RNA–Protein interactions for RNA: ENST00000508838.5

AFP-204, Transcript of alpha fetoprotein, humanhuman

TSL 2

Gene AFP, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-204ENST00000508838 ATG2BQ96BY7 2078 aa6.26□□□□□ -1.41
AFP-204ENST00000508838 IGSF10Q6WRI0 2623 aa6.26□□□□□ -1.41
AFP-204ENST00000508838 DDX39AO00148 427 aaKnown RBP6.26□□□□□ -1.41
AFP-204ENST00000508838 LILRB3O75022 631 aa6.26□□□□□ -1.41
AFP-204ENST00000508838 LRRN2O75325 713 aa6.26□□□□□ -1.41
AFP-204ENST00000508838 CSDE1O75534 798 aaKnown RBP6.26□□□□□ -1.41
AFP-204ENST00000508838 STAG3L1P0CL83 205 aa6.26□□□□□ -1.41
AFP-204ENST00000508838 SMARCA1P28370 1054 aa6.26□□□□□ -1.41
AFP-204ENST00000508838 ID4P47928 161 aa6.26□□□□□ -1.41
AFP-204ENST00000508838 STAT5BP51692 787 aa6.26□□□□□ -1.41
AFP-204ENST00000508838 CLCN5P51795 746 aa6.26□□□□□ -1.41
AFP-204ENST00000508838 CEP55Q53EZ4 464 aa6.26□□□□□ -1.41
AFP-204ENST00000508838 IER5Q5VY09 327 aa6.26□□□□□ -1.41
AFP-204ENST00000508838 B3GNT9Q6UX72 402 aa6.26□□□□□ -1.41
AFP-204ENST00000508838 RSPH3Q86UC2 560 aa6.26□□□□□ -1.41
AFP-204ENST00000508838 NLRX1Q86UT6 975 aa6.26□□□□□ -1.41
AFP-204ENST00000508838 LRRC71Q8N4P6 559 aa6.26□□□□□ -1.41
AFP-204ENST00000508838 DCLK2Q8N568 766 aa6.26□□□□□ -1.41
AFP-204ENST00000508838 TDRD5Q8NAT2 981 aaKnown RBP6.26□□□□□ -1.41
AFP-204ENST00000508838 SUMF1Q8NBK3 374 aa6.26□□□□□ -1.41
AFP-204ENST00000508838 GIMAP8Q8ND71 665 aaPredicted RBP6.26□□□□□ -1.41
AFP-204ENST00000508838 LPPQ93052 612 aa6.26□□□□□ -1.41
AFP-204ENST00000508838 NKD2Q969F2 451 aaPredicted RBP6.26□□□□□ -1.41
AFP-204ENST00000508838 GJA10Q969M2 543 aa6.26□□□□□ -1.41
AFP-204ENST00000508838 PPP2R3CQ969Q6 453 aa6.26□□□□□ -1.41
AFP-204ENST00000508838 ZNF558Q96NG5 402 aa6.26□□□□□ -1.41
AFP-204ENST00000508838 MYADMQ96S97 322 aa6.26□□□□□ -1.41
AFP-204ENST00000508838 LSG1Q9H089 658 aaKnown RBP6.26□□□□□ -1.41
AFP-204ENST00000508838 ENTPD7Q9NQZ7 604 aa6.26□□□□□ -1.41
AFP-204ENST00000508838 C1orf112Q9NSG2 853 aa6.26□□□□□ -1.41
AFP-204ENST00000508838 DLL3Q9NYJ7 618 aa6.26□□□□□ -1.41
AFP-204ENST00000508838 GINS2Q9Y248 185 aa6.26□□□□□ -1.41
AFP-204ENST00000508838 MAFBQ9Y5Q3 323 aaPredicted RBP6.26□□□□□ -1.41
AFP-204ENST00000508838 RBM8AQ9Y5S9 174 aaKnown RBP6.26□□□□□ -1.41
AFP-204ENST00000508838 IRAK3Q9Y616 596 aa6.26□□□□□ -1.41
AFP-204ENST00000508838 HELZP42694 1942 aaKnown RBP6.25□□□□□ -1.41
AFP-204ENST00000508838 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.25□□□□□ -1.41
AFP-204ENST00000508838 RNF223E7ERA6 249 aa6.25□□□□□ -1.41
AFP-204ENST00000508838 PRC1O43663 620 aa6.25□□□□□ -1.41
AFP-204ENST00000508838 CTSAP10619 480 aa6.25□□□□□ -1.41
AFP-204ENST00000508838 HOXB8P17481 243 aaPredicted RBP6.25□□□□□ -1.41
AFP-204ENST00000508838 TGM1P22735 817 aa6.25□□□□□ -1.41
AFP-204ENST00000508838 FECHP22830 423 aa6.25□□□□□ -1.41
AFP-204ENST00000508838 SLC11A1P49279 550 aa6.25□□□□□ -1.41
AFP-204ENST00000508838 METAP2P50579 478 aaKnown RBP eCLIP6.25□□□□□ -1.41
AFP-204ENST00000508838 GPC3P51654 580 aa6.25□□□□□ -1.41
AFP-204ENST00000508838 CLCN4P51793 760 aa6.25□□□□□ -1.41
AFP-204ENST00000508838 CRYBB1P53674 252 aaPredicted RBP6.25□□□□□ -1.41
AFP-204ENST00000508838 BCAR1P56945 870 aa6.25□□□□□ -1.41
AFP-204ENST00000508838 ITIH3Q06033 890 aa6.25□□□□□ -1.41
AFP-204ENST00000508838 SMC1AQ14683 1233 aaKnown RBP6.25□□□□□ -1.41
AFP-204ENST00000508838 TARBP2Q15633 366 aaKnown RBP6.25□□□□□ -1.41
AFP-204ENST00000508838 MCTP2Q6DN12 878 aa6.25□□□□□ -1.41
AFP-204ENST00000508838 PDE12Q6L8Q7 609 aaKnown RBP6.25□□□□□ -1.41
AFP-204ENST00000508838 APOA5Q6Q788 366 aa6.25□□□□□ -1.41
AFP-204ENST00000508838 TMC5Q6UXY8 1006 aa6.25□□□□□ -1.41
AFP-204ENST00000508838 GPR149Q86SP6 731 aa6.25□□□□□ -1.41
AFP-204ENST00000508838 SKAP1Q86WV1 359 aa6.25□□□□□ -1.41
AFP-204ENST00000508838 ZNF280BQ86YH2 543 aa6.25□□□□□ -1.41
AFP-204ENST00000508838 DTWD2Q8NBA8 298 aa6.25□□□□□ -1.41
AFP-204ENST00000508838 ST13P5Q8NFI4 369 aaPredicted RBP6.25□□□□□ -1.41
AFP-204ENST00000508838 CASP10Q92851 521 aa6.25□□□□□ -1.41
AFP-204ENST00000508838 MAP4K1Q92918 833 aa6.25□□□□□ -1.41
AFP-204ENST00000508838 RRP36Q96EU6 259 aaKnown RBP6.25□□□□□ -1.41
AFP-204ENST00000508838 CDHR1Q96JP9 859 aa6.25□□□□□ -1.41
AFP-204ENST00000508838 TCEANC2Q96MN5 208 aa6.25□□□□□ -1.41
AFP-204ENST00000508838 CNTNAP3BQ96NU0 1288 aa6.25□□□□□ -1.41
AFP-204ENST00000508838 NECTIN4Q96NY8 510 aa6.25□□□□□ -1.41
AFP-204ENST00000508838 REPIN1Q9BWE0 567 aaKnown RBP6.25□□□□□ -1.41
AFP-204ENST00000508838 CNTNAP3Q9BZ76 1288 aa6.25□□□□□ -1.41
AFP-204ENST00000508838 NRDE2Q9H7Z3 1164 aa6.25□□□□□ -1.41
AFP-204ENST00000508838 PSTPIP2Q9H939 334 aa6.25□□□□□ -1.41
AFP-204ENST00000508838 NGRNQ9NPE2 291 aaKnown RBP6.25□□□□□ -1.41
AFP-204ENST00000508838 RIC8AQ9NPQ8 531 aa6.25□□□□□ -1.41
AFP-204ENST00000508838 TBC1D13Q9NVG8 400 aa6.25□□□□□ -1.41
AFP-204ENST00000508838 LIMD1Q9UGP4 676 aa6.25□□□□□ -1.41
AFP-204ENST00000508838 BRPF3Q9ULD4 1205 aa6.25□□□□□ -1.41
AFP-204ENST00000508838 PCDHB7Q9Y5E2 793 aa6.25□□□□□ -1.41
AFP-204ENST00000508838 PCDHB12Q9Y5F1 795 aa6.25□□□□□ -1.41
AFP-204ENST00000508838 BPTFQ12830 3046 aa6.25□□□□□ -1.41
AFP-204ENST00000508838 NCANO14594 1321 aa6.25□□□□□ -1.41
AFP-204ENST00000508838 MYH11P35749 1972 aa6.24□□□□□ -1.41
AFP-204ENST00000508838 A0A0U1RQF3 1178 aa6.24□□□□□ -1.41
AFP-204ENST00000508838 FSD2A1L4K1 749 aa6.24□□□□□ -1.41
AFP-204ENST00000508838 DENND3A2RUS2 1198 aa6.24□□□□□ -1.41
AFP-204ENST00000508838 HBP1O60381 514 aa6.24□□□□□ -1.41
AFP-204ENST00000508838 DDHD2O94830 711 aa6.24□□□□□ -1.41
AFP-204ENST00000508838 IGHA1P01876 353 aa6.24□□□□□ -1.41
AFP-204ENST00000508838 RPLP2P05387 115 aaKnown RBP6.24□□□□□ -1.41
AFP-204ENST00000508838 CNPP09543 421 aaKnown RBP6.24□□□□□ -1.41
AFP-204ENST00000508838 DARSP14868 501 aaKnown RBP6.24□□□□□ -1.41
AFP-204ENST00000508838 CDC27P30260 824 aa6.24□□□□□ -1.41
AFP-204ENST00000508838 PPM1AP35813 382 aa6.24□□□□□ -1.41
AFP-204ENST00000508838 PRKCEQ02156 737 aa6.24□□□□□ -1.41
AFP-204ENST00000508838 TMEM259Q4ZIN3 620 aa6.24□□□□□ -1.41
AFP-204ENST00000508838 UBXN11Q5T124 520 aa6.24□□□□□ -1.41
AFP-204ENST00000508838 NIPA1Q7RTP0 329 aa6.24□□□□□ -1.41
AFP-204ENST00000508838 HEATR3Q7Z4Q2 680 aa6.24□□□□□ -1.41
AFP-204ENST00000508838 SGMS1Q86VZ5 419 aa6.24□□□□□ -1.41
AFP-204ENST00000508838 MICU3Q86XE3 530 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms