RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 DCAF17Q5H9S7 520 aaPredicted RBP3.42□□□□□ -1.86
DEPDC1B-204ENST00000509006 SP5Q6BEB4 398 aaPredicted RBP3.42□□□□□ -1.86
DEPDC1B-204ENST00000509006 UNQ6494/PRO21346Q6UXR6 183 aa3.42□□□□□ -1.86
DEPDC1B-204ENST00000509006 APBB1IPQ7Z5R6 666 aaPredicted RBP3.42□□□□□ -1.86
DEPDC1B-204ENST00000509006 FAM177A1Q8N128 213 aaPredicted RBP3.42□□□□□ -1.86
DEPDC1B-204ENST00000509006 ST8SIA2Q92186 375 aa3.42□□□□□ -1.86
DEPDC1B-204ENST00000509006 TUBGCP5Q96RT8 1024 aa3.42□□□□□ -1.86
DEPDC1B-204ENST00000509006 ELF4Q99607 663 aaPredicted RBP3.42□□□□□ -1.86
DEPDC1B-204ENST00000509006 OSBPL6Q9BZF3 934 aa3.42□□□□□ -1.86
DEPDC1B-204ENST00000509006 PCIF1Q9H4Z3 704 aa3.42□□□□□ -1.86
DEPDC1B-204ENST00000509006 RSAD1Q9HA92 442 aa3.42□□□□□ -1.86
DEPDC1B-204ENST00000509006 TNPO3Q9Y5L0 923 aaKnown RBP3.42□□□□□ -1.86
DEPDC1B-204ENST00000509006 H7C1D1 291 aa3.41□□□□□ -1.86
DEPDC1B-204ENST00000509006 DAPK3O43293 454 aa3.41□□□□□ -1.86
DEPDC1B-204ENST00000509006 OPHN1O60890 802 aa3.41□□□□□ -1.86
DEPDC1B-204ENST00000509006 PPFIA4O75335 1185 aa3.41□□□□□ -1.86
DEPDC1B-204ENST00000509006 PRPF6O94906 941 aaKnown RBP3.41□□□□□ -1.86
DEPDC1B-204ENST00000509006 SCAF4O95104 1147 aaKnown RBP3.41□□□□□ -1.86
DEPDC1B-204ENST00000509006 CFBP00751 764 aa3.41□□□□□ -1.86
DEPDC1B-204ENST00000509006 GAAP10253 952 aa3.41□□□□□ -1.86
DEPDC1B-204ENST00000509006 TYRP1P17643 537 aa3.41□□□□□ -1.86
DEPDC1B-204ENST00000509006 SLC9A1P19634 815 aa3.41□□□□□ -1.86
DEPDC1B-204ENST00000509006 ZEB1P37275 1124 aaPredicted RBP3.41□□□□□ -1.86
DEPDC1B-204ENST00000509006 PTH2RP49190 550 aa3.41□□□□□ -1.86
DEPDC1B-204ENST00000509006 FAM189BP81408 668 aa3.41□□□□□ -1.86
DEPDC1B-204ENST00000509006 ADCY2Q08462 1091 aa3.41□□□□□ -1.86
DEPDC1B-204ENST00000509006 ADCY1Q08828 1119 aa3.41□□□□□ -1.86
DEPDC1B-204ENST00000509006 KRT40Q6A162 431 aa3.41□□□□□ -1.86
DEPDC1B-204ENST00000509006 FBXO42Q6P3S6 717 aa3.41□□□□□ -1.86
DEPDC1B-204ENST00000509006 UBXN4Q92575 508 aa3.41□□□□□ -1.86
DEPDC1B-204ENST00000509006 RPGRQ92834 1020 aaKnown RBP3.41□□□□□ -1.86
DEPDC1B-204ENST00000509006 ARL8AQ96BM9 186 aa3.41□□□□□ -1.86
DEPDC1B-204ENST00000509006 ORAI3Q9BRQ5 295 aa3.41□□□□□ -1.86
DEPDC1B-204ENST00000509006 MTG2Q9H4K7 406 aa3.41□□□□□ -1.86
DEPDC1B-204ENST00000509006 ANKFY1Q9P2R3 1169 aa3.41□□□□□ -1.86
DEPDC1B-204ENST00000509006 NCDNQ9UBB6 729 aa3.41□□□□□ -1.86
DEPDC1B-204ENST00000509006 ZNF185O15231 689 aa3.4□□□□□ -1.87
DEPDC1B-204ENST00000509006 LAG3P18627 525 aa3.4□□□□□ -1.87
DEPDC1B-204ENST00000509006 GNAT2P19087 354 aa3.4□□□□□ -1.87
DEPDC1B-204ENST00000509006 NPEPPSP55786 919 aa3.4□□□□□ -1.87
DEPDC1B-204ENST00000509006 SQSTM1Q13501 440 aa3.4□□□□□ -1.87
DEPDC1B-204ENST00000509006 ZNF174Q15697 407 aa3.4□□□□□ -1.87
DEPDC1B-204ENST00000509006 FAM214AQ32MH5 1076 aa3.4□□□□□ -1.87
DEPDC1B-204ENST00000509006 METTL24Q5JXM2 366 aa3.4□□□□□ -1.87
DEPDC1B-204ENST00000509006 PIK3R6Q5UE93 754 aa3.4□□□□□ -1.87
DEPDC1B-204ENST00000509006 KIAA1841Q6NSI8 718 aa3.4□□□□□ -1.87
DEPDC1B-204ENST00000509006 PHYKPLQ8IUZ5 450 aa3.4□□□□□ -1.87
DEPDC1B-204ENST00000509006 PIK3C3Q8NEB9 887 aa3.4□□□□□ -1.87
DEPDC1B-204ENST00000509006 SUPT20HQ8NEM7 779 aa3.4□□□□□ -1.87
DEPDC1B-204ENST00000509006 OR52N2Q8NGI0 321 aa3.4□□□□□ -1.87
DEPDC1B-204ENST00000509006 PDCD2LQ9BRP1 358 aa3.4□□□□□ -1.87
DEPDC1B-204ENST00000509006 MYL10Q9BUA6 226 aa3.4□□□□□ -1.87
DEPDC1B-204ENST00000509006 POFUT1Q9H488 388 aa3.4□□□□□ -1.87
DEPDC1B-204ENST00000509006 SERHL2Q9H4I8 314 aa3.4□□□□□ -1.87
DEPDC1B-204ENST00000509006 ZMAT4Q9H898 229 aa3.4□□□□□ -1.87
DEPDC1B-204ENST00000509006 CABP5Q9NP86 173 aa3.4□□□□□ -1.87
DEPDC1B-204ENST00000509006 TESQ9UGI8 421 aaKnown RBP3.4□□□□□ -1.87
DEPDC1B-204ENST00000509006 SPO11Q9Y5K1 396 aa3.4□□□□□ -1.87
DEPDC1B-204ENST00000509006 AHRRA9YTQ3 701 aa3.39□□□□□ -1.87
DEPDC1B-204ENST00000509006 ELL2O00472 640 aaPredicted RBP3.39□□□□□ -1.87
DEPDC1B-204ENST00000509006 TRIM24O15164 1050 aa3.39□□□□□ -1.87
DEPDC1B-204ENST00000509006 HOXA3O43365 443 aaPredicted RBP3.39□□□□□ -1.87
DEPDC1B-204ENST00000509006 OPA1O60313 960 aa3.39□□□□□ -1.87
DEPDC1B-204ENST00000509006 GYPEP15421 78 aa3.39□□□□□ -1.87
DEPDC1B-204ENST00000509006 SDSP20132 328 aa3.39□□□□□ -1.87
DEPDC1B-204ENST00000509006 USP14P54578 494 aa3.39□□□□□ -1.87
DEPDC1B-204ENST00000509006 KRTAP10-7P60409 375 aaPredicted RBP3.39□□□□□ -1.87
DEPDC1B-204ENST00000509006 LCE1AQ5T7P2 110 aa3.39□□□□□ -1.87
DEPDC1B-204ENST00000509006 ANKRD13AQ8IZ07 590 aa3.39□□□□□ -1.87
DEPDC1B-204ENST00000509006 UNC5BQ8IZJ1 945 aa3.39□□□□□ -1.87
DEPDC1B-204ENST00000509006 C7orf31Q8N865 590 aa3.39□□□□□ -1.87
DEPDC1B-204ENST00000509006 RTF1Q92541 710 aaKnown RBP3.39□□□□□ -1.87
DEPDC1B-204ENST00000509006 FAM193BQ96PV7 902 aaPredicted RBP3.39□□□□□ -1.87
DEPDC1B-204ENST00000509006 UIMC1Q96RL1 719 aa3.39□□□□□ -1.87
DEPDC1B-204ENST00000509006 LSM14BQ9BX40 385 aaKnown RBP3.39□□□□□ -1.87
DEPDC1B-204ENST00000509006 CPEB1Q9BZB8 566 aaKnown RBP3.39□□□□□ -1.87
DEPDC1B-204ENST00000509006 WDR11Q9BZH6 1224 aa3.39□□□□□ -1.87
DEPDC1B-204ENST00000509006 KANSL2Q9H9L4 492 aa3.39□□□□□ -1.87
DEPDC1B-204ENST00000509006 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.39□□□□□ -1.87
DEPDC1B-204ENST00000509006 OXSMQ9NWU1 459 aa3.39□□□□□ -1.87
DEPDC1B-204ENST00000509006 ING3Q9NXR8 418 aa3.39□□□□□ -1.87
DEPDC1B-204ENST00000509006 SYNPO2Q9UMS6 1093 aa3.39□□□□□ -1.87
DEPDC1B-204ENST00000509006 FRMD4BQ9Y2L6 1034 aa3.39□□□□□ -1.87
DEPDC1B-204ENST00000509006 FAM83GA6ND36 823 aa3.38□□□□□ -1.87
DEPDC1B-204ENST00000509006 RECQL4O94761 1208 aa3.38□□□□□ -1.87
DEPDC1B-204ENST00000509006 SEC24DO94855 1032 aaPredicted RBP3.38□□□□□ -1.87
DEPDC1B-204ENST00000509006 FSBPO95073 299 aa3.38□□□□□ -1.87
DEPDC1B-204ENST00000509006 JMJD7P0C870 316 aa3.38□□□□□ -1.87
DEPDC1B-204ENST00000509006 ATP2A2P16615 1042 aaKnown RBP3.38□□□□□ -1.87
DEPDC1B-204ENST00000509006 CD69Q07108 199 aa3.38□□□□□ -1.87
DEPDC1B-204ENST00000509006 MAN2A1Q16706 1144 aa3.38□□□□□ -1.87
DEPDC1B-204ENST00000509006 SOGA3Q5TF21 947 aa3.38□□□□□ -1.87
DEPDC1B-204ENST00000509006 CDCA2Q69YH5 1023 aaPredicted RBP3.38□□□□□ -1.87
DEPDC1B-204ENST00000509006 KRTAP5-11Q6L8G4 156 aa3.38□□□□□ -1.87
DEPDC1B-204ENST00000509006 CCDC62Q6P9F0 684 aa3.38□□□□□ -1.87
DEPDC1B-204ENST00000509006 CMTR2Q8IYT2 770 aaKnown RBP3.38□□□□□ -1.87
DEPDC1B-204ENST00000509006 BOLLQ8N9W6 283 aaKnown RBP3.38□□□□□ -1.87
DEPDC1B-204ENST00000509006 MYEOVQ96EZ4 313 aa3.38□□□□□ -1.87
DEPDC1B-204ENST00000509006 HIST1H2AHQ96KK5 128 aa3.38□□□□□ -1.87
DEPDC1B-204ENST00000509006 HIST1H2AJQ99878 128 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms