RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 AFF1P51825 1210 aaKnown RBP13.93□□□□□ -0.18
PDPN-208ENST00000509009 RNASELQ05823 741 aaKnown RBP13.93□□□□□ -0.18
PDPN-208ENST00000509009 POU5F1BQ06416 359 aa13.93□□□□□ -0.18
PDPN-208ENST00000509009 MXD4Q14582 209 aaPredicted RBP13.93□□□□□ -0.18
PDPN-208ENST00000509009 DDX53Q86TM3 631 aaKnown RBP13.93□□□□□ -0.18
PDPN-208ENST00000509009 RPGRIP1Q96KN7 1286 aa13.93□□□□□ -0.18
PDPN-208ENST00000509009 MTRQ99707 1265 aa13.93□□□□□ -0.18
PDPN-208ENST00000509009 DNAJB4Q9UDY4 337 aa13.93□□□□□ -0.18
PDPN-208ENST00000509009 MUC6Q6W4X9 2439 aa13.93□□□□□ -0.18
PDPN-208ENST00000509009 B4GALT3O60512 393 aa13.92□□□□□ -0.18
PDPN-208ENST00000509009 DGAT1O75907 488 aa13.92□□□□□ -0.18
PDPN-208ENST00000509009 DDHD2O94830 711 aa13.92□□□□□ -0.18
PDPN-208ENST00000509009 ALDH2P05091 517 aa13.92□□□□□ -0.18
PDPN-208ENST00000509009 SPATA31C1P0DKV0 1188 aa13.92□□□□□ -0.18
PDPN-208ENST00000509009 SRGAP2BP0DMP2 458 aa13.92□□□□□ -0.18
PDPN-208ENST00000509009 NCLP19338 710 aaKnown RBP13.92□□□□□ -0.18
PDPN-208ENST00000509009 SLC11A1P49279 550 aa13.92□□□□□ -0.18
PDPN-208ENST00000509009 GUCY1B3Q02153 619 aa13.92□□□□□ -0.18
PDPN-208ENST00000509009 BMS1Q14692 1282 aaKnown RBP13.92□□□□□ -0.18
PDPN-208ENST00000509009 PCBP1Q15365 356 aaKnown RBP eCLIP13.92□□□□□ -0.18
PDPN-208ENST00000509009 IFNLR1Q8IU57 520 aaPredicted RBP13.92□□□□□ -0.18
PDPN-208ENST00000509009 SMG8Q8ND04 991 aaKnown RBP13.92□□□□□ -0.18
PDPN-208ENST00000509009 ASAP3Q8TDY4 903 aa13.92□□□□□ -0.18
PDPN-208ENST00000509009 PIGOQ8TEQ8 1089 aa13.92□□□□□ -0.18
PDPN-208ENST00000509009 BCL7CQ8WUZ0 217 aaPredicted RBP13.92□□□□□ -0.18
PDPN-208ENST00000509009 AUTS2Q8WXX7 1259 aa13.92□□□□□ -0.18
PDPN-208ENST00000509009 EDAQ92838 391 aa13.92□□□□□ -0.18
PDPN-208ENST00000509009 CASP10Q92851 521 aa13.92□□□□□ -0.18
PDPN-208ENST00000509009 APOL5Q9BWW9 433 aa13.92□□□□□ -0.18
PDPN-208ENST00000509009 GBP3Q9H0R5 595 aa13.92□□□□□ -0.18
PDPN-208ENST00000509009 ZBP1Q9H171 429 aa13.92□□□□□ -0.18
PDPN-208ENST00000509009 RNF39Q9H2S5 420 aa13.92□□□□□ -0.18
PDPN-208ENST00000509009 KANSL3Q9P2N6 904 aa13.92□□□□□ -0.18
PDPN-208ENST00000509009 IRAK3Q9Y616 596 aa13.92□□□□□ -0.18
PDPN-208ENST00000509009 CTSAP10619 480 aa13.91□□□□□ -0.18
PDPN-208ENST00000509009 GLRA2P23416 452 aa13.91□□□□□ -0.18
PDPN-208ENST00000509009 AXLP30530 894 aa13.91□□□□□ -0.18
PDPN-208ENST00000509009 MCM7P33993 719 aa13.91□□□□□ -0.18
PDPN-208ENST00000509009 RARRES1P49788 294 aa13.91□□□□□ -0.18
PDPN-208ENST00000509009 SAFBQ15424 915 aaKnown RBP eCLIP13.91□□□□□ -0.18
PDPN-208ENST00000509009 CCDC83Q8IWF9 413 aa13.91□□□□□ -0.18
PDPN-208ENST00000509009 CNNM3Q8NE01 707 aa13.91□□□□□ -0.18
PDPN-208ENST00000509009 URGCPQ8TCY9 931 aa13.91□□□□□ -0.18
PDPN-208ENST00000509009 LLPHQ9BRT6 129 aaKnown RBP13.91□□□□□ -0.18
PDPN-208ENST00000509009 VN1R3Q9BXE9 311 aa13.91□□□□□ -0.18
PDPN-208ENST00000509009 RSAD1Q9HA92 442 aa13.91□□□□□ -0.18
PDPN-208ENST00000509009 HCFC2Q9Y5Z7 792 aa13.91□□□□□ -0.18
PDPN-208ENST00000509009 CNTNAP2Q9UHC6 1331 aa13.9□□□□□ -0.18
PDPN-208ENST00000509009 PIEZO1Q92508 2521 aa13.9□□□□□ -0.18
PDPN-208ENST00000509009 POTEMA6NI47 508 aa13.9□□□□□ -0.18
PDPN-208ENST00000509009 INO80B-WBP1J3KQ70 363 aa13.9□□□□□ -0.18
PDPN-208ENST00000509009 TSPAN1O60635 241 aa13.9□□□□□ -0.18
PDPN-208ENST00000509009 ERLIN2O94905 339 aa13.9□□□□□ -0.18
PDPN-208ENST00000509009 POMCP01189 267 aa13.9□□□□□ -0.18
PDPN-208ENST00000509009 ITGA4P13612 1032 aa13.9□□□□□ -0.18
PDPN-208ENST00000509009 NCBP1Q09161 790 aaKnown RBP13.9□□□□□ -0.18
PDPN-208ENST00000509009 CAPSQ13938 189 aa13.9□□□□□ -0.18
PDPN-208ENST00000509009 TFDP1Q14186 410 aa13.9□□□□□ -0.18
PDPN-208ENST00000509009 ZNF174Q15697 407 aa13.9□□□□□ -0.18
PDPN-208ENST00000509009 AMHR2Q16671 573 aa13.9□□□□□ -0.18
PDPN-208ENST00000509009 TPRNQ4KMQ1 711 aa13.9□□□□□ -0.18
PDPN-208ENST00000509009 HFE2Q6ZVN8 426 aa13.9□□□□□ -0.18
PDPN-208ENST00000509009 CATSPER3Q86XQ3 398 aa13.9□□□□□ -0.18
PDPN-208ENST00000509009 FBXO18Q8NFZ0 1043 aa13.9□□□□□ -0.18
PDPN-208ENST00000509009 SLC22A17Q8WUG5 538 aa13.9□□□□□ -0.18
PDPN-208ENST00000509009 CPB2Q96IY4 423 aa13.9□□□□□ -0.18
PDPN-208ENST00000509009 C8orf76Q96K31 380 aa13.9□□□□□ -0.18
PDPN-208ENST00000509009 ZSCAN31Q96LW9 406 aaPredicted RBP13.9□□□□□ -0.18
PDPN-208ENST00000509009 KIF2CQ99661 725 aa13.9□□□□□ -0.18
PDPN-208ENST00000509009 EIF2AQ9BY44 585 aaKnown RBP13.9□□□□□ -0.18
PDPN-208ENST00000509009 CSRNP2Q9H175 543 aa13.9□□□□□ -0.18
PDPN-208ENST00000509009 ADAM7Q9H2U9 754 aa13.9□□□□□ -0.18
PDPN-208ENST00000509009 UBN1Q9NPG3 1134 aa13.9□□□□□ -0.18
PDPN-208ENST00000509009 FAN1Q9Y2M0 1017 aa13.9□□□□□ -0.18
PDPN-208ENST00000509009 IPPQ9Y573 584 aa13.9□□□□□ -0.18
PDPN-208ENST00000509009 TECTAO75443 2155 aa13.89□□□□□ -0.19
PDPN-208ENST00000509009 NRP1O14786 923 aa13.89□□□□□ -0.19
PDPN-208ENST00000509009 INPPL1O15357 1258 aa13.89□□□□□ -0.19
PDPN-208ENST00000509009 LILRB3O75022 631 aa13.89□□□□□ -0.19
PDPN-208ENST00000509009 MED24O75448 989 aa13.89□□□□□ -0.19
PDPN-208ENST00000509009 CA8P35219 290 aa13.89□□□□□ -0.19
PDPN-208ENST00000509009 ZXDAP98168 799 aa13.89□□□□□ -0.19
PDPN-208ENST00000509009 MBTD1Q05BQ5 628 aa13.89□□□□□ -0.19
PDPN-208ENST00000509009 GIT2Q14161 759 aa13.89□□□□□ -0.19
PDPN-208ENST00000509009 NOTUMQ6P988 496 aa13.89□□□□□ -0.19
PDPN-208ENST00000509009 TRIM67Q6ZTA4 783 aa13.89□□□□□ -0.19
PDPN-208ENST00000509009 TMEM87AQ8NBN3 555 aa13.89□□□□□ -0.19
PDPN-208ENST00000509009 CCDC51Q96ER9 411 aa13.89□□□□□ -0.19
PDPN-208ENST00000509009 FAM193BQ96PV7 902 aaPredicted RBP13.89□□□□□ -0.19
PDPN-208ENST00000509009 NACC1Q96RE7 527 aa13.89□□□□□ -0.19
PDPN-208ENST00000509009 GAD1Q99259 594 aa13.89□□□□□ -0.19
PDPN-208ENST00000509009 TMEM175Q9BSA9 504 aa13.89□□□□□ -0.19
PDPN-208ENST00000509009 POLR3CQ9BUI4 534 aaPredicted RBP13.89□□□□□ -0.19
PDPN-208ENST00000509009 NFKBIZQ9BYH8 718 aa13.89□□□□□ -0.19
PDPN-208ENST00000509009 FOXP1Q9H334 677 aaPredicted RBP13.89□□□□□ -0.19
PDPN-208ENST00000509009 TUFT1Q9NNX1 390 aa13.89□□□□□ -0.19
PDPN-208ENST00000509009 MIOSQ9NXC5 875 aa13.89□□□□□ -0.19
PDPN-208ENST00000509009 CDH22Q9UJ99 828 aa13.89□□□□□ -0.19
PDPN-208ENST00000509009 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.88□□□□□ -0.19
PDPN-208ENST00000509009 ARL5CA6NH57 179 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms