RNA–Protein interactions for RNA: ENST00000509023.5

SNCAIP-211, Transcript of synuclein alpha interacting protein, humanhuman

TSL 2

Gene SNCAIP, Length 1,972 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-211ENST00000509023 NOD1Q9Y239 953 aa16.26■□□□□ 0.19
SNCAIP-211ENST00000509023 USP20Q9Y2K6 914 aa16.26■□□□□ 0.19
SNCAIP-211ENST00000509023 ARVCFO00192 962 aa16.25■□□□□ 0.19
SNCAIP-211ENST00000509023 CSDE1O75534 798 aaKnown RBP16.25■□□□□ 0.19
SNCAIP-211ENST00000509023 EDN1P05305 212 aa16.25■□□□□ 0.19
SNCAIP-211ENST00000509023 PRKCBP05771 671 aa16.25■□□□□ 0.19
SNCAIP-211ENST00000509023 CDK11BP21127 795 aaKnown RBP16.25■□□□□ 0.19
SNCAIP-211ENST00000509023 GJA8P48165 433 aa16.25■□□□□ 0.19
SNCAIP-211ENST00000509023 MNX1P50219 401 aaPredicted RBP16.25■□□□□ 0.19
SNCAIP-211ENST00000509023 ADAM9Q13443 819 aa16.25■□□□□ 0.19
SNCAIP-211ENST00000509023 ZC3H3Q8IXZ2 948 aaKnown RBP16.25■□□□□ 0.19
SNCAIP-211ENST00000509023 OSMRQ99650 979 aa16.25■□□□□ 0.19
SNCAIP-211ENST00000509023 ANKRD63C9JTQ0 380 aa16.24■□□□□ 0.19
SNCAIP-211ENST00000509023 FGFR1OPO95684 399 aaKnown RBP16.24■□□□□ 0.19
SNCAIP-211ENST00000509023 IQCF3P0C7M6 154 aa16.24■□□□□ 0.19
SNCAIP-211ENST00000509023 RPL13P26373 211 aaKnown RBP16.24■□□□□ 0.19
SNCAIP-211ENST00000509023 LIG4P49917 911 aa16.24■□□□□ 0.19
SNCAIP-211ENST00000509023 SNRPFP62306 86 aaKnown RBP16.24■□□□□ 0.19
SNCAIP-211ENST00000509023 NFIL3Q16649 462 aa16.24■□□□□ 0.19
SNCAIP-211ENST00000509023 SLC39A4Q6P5W5 647 aa16.24■□□□□ 0.19
SNCAIP-211ENST00000509023 RSPH3Q86UC2 560 aa16.24■□□□□ 0.19
SNCAIP-211ENST00000509023 IRF2BP1Q8IU81 584 aa16.24■□□□□ 0.19
SNCAIP-211ENST00000509023 CREBRFQ8IUR6 639 aa16.24■□□□□ 0.19
SNCAIP-211ENST00000509023 CEP63Q96MT8 703 aa16.24■□□□□ 0.19
SNCAIP-211ENST00000509023 SENP6Q9GZR1 1112 aaPredicted RBP16.24■□□□□ 0.19
SNCAIP-211ENST00000509023 MCOLN1Q9GZU1 580 aa16.24■□□□□ 0.19
SNCAIP-211ENST00000509023 FZD8Q9H461 694 aa16.24■□□□□ 0.19
SNCAIP-211ENST00000509023 CDHR5Q9HBB8 845 aa16.24■□□□□ 0.19
SNCAIP-211ENST00000509023 CGNQ9P2M7 1197 aaKnown RBP16.24■□□□□ 0.19
SNCAIP-211ENST00000509023 KCNJ18B7U540 433 aa16.24■□□□□ 0.19
SNCAIP-211ENST00000509023 CETN3O15182 167 aa16.24■□□□□ 0.19
SNCAIP-211ENST00000509023 AP5Z1O43299 807 aa16.24■□□□□ 0.19
SNCAIP-211ENST00000509023 B4GALT4O60513 344 aa16.24■□□□□ 0.19
SNCAIP-211ENST00000509023 PIGRP01833 764 aa16.24■□□□□ 0.19
SNCAIP-211ENST00000509023 PTK7Q13308 1070 aa16.24■□□□□ 0.19
SNCAIP-211ENST00000509023 KCNJ12Q14500 433 aa16.24■□□□□ 0.19
SNCAIP-211ENST00000509023 ARMCX5Q6P1M9 558 aa16.24■□□□□ 0.19
SNCAIP-211ENST00000509023 SRGAP1Q7Z6B7 1085 aa16.24■□□□□ 0.19
SNCAIP-211ENST00000509023 CBWD1Q9BRT8 395 aa16.24■□□□□ 0.19
SNCAIP-211ENST00000509023 TARS2Q9BW92 718 aaKnown RBP16.24■□□□□ 0.19
SNCAIP-211ENST00000509023 MRPL4Q9BYD3 311 aaKnown RBP16.24■□□□□ 0.19
SNCAIP-211ENST00000509023 GCOM2Q9BZD3 368 aaPredicted RBP16.24■□□□□ 0.19
SNCAIP-211ENST00000509023 PRMT7Q9NVM4 692 aaPredicted RBP16.24■□□□□ 0.19
SNCAIP-211ENST00000509023 TTLL13PA6NNM8 815 aa16.23■□□□□ 0.19
SNCAIP-211ENST00000509023 M0QZ92 97 aa16.23■□□□□ 0.19
SNCAIP-211ENST00000509023 ACKR2O00590 384 aa16.23■□□□□ 0.19
SNCAIP-211ENST00000509023 RPLP2P05387 115 aaKnown RBP16.23■□□□□ 0.19
SNCAIP-211ENST00000509023 ADSSP30520 456 aa16.23■□□□□ 0.19
SNCAIP-211ENST00000509023 CYP2J2P51589 502 aa16.23■□□□□ 0.19
SNCAIP-211ENST00000509023 TCP11X2Q5H9J9 407 aa16.23■□□□□ 0.19
SNCAIP-211ENST00000509023 FAM114A1Q8IWE2 563 aa16.23■□□□□ 0.19
SNCAIP-211ENST00000509023 C12orf56Q8IXR9 622 aa16.23■□□□□ 0.19
SNCAIP-211ENST00000509023 ZNF710Q8N1W2 664 aa16.23■□□□□ 0.19
SNCAIP-211ENST00000509023 CNOT6LQ96LI5 555 aaKnown RBP16.23■□□□□ 0.19
SNCAIP-211ENST00000509023 SEZ6LQ9BYH1 1024 aa16.23■□□□□ 0.19
SNCAIP-211ENST00000509023 TRPV6Q9H1D0 765 aa16.23■□□□□ 0.19
SNCAIP-211ENST00000509023 PCIF1Q9H4Z3 704 aa16.23■□□□□ 0.19
SNCAIP-211ENST00000509023 MAGEC2Q9UBF1 373 aaPredicted RBP16.23■□□□□ 0.19
SNCAIP-211ENST00000509023 B4GALT5O43286 388 aa16.22■□□□□ 0.19
SNCAIP-211ENST00000509023 THPOP40225 353 aa16.22■□□□□ 0.19
SNCAIP-211ENST00000509023 CDK7P50613 346 aa16.22■□□□□ 0.19
SNCAIP-211ENST00000509023 MRPS6P82932 125 aaKnown RBP16.22■□□□□ 0.19
SNCAIP-211ENST00000509023 SPAG1Q07617 926 aa16.22■□□□□ 0.19
SNCAIP-211ENST00000509023 PRPF4BQ13523 1007 aaKnown RBP16.22■□□□□ 0.19
SNCAIP-211ENST00000509023 FAM187BQ17R55 369 aa16.22■□□□□ 0.19
SNCAIP-211ENST00000509023 CEP135Q66GS9 1140 aa16.22■□□□□ 0.19
SNCAIP-211ENST00000509023 FILIP1Q7Z7B0 1213 aa16.22■□□□□ 0.19
SNCAIP-211ENST00000509023 RPAINQ86UA6 219 aa16.22■□□□□ 0.19
SNCAIP-211ENST00000509023 SLC9A9Q8IVB4 645 aa16.22■□□□□ 0.19
SNCAIP-211ENST00000509023 DIS3LQ8TF46 1054 aaKnown RBP16.22■□□□□ 0.19
SNCAIP-211ENST00000509023 DHX38Q92620 1227 aaKnown RBP16.22■□□□□ 0.19
SNCAIP-211ENST00000509023 DMAC2Q9NW81 257 aa16.22■□□□□ 0.19
SNCAIP-211ENST00000509023 CDY2AQ9Y6F7 541 aa16.22■□□□□ 0.19
SNCAIP-211ENST00000509023 SERPINC1P01008 464 aa16.22■□□□□ 0.19
SNCAIP-211ENST00000509023 CTSHP09668 335 aa16.22■□□□□ 0.19
SNCAIP-211ENST00000509023 DARSP14868 501 aaKnown RBP16.22■□□□□ 0.19
SNCAIP-211ENST00000509023 EEF1GP26641 437 aaKnown RBP16.22■□□□□ 0.19
SNCAIP-211ENST00000509023 CRYBB1P53674 252 aaPredicted RBP16.22■□□□□ 0.19
SNCAIP-211ENST00000509023 FANCCQ00597 558 aa16.22■□□□□ 0.19
SNCAIP-211ENST00000509023 MYBPC2Q14324 1141 aa16.22■□□□□ 0.19
SNCAIP-211ENST00000509023 AMHR2Q16671 573 aa16.22■□□□□ 0.19
SNCAIP-211ENST00000509023 SARM1Q6SZW1 724 aa16.22■□□□□ 0.19
SNCAIP-211ENST00000509023 ZPBP2Q6X784 338 aa16.22■□□□□ 0.19
SNCAIP-211ENST00000509023 TMEM40Q8WWA1 233 aa16.22■□□□□ 0.19
SNCAIP-211ENST00000509023 POMGNT1Q8WZA1 660 aa16.22■□□□□ 0.19
SNCAIP-211ENST00000509023 PRIMPOLQ96LW4 560 aa16.22■□□□□ 0.19
SNCAIP-211ENST00000509023 TMEM106CQ9BVX2 250 aa16.22■□□□□ 0.19
SNCAIP-211ENST00000509023 CELF4Q9BZC1 486 aaKnown RBP16.22■□□□□ 0.19
SNCAIP-211ENST00000509023 HSPBP1Q9NZL4 362 aa16.22■□□□□ 0.19
SNCAIP-211ENST00000509023 ANKFY1Q9P2R3 1169 aa16.22■□□□□ 0.19
SNCAIP-211ENST00000509023 TRPV2Q9Y5S1 764 aa16.22■□□□□ 0.19
SNCAIP-211ENST00000509023 AKAP3O75969 853 aa16.21■□□□□ 0.19
SNCAIP-211ENST00000509023 ERLIN2O94905 339 aa16.21■□□□□ 0.19
SNCAIP-211ENST00000509023 FGFR4P22455 802 aa16.21■□□□□ 0.19
SNCAIP-211ENST00000509023 EIF4BP23588 611 aaKnown RBP16.21■□□□□ 0.19
SNCAIP-211ENST00000509023 CASP4P49662 377 aa16.21■□□□□ 0.19
SNCAIP-211ENST00000509023 ATN1P54259 1190 aaPredicted RBP16.21■□□□□ 0.19
SNCAIP-211ENST00000509023 SNX17Q15036 470 aa16.21■□□□□ 0.19
SNCAIP-211ENST00000509023 TMEM132AQ24JP5 1023 aa16.21■□□□□ 0.19
SNCAIP-211ENST00000509023 CCDC40Q4G0X9 1142 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms