RNA–Protein interactions for RNA: ENST00000509165.1

NFKB1-208, Transcript of nuclear factor kappa B subunit 1, human

TSL 5

Gene NFKB1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NFKB1-208	ENST00000509165	GFM2	Q969S9	779 aa	Known RBP	5.77	□□□□□ -1.49
NFKB1-208	ENST00000509165	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	5.77	□□□□□ -1.49
NFKB1-208	ENST00000509165	WDR92	Q96MX6	357 aa		5.77	□□□□□ -1.49
NFKB1-208	ENST00000509165	KLC2	Q9H0B6	622 aa		5.77	□□□□□ -1.49
NFKB1-208	ENST00000509165	IFT22	Q9H7X7	185 aa		5.77	□□□□□ -1.49
NFKB1-208	ENST00000509165	DNAI1	Q9UI46	699 aa		5.77	□□□□□ -1.49
NFKB1-208	ENST00000509165	STRCP1	A6NGW2	1772 aa		5.77	□□□□□ -1.49
NFKB1-208	ENST00000509165	SHANK2	Q9UPX8	1470 aa		5.77	□□□□□ -1.49
NFKB1-208	ENST00000509165	RAPGEF2	Q9Y4G8	1499 aa		5.77	□□□□□ -1.49
NFKB1-208	ENST00000509165	SUPT6H	Q7KZ85	1726 aa	Known RBP	5.77	□□□□□ -1.49
NFKB1-208	ENST00000509165	PTPRK	Q15262	1439 aa		5.76	□□□□□ -1.49
NFKB1-208	ENST00000509165	CPS1	P31327	1500 aa		5.76	□□□□□ -1.49
NFKB1-208	ENST00000509165	ZEB2	O60315	1214 aa		5.76	□□□□□ -1.49
NFKB1-208	ENST00000509165	SELENOP	P49908	381 aa		5.76	□□□□□ -1.49
NFKB1-208	ENST00000509165	DDB1	Q16531	1140 aa		5.76	□□□□□ -1.49
NFKB1-208	ENST00000509165	ATP13A4	Q4VNC1	1196 aa		5.76	□□□□□ -1.49
NFKB1-208	ENST00000509165	ZNF585A	Q6P3V2	769 aa		5.76	□□□□□ -1.49
NFKB1-208	ENST00000509165	C11orf74	Q86VG3	221 aa		5.76	□□□□□ -1.49
NFKB1-208	ENST00000509165	RASSF3	Q86WH2	238 aa		5.76	□□□□□ -1.49
NFKB1-208	ENST00000509165	CXorf67	Q86X51	503 aa	Predicted RBP	5.76	□□□□□ -1.49
NFKB1-208	ENST00000509165	LYSMD2	Q8IV50	215 aa		5.76	□□□□□ -1.49
NFKB1-208	ENST00000509165	RABGGTA	Q92696	567 aa		5.76	□□□□□ -1.49
NFKB1-208	ENST00000509165	USP7	Q93009	1102 aa		5.76	□□□□□ -1.49
NFKB1-208	ENST00000509165	GPHA2	Q96T91	129 aa		5.76	□□□□□ -1.49
NFKB1-208	ENST00000509165	OSBPL6	Q9BZF3	934 aa		5.76	□□□□□ -1.49
NFKB1-208	ENST00000509165	SLC6A15	Q9H2J7	730 aa		5.76	□□□□□ -1.49
NFKB1-208	ENST00000509165	C12orf65	Q9H3J6	166 aa	Known RBP	5.76	□□□□□ -1.49
NFKB1-208	ENST00000509165	TSC22D4	Q9Y3Q8	395 aa		5.76	□□□□□ -1.49
NFKB1-208	ENST00000509165	PPP2R3B	Q9Y5P8	575 aa		5.76	□□□□□ -1.49
NFKB1-208	ENST00000509165	PLA2R1	Q13018	1463 aa		5.76	□□□□□ -1.49
NFKB1-208	ENST00000509165	VWDE	Q8N2E2	1590 aa		5.76	□□□□□ -1.49
NFKB1-208	ENST00000509165	ZNF142	P52746	1687 aa	Predicted RBP	5.75	□□□□□ -1.49
NFKB1-208	ENST00000509165	PRSS38	A1L453	326 aa		5.75	□□□□□ -1.49
NFKB1-208	ENST00000509165	EYA4	O95677	639 aa		5.75	□□□□□ -1.49
NFKB1-208	ENST00000509165	HNRNPL	P14866	589 aa	Known RBP eCLIP	5.75	□□□□□ -1.49	4e-7	■■□□□ 13
NFKB1-208	ENST00000509165	SOX5	P35711	763 aa		5.75	□□□□□ -1.49
NFKB1-208	ENST00000509165	RPS19	P39019	145 aa	Known RBP	5.75	□□□□□ -1.49
NFKB1-208	ENST00000509165	MANF	P55145	182 aa	Known RBP	5.75	□□□□□ -1.49
NFKB1-208	ENST00000509165	STRN3	Q13033	797 aa		5.75	□□□□□ -1.49
NFKB1-208	ENST00000509165	FRMD7	Q6ZUT3	714 aa		5.75	□□□□□ -1.49
NFKB1-208	ENST00000509165	KRT26	Q7Z3Y9	468 aa		5.75	□□□□□ -1.49
NFKB1-208	ENST00000509165	ADGRE4P	Q86SQ3	457 aa		5.75	□□□□□ -1.49
NFKB1-208	ENST00000509165	SLC41A1	Q8IVJ1	513 aa		5.75	□□□□□ -1.49
NFKB1-208	ENST00000509165	SHCBP1	Q8NEM2	672 aa		5.75	□□□□□ -1.49
NFKB1-208	ENST00000509165	CHAC2	Q8WUX2	184 aa		5.75	□□□□□ -1.49
NFKB1-208	ENST00000509165	OR14A2	Q96R54	314 aa		5.75	□□□□□ -1.49
NFKB1-208	ENST00000509165	NOL10	Q9BSC4	688 aa	Known RBP	5.75	□□□□□ -1.49
NFKB1-208	ENST00000509165	NELFA	Q9H3P2	528 aa		5.75	□□□□□ -1.49
NFKB1-208	ENST00000509165	DEF6	Q9H4E7	631 aa		5.75	□□□□□ -1.49
NFKB1-208	ENST00000509165	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	5.75	□□□□□ -1.49
NFKB1-208	ENST00000509165	RBM8A	Q9Y5S9	174 aa	Known RBP	5.75	□□□□□ -1.49
NFKB1-208	ENST00000509165	NEURL4	Q96JN8	1562 aa		5.75	□□□□□ -1.49
NFKB1-208	ENST00000509165	MYO3A	Q8NEV4	1616 aa		5.74	□□□□□ -1.49
NFKB1-208	ENST00000509165	AKAP8	O43823	692 aa	Known RBP	5.74	□□□□□ -1.49
NFKB1-208	ENST00000509165	SEC24D	O94855	1032 aa	Predicted RBP	5.74	□□□□□ -1.49
NFKB1-208	ENST00000509165	PCDH8	O95206	1070 aa		5.74	□□□□□ -1.49
NFKB1-208	ENST00000509165	POU3F3	P20264	500 aa	Predicted RBP	5.74	□□□□□ -1.49
NFKB1-208	ENST00000509165	COMT	P21964	271 aa		5.74	□□□□□ -1.49
NFKB1-208	ENST00000509165	FOXL1	Q12952	345 aa		5.74	□□□□□ -1.49
NFKB1-208	ENST00000509165	TCIRG1	Q13488	830 aa		5.74	□□□□□ -1.49
NFKB1-208	ENST00000509165	RIN1	Q13671	783 aa		5.74	□□□□□ -1.49
NFKB1-208	ENST00000509165	PDCD1	Q15116	288 aa		5.74	□□□□□ -1.49
NFKB1-208	ENST00000509165	MAMDC4	Q6UXC1	1216 aa		5.74	□□□□□ -1.49
NFKB1-208	ENST00000509165	POLN	Q7Z5Q5	900 aa		5.74	□□□□□ -1.49
NFKB1-208	ENST00000509165	PLA2G15	Q8NCC3	412 aa		5.74	□□□□□ -1.49
NFKB1-208	ENST00000509165	CLRN3	Q8NCR9	226 aa		5.74	□□□□□ -1.49
NFKB1-208	ENST00000509165	EDA	Q92838	391 aa		5.74	□□□□□ -1.49
NFKB1-208	ENST00000509165	TTC1	Q99614	292 aa		5.74	□□□□□ -1.49
NFKB1-208	ENST00000509165	FDXACB1	Q9BRP7	624 aa	Predicted RBP	5.74	□□□□□ -1.49
NFKB1-208	ENST00000509165	PRDM12	Q9H4Q4	367 aa		5.74	□□□□□ -1.49
NFKB1-208	ENST00000509165	PLA2G3	Q9NZ20	509 aa		5.74	□□□□□ -1.49
NFKB1-208	ENST00000509165	APOBEC2	Q9Y235	224 aa	Known RBP	5.74	□□□□□ -1.49
NFKB1-208	ENST00000509165	MYRF	Q9Y2G1	1151 aa		5.74	□□□□□ -1.49
NFKB1-208	ENST00000509165	TESMIN	Q9Y4I5	508 aa		5.74	□□□□□ -1.49
NFKB1-208	ENST00000509165	PCDHB6	Q9Y5E3	794 aa		5.74	□□□□□ -1.49
NFKB1-208	ENST00000509165	NUMBL	Q9Y6R0	609 aa		5.74	□□□□□ -1.49
NFKB1-208	ENST00000509165	LRRC7	Q96NW7	1537 aa		5.74	□□□□□ -1.49
NFKB1-208	ENST00000509165	SAMD9	Q5K651	1589 aa		5.73	□□□□□ -1.49
NFKB1-208	ENST00000509165	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	5.73	□□□□□ -1.49
NFKB1-208	ENST00000509165	MAFG	O15525	162 aa		5.73	□□□□□ -1.49
NFKB1-208	ENST00000509165	KDM1A	O60341	852 aa		5.73	□□□□□ -1.49
NFKB1-208	ENST00000509165	BPIFB4	P59827	614 aa		5.73	□□□□□ -1.49
NFKB1-208	ENST00000509165	GAGE13	Q4V321	117 aa		5.73	□□□□□ -1.49
NFKB1-208	ENST00000509165	CDYL2	Q8N8U2	506 aa		5.73	□□□□□ -1.49
NFKB1-208	ENST00000509165	GCDH	Q92947	438 aa	Predicted RBP	5.73	□□□□□ -1.49
NFKB1-208	ENST00000509165	FERMT2	Q96AC1	680 aa		5.73	□□□□□ -1.49
NFKB1-208	ENST00000509165	HIST1H2AH	Q96KK5	128 aa		5.73	□□□□□ -1.49
NFKB1-208	ENST00000509165	GPR20	Q99678	358 aa		5.73	□□□□□ -1.49
NFKB1-208	ENST00000509165	HIST1H2AJ	Q99878	128 aa		5.73	□□□□□ -1.49
NFKB1-208	ENST00000509165	FAM126A	Q9BYI3	521 aa	Predicted RBP	5.73	□□□□□ -1.49
NFKB1-208	ENST00000509165	ANO3	Q9BYT9	981 aa		5.73	□□□□□ -1.49
NFKB1-208	ENST00000509165	WNT8A	Q9H1J5	351 aa		5.73	□□□□□ -1.49
NFKB1-208	ENST00000509165	TOPORS	Q9NS56	1045 aa	Predicted RBP	5.73	□□□□□ -1.49
NFKB1-208	ENST00000509165	SYNPO2	Q9UMS6	1093 aa		5.73	□□□□□ -1.49
NFKB1-208	ENST00000509165	TCAF1	Q9Y4C2	921 aa		5.73	□□□□□ -1.49
NFKB1-208	ENST00000509165	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	5.73	□□□□□ -1.49
NFKB1-208	ENST00000509165	SCAPER	Q9BY12	1400 aa		5.73	□□□□□ -1.49
NFKB1-208	ENST00000509165	CFAP74	Q9C0B2	1584 aa		5.72	□□□□□ -1.49
NFKB1-208	ENST00000509165	DIP2C	Q9Y2E4	1556 aa		5.72	□□□□□ -1.49
NFKB1-208	ENST00000509165	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	5.72	□□□□□ -1.49

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