP3.54□□□□□ -1.84
XRCC4-204ENST00000509268 ITGAMP11215 1152 aa3.54□□□□□ -1.84
XRCC4-204ENST00000509268 HSP90B1P14625 803 aaKnown RBP3.54□□□□□ -1.84
XRCC4-204ENST00000509268 FDXRP22570 491 aa3.54□□□□□ -1.84
XRCC4-204ENST00000509268 KRTAP5-9P26371 169 aa3.54□□□□□ -1.84
XRCC4-204ENST00000509268 TTC38Q5R3I4 469 aa3.54□□□□□ -1.84
XRCC4-204ENST00000509268 SLC44A3Q8N4M1 653 aa3.54□□□□□ -1.84
XRCC4-204ENST00000509268 OR5M3Q8NGP4 307 aa3.54□□□□□ -1.84
XRCC4-204ENST00000509268 ZBTB9Q96C00 473 aa3.54□□□□□ -1.84
XRCC4-204ENST00000509268 IL17RAQ96F46 866 aa3.54□□□□□ -1.84
XRCC4-204ENST00000509268 ALOXE3Q9BYJ1 711 aa3.54□□□□□ -1.84
XRCC4-204ENST00000509268 UBA6A0AVT1 1052 aaPredicted RBP3.53□□□□□ -1.84
XRCC4-204ENST00000509268 MARCH11A6NNE9 402 aa3.53□□□□□ -1.84
XRCC4-204ENST00000509268 NPTXRO95502 500 aa3.53□□□□□ -1.84
XRCC4-204ENST00000509268 BMP15O95972 392 aa3.53□□□□□ -1.84
XRCC4-204ENST00000509268 FOSP01100 380 aaPredicted RBP3.53□□□□□ -1.84
XRCC4-204ENST00000509268 MGAT1P26572 445 aa3.53□□□□□ -1.84
XRCC4-204ENST00000509268 RESTQ13127 1097 aa3.53□□□□□ -1.84
XRCC4-204ENST00000509268 ZNF788Q6ZQV5 615 aa3.53□□□□□ -1.84
XRCC4-204ENST00000509268 OVCH1Q7RTY7 1134 aa3.53□□□□□ -1.84
XRCC4-204ENST00000509268 CELF2-AS1Q8N7Q2 184 aa3.53□□□□□ -1.84
XRCC4-204ENST00000509268 CDC6Q99741 560 aa3.53□□□□□ -1.84
XRCC4-204ENST00000509268 SPATA9Q9BWV2 254 aa3.53□□□□□ -1.84
XRCC4-204ENST00000509268 USP36Q9P275 1121 aaKnown RBP3.53□□□□□ -1.84
XRCC4-204ENST00000509268 FPGT-TNNI3KV9GXZ4 949 aa3.53□□□□□ -1.84
XRCC4-204ENST00000509268 TRBV23-1A0A0A0MS06 115 aa3.52□□□□□ -1.85
XRCC4-204ENST00000509268 A0A0A6YYJ9 748 aa3.52□□□□□ -1.85
XRCC4-204ENST00000509268 RBP3P10745 1247 aa3.52□□□□□ -1.85
XRCC4-204ENST00000509268 CCKBRP32239 447 aa3.52□□□□□ -1.85
XRCC4-204ENST00000509268 PTGER1P34995 402 aa3.52□□□□□ -1.85
XRCC4-204ENST00000509268 RANGAP1P46060 587 aaPredicted RBP3.52□□□□□ -1.85
XRCC4-204ENST00000509268 GZMKP49863 264 aa3.52□□□□□ -1.85
XRCC4-204ENST00000509268 PDCD4Q53EL6 469 aaKnown RBP3.52□□□□□ -1.85
XRCC4-204ENST00000509268 Q6ZNX1 250 aa3.52□□□□□ -1.85
XRCC4-204ENST00000509268 PDPRQ8NCN5 879 aa3.52□□□□□ -1.85
XRCC4-204ENST00000509268 ZNF408Q9H9D4 720 aa3.52□□□□□ -1.85
XRCC4-204ENST00000509268 ING3Q9NXR8 418 aa3.52□□□□□ -1.85
XRCC4-204ENST00000509268 FOXJ2Q9P0K8 574 aa3.52□□□□□ -1.85
XRCC4-204ENST00000509268 IGKV2-30P06310 120 aa3.51□□□□□ -1.85
XRCC4-204ENST00000509268 CELA2AP08217 269 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms