RNA–Protein interactions for RNA: ENST00000508841.1

GYPB-210, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 5

Gene GYPB, Length 610 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-210ENST00000508841 GAGE13Q4V321 117 aa7.82□□□□□ -1.16
GYPB-210ENST00000508841 C19orf54Q5BKX5 351 aa7.82□□□□□ -1.16
GYPB-210ENST00000508841 TAS1R1Q7RTX1 841 aa7.82□□□□□ -1.16
GYPB-210ENST00000508841 PLA2G15Q8NCC3 412 aa7.82□□□□□ -1.16
GYPB-210ENST00000508841 GLB1L3Q8NCI6 653 aaPredicted RBP7.82□□□□□ -1.16
GYPB-210ENST00000508841 RHOBTB2Q9BYZ6 727 aa7.82□□□□□ -1.16
GYPB-210ENST00000508841 RBM12Q9NTZ6 932 aaKnown RBP7.82□□□□□ -1.16
GYPB-210ENST00000508841 USP40Q9NVE5 1235 aa7.82□□□□□ -1.16
GYPB-210ENST00000508841 RPTORQ8N122 1335 aa7.81□□□□□ -1.16
GYPB-210ENST00000508841 PMS2P1A4D2B8 440 aa7.81□□□□□ -1.16
GYPB-210ENST00000508841 FAM171A2A8MVW0 826 aa7.81□□□□□ -1.16
GYPB-210ENST00000508841 ARHGAP6O43182 974 aa7.81□□□□□ -1.16
GYPB-210ENST00000508841 TSPAN6O43657 245 aa7.81□□□□□ -1.16
GYPB-210ENST00000508841 SASH1O94885 1247 aa7.81□□□□□ -1.16
GYPB-210ENST00000508841 IL33O95760 270 aa7.81□□□□□ -1.16
GYPB-210ENST00000508841 C5AR1P21730 350 aa7.81□□□□□ -1.16
GYPB-210ENST00000508841 CYP2C19P33261 490 aa7.81□□□□□ -1.16
GYPB-210ENST00000508841 WASP42768 502 aa7.81□□□□□ -1.16
GYPB-210ENST00000508841 CD69Q07108 199 aa7.81□□□□□ -1.16
GYPB-210ENST00000508841 ADAM15Q13444 863 aa7.81□□□□□ -1.16
GYPB-210ENST00000508841 ODF1Q14990 250 aa7.81□□□□□ -1.16
GYPB-210ENST00000508841 CXorf57Q6NSI4 855 aaKnown RBP7.81□□□□□ -1.16
GYPB-210ENST00000508841 GPR155Q7Z3F1 870 aa7.81□□□□□ -1.16
GYPB-210ENST00000508841 THEMISQ8N1K5 641 aaPredicted RBP7.81□□□□□ -1.16
GYPB-210ENST00000508841 JPH3Q8WXH2 748 aaPredicted RBP7.81□□□□□ -1.16
GYPB-210ENST00000508841 KIAA1683Q9H0B3 1180 aa7.81□□□□□ -1.16
GYPB-210ENST00000508841 SLC6A15Q9H2J7 730 aa7.81□□□□□ -1.16
GYPB-210ENST00000508841 CHPF2Q9P2E5 772 aa7.81□□□□□ -1.16
GYPB-210ENST00000508841 SCOCQ9UIL1 159 aa7.81□□□□□ -1.16
GYPB-210ENST00000508841 NRP1O14786 923 aa7.8□□□□□ -1.16
GYPB-210ENST00000508841 DTNBO60941 627 aa7.8□□□□□ -1.16
GYPB-210ENST00000508841 PARNO95453 639 aaKnown RBP7.8□□□□□ -1.16
GYPB-210ENST00000508841 SCGB1D2O95969 90 aa7.8□□□□□ -1.16
GYPB-210ENST00000508841 JUNP05412 331 aaKnown RBP7.8□□□□□ -1.16
GYPB-210ENST00000508841 PF4V1P10720 104 aa7.8□□□□□ -1.16
GYPB-210ENST00000508841 HNRNPLP14866 589 aaKnown RBP eCLIP7.8□□□□□ -1.161e-6■■■□□ 17.3
GYPB-210ENST00000508841 MCAMP43121 646 aa7.8□□□□□ -1.16
GYPB-210ENST00000508841 HSP90AB2PQ58FF8 381 aa7.8□□□□□ -1.16
GYPB-210ENST00000508841 NT5DC1Q5TFE4 455 aa7.8□□□□□ -1.16
GYPB-210ENST00000508841 NXNQ6DKJ4 435 aa7.8□□□□□ -1.16
GYPB-210ENST00000508841 C1QL4Q86Z23 238 aa7.8□□□□□ -1.16
GYPB-210ENST00000508841 GPR156Q8NFN8 814 aa7.8□□□□□ -1.16
GYPB-210ENST00000508841 RELTQ969Z4 430 aa7.8□□□□□ -1.16
GYPB-210ENST00000508841 RTFDC1Q9BY42 306 aaPredicted RBP7.8□□□□□ -1.16
GYPB-210ENST00000508841 NR2E1Q9Y466 385 aa7.8□□□□□ -1.16
GYPB-210ENST00000508841 MARCH6O60337 910 aa7.79□□□□□ -1.16
GYPB-210ENST00000508841 KIR2DL3P43628 341 aa7.79□□□□□ -1.16
GYPB-210ENST00000508841 CCT2P78371 535 aaKnown RBP7.79□□□□□ -1.16
GYPB-210ENST00000508841 TCIRG1Q13488 830 aa7.79□□□□□ -1.16
GYPB-210ENST00000508841 GTF2H3Q13889 308 aa7.79□□□□□ -1.16
GYPB-210ENST00000508841 FAM102BQ5T8I3 360 aa7.79□□□□□ -1.16
GYPB-210ENST00000508841 FMNL3Q8IVF7 1028 aa7.79□□□□□ -1.16
GYPB-210ENST00000508841 RAVER1Q8IY67 606 aaKnown RBP7.79□□□□□ -1.16
GYPB-210ENST00000508841 TCEAL8Q8IYN2 117 aa7.79□□□□□ -1.16
GYPB-210ENST00000508841 SNX33Q8WV41 574 aa7.79□□□□□ -1.16
GYPB-210ENST00000508841 CCDC136Q96JN2 1154 aa7.79□□□□□ -1.16
GYPB-210ENST00000508841 AIFM3Q96NN9 605 aa7.79□□□□□ -1.16
GYPB-210ENST00000508841 SEC61A2Q9H9S3 476 aa7.79□□□□□ -1.16
GYPB-210ENST00000508841 RBM8AQ9Y5S9 174 aaKnown RBP7.79□□□□□ -1.16
GYPB-210ENST00000508841 GOLGA6CA6NDK9 693 aa7.78□□□□□ -1.16
GYPB-210ENST00000508841 GOLGA6BA6NDN3 693 aa7.78□□□□□ -1.16
GYPB-210ENST00000508841 PRAMEF4O60810 478 aa7.78□□□□□ -1.16
GYPB-210ENST00000508841 TMEM127O75204 238 aa7.78□□□□□ -1.16
GYPB-210ENST00000508841 ALDH1A2O94788 518 aa7.78□□□□□ -1.16
GYPB-210ENST00000508841 ENDOD1O94919 500 aa7.78□□□□□ -1.16
GYPB-210ENST00000508841 ZRANB2O95218 330 aaKnown RBP eCLIP7.78□□□□□ -1.16
GYPB-210ENST00000508841 RPLP2P05387 115 aaKnown RBP7.78□□□□□ -1.16
GYPB-210ENST00000508841 GOLGA6DP0CG33 693 aa7.78□□□□□ -1.16
GYPB-210ENST00000508841 VSIG10L2P0DP72 767 aa7.78□□□□□ -1.16
GYPB-210ENST00000508841 ZSCAN22P10073 491 aaPredicted RBP7.78□□□□□ -1.16
GYPB-210ENST00000508841 CTSSP25774 331 aa7.78□□□□□ -1.16
GYPB-210ENST00000508841 KIF23Q02241 960 aaPredicted RBP7.78□□□□□ -1.16
GYPB-210ENST00000508841 MGAT2Q10469 447 aa7.78□□□□□ -1.16
GYPB-210ENST00000508841 CCDC181Q5TID7 509 aa7.78□□□□□ -1.16
GYPB-210ENST00000508841 ARHGEF18Q6ZSZ5 1173 aa7.78□□□□□ -1.16
GYPB-210ENST00000508841 MIGA2Q7L4E1 593 aa7.78□□□□□ -1.16
GYPB-210ENST00000508841 MARCH10Q8NA82 808 aaPredicted RBP7.78□□□□□ -1.16
GYPB-210ENST00000508841 PIK3C3Q8NEB9 887 aa7.78□□□□□ -1.16
GYPB-210ENST00000508841 RIN2Q8WYP3 895 aaPredicted RBP7.78□□□□□ -1.16
GYPB-210ENST00000508841 SLC2A13Q96QE2 648 aa7.78□□□□□ -1.16
GYPB-210ENST00000508841 GOLGA6AQ9NYA3 693 aa7.78□□□□□ -1.16
GYPB-210ENST00000508841 PUF60Q9UHX1 559 aaKnown RBP7.78□□□□□ -1.16
GYPB-210ENST00000508841 TUBD1Q9UJT1 453 aa7.78□□□□□ -1.16
GYPB-210ENST00000508841 C2orf78A6NCI8 922 aa7.77□□□□□ -1.17
GYPB-210ENST00000508841 B4GALT3O60512 393 aa7.77□□□□□ -1.17
GYPB-210ENST00000508841 B4GALT4O60513 344 aa7.77□□□□□ -1.17
GYPB-210ENST00000508841 GASTP01350 101 aa7.77□□□□□ -1.17
GYPB-210ENST00000508841 BUD31P41223 144 aaPredicted RBP7.77□□□□□ -1.17
GYPB-210ENST00000508841 RAC3P60763 192 aa7.77□□□□□ -1.17
GYPB-210ENST00000508841 RRP12Q5JTH9 1297 aaKnown RBP7.77□□□□□ -1.17
GYPB-210ENST00000508841 KRT40Q6A162 431 aa7.77□□□□□ -1.17
GYPB-210ENST00000508841 PPP4R3AQ6IN85 833 aa7.77□□□□□ -1.17
GYPB-210ENST00000508841 LCNL1Q6ZST4 164 aa7.77□□□□□ -1.17
GYPB-210ENST00000508841 MYO1HQ8N1T3 1032 aa7.77□□□□□ -1.17
GYPB-210ENST00000508841 PPM1NQ8N819 430 aa7.77□□□□□ -1.17
GYPB-210ENST00000508841 ZNF480Q8WV37 535 aa7.77□□□□□ -1.17
GYPB-210ENST00000508841 RABGGTAQ92696 567 aa7.77□□□□□ -1.17
GYPB-210ENST00000508841 HDAC10Q969S8 669 aa7.77□□□□□ -1.17
GYPB-210ENST00000508841 COA7Q96BR5 231 aa7.77□□□□□ -1.17
GYPB-210ENST00000508841 KRTAP9-3Q9BYQ3 159 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms