RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 TCERG1LQ5VWI1 586 aa11.96□□□□□ -0.5
SH3RF1-203ENST00000508685 NCAPG2Q86XI2 1143 aa11.96□□□□□ -0.5
SH3RF1-203ENST00000508685 IQCKQ8N0W5 287 aa11.96□□□□□ -0.5
SH3RF1-203ENST00000508685 PROCA1Q8NCQ7 364 aaPredicted RBP11.96□□□□□ -0.5
SH3RF1-203ENST00000508685 CHST13Q8NET6 341 aa11.96□□□□□ -0.5
SH3RF1-203ENST00000508685 OPTNQ96CV9 577 aa11.96□□□□□ -0.5
SH3RF1-203ENST00000508685 CALR3Q96L12 384 aaKnown RBP11.96□□□□□ -0.5
SH3RF1-203ENST00000508685 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.96□□□□□ -0.5
SH3RF1-203ENST00000508685 STRA6Q9BX79 667 aa11.96□□□□□ -0.5
SH3RF1-203ENST00000508685 SPATC1LQ9H0A9 340 aa11.96□□□□□ -0.5
SH3RF1-203ENST00000508685 AGPAT3Q9NRZ7 376 aa11.96□□□□□ -0.5
SH3RF1-203ENST00000508685 GABBR1Q9UBS5 961 aa11.96□□□□□ -0.5
SH3RF1-203ENST00000508685 INTUQ9ULD6 942 aa11.96□□□□□ -0.5
SH3RF1-203ENST00000508685 TISP43B9A030 160 aa11.95□□□□□ -0.5
SH3RF1-203ENST00000508685 NCK2O43639 380 aa11.95□□□□□ -0.5
SH3RF1-203ENST00000508685 ZEB2O60315 1214 aa11.95□□□□□ -0.5
SH3RF1-203ENST00000508685 HEXIM1O94992 359 aaKnown RBP11.95□□□□□ -0.5
SH3RF1-203ENST00000508685 CPP00450 1065 aa11.95□□□□□ -0.5
SH3RF1-203ENST00000508685 PRKCIP41743 596 aa11.95□□□□□ -0.5
SH3RF1-203ENST00000508685 CYP2J2P51589 502 aa11.95□□□□□ -0.5
SH3RF1-203ENST00000508685 SLC7A5Q01650 507 aa11.95□□□□□ -0.5
SH3RF1-203ENST00000508685 CUL1Q13616 776 aa11.95□□□□□ -0.5
SH3RF1-203ENST00000508685 RPS6KA1Q15418 735 aa11.95□□□□□ -0.5
SH3RF1-203ENST00000508685 XKR9Q5GH70 373 aa11.95□□□□□ -0.5
SH3RF1-203ENST00000508685 CCDC60Q8IWA6 550 aaPredicted RBP11.95□□□□□ -0.5
SH3RF1-203ENST00000508685 ANKRD13CQ8N6S4 541 aa11.95□□□□□ -0.5
SH3RF1-203ENST00000508685 SLC35C1Q96A29 364 aa11.95□□□□□ -0.5
SH3RF1-203ENST00000508685 GANQ9H2C0 597 aa11.95□□□□□ -0.5
SH3RF1-203ENST00000508685 TXNRD2Q9NNW7 524 aa11.95□□□□□ -0.5
SH3RF1-203ENST00000508685 LARSQ9P2J5 1176 aaKnown RBP11.95□□□□□ -0.5
SH3RF1-203ENST00000508685 SLC9A2Q9UBY0 812 aa11.95□□□□□ -0.5
SH3RF1-203ENST00000508685 DAAM1Q9Y4D1 1078 aa11.95□□□□□ -0.5
SH3RF1-203ENST00000508685 ATXN2Q99700 1313 aaKnown RBP11.95□□□□□ -0.5
SH3RF1-203ENST00000508685 A0A0A6YYK5 440 aaPredicted RBP11.94□□□□□ -0.5
SH3RF1-203ENST00000508685 GTPBP10A4D1E9 387 aaKnown RBP11.94□□□□□ -0.5
SH3RF1-203ENST00000508685 SPATA31C2B4DYI2 1134 aa11.94□□□□□ -0.5
SH3RF1-203ENST00000508685 CCDC188H7C350 402 aa11.94□□□□□ -0.5
SH3RF1-203ENST00000508685 TRIM66O15016 1216 aa11.94□□□□□ -0.5
SH3RF1-203ENST00000508685 SLC16A3O15427 465 aaKnown RBP11.94□□□□□ -0.5
SH3RF1-203ENST00000508685 ITGBL1O95965 494 aaPredicted RBP11.94□□□□□ -0.5
SH3RF1-203ENST00000508685 AFPP02771 609 aaKnown RBP11.94□□□□□ -0.5
SH3RF1-203ENST00000508685 ACTN1P12814 892 aa11.94□□□□□ -0.5
SH3RF1-203ENST00000508685 KLRC1P26715 233 aa11.94□□□□□ -0.5
SH3RF1-203ENST00000508685 APLP1P51693 650 aa11.94□□□□□ -0.5
SH3RF1-203ENST00000508685 SOX10P56693 466 aa11.94□□□□□ -0.5
SH3RF1-203ENST00000508685 ACTR2P61160 394 aa11.94□□□□□ -0.5
SH3RF1-203ENST00000508685 GNPTABQ3T906 1256 aa11.94□□□□□ -0.5
SH3RF1-203ENST00000508685 SWSAP1Q6NVH7 229 aa11.94□□□□□ -0.5
SH3RF1-203ENST00000508685 FOXR1Q6PIV2 292 aa11.94□□□□□ -0.5
SH3RF1-203ENST00000508685 LRIG3Q6UXM1 1119 aa11.94□□□□□ -0.5
SH3RF1-203ENST00000508685 HS2ST1Q7LGA3 356 aa11.94□□□□□ -0.5
SH3RF1-203ENST00000508685 RIOX2Q8IUF8 465 aa11.94□□□□□ -0.5
SH3RF1-203ENST00000508685 SYCE1Q8N0S2 351 aa11.94□□□□□ -0.5
SH3RF1-203ENST00000508685 USP38Q8NB14 1042 aa11.94□□□□□ -0.5
SH3RF1-203ENST00000508685 ACTRT1Q8TDG2 376 aa11.94□□□□□ -0.5
SH3RF1-203ENST00000508685 SPAG5Q96R06 1193 aa11.94□□□□□ -0.5
SH3RF1-203ENST00000508685 SENP7Q9BQF6 1050 aa11.94□□□□□ -0.5
SH3RF1-203ENST00000508685 EPB41L5Q9HCM4 733 aa11.94□□□□□ -0.5
SH3RF1-203ENST00000508685 TMEM59LQ9UK28 342 aa11.94□□□□□ -0.5
SH3RF1-203ENST00000508685 AGTPBP1Q9UPW5 1226 aa11.94□□□□□ -0.5
SH3RF1-203ENST00000508685 PFASO15067 1338 aa11.94□□□□□ -0.5
SH3RF1-203ENST00000508685 UBE4BO95155 1302 aa11.94□□□□□ -0.5
SH3RF1-203ENST00000508685 A0A087X0T9 212 aa11.94□□□□□ -0.5
SH3RF1-203ENST00000508685 HMGB1P1B2RPK0 211 aaPredicted RBP11.94□□□□□ -0.5
SH3RF1-203ENST00000508685 CNMDO75829 334 aa11.94□□□□□ -0.5
SH3RF1-203ENST00000508685 FAM228BP0C875 321 aa11.94□□□□□ -0.5
SH3RF1-203ENST00000508685 PLS3P13797 630 aa11.94□□□□□ -0.5
SH3RF1-203ENST00000508685 SLC9A1P19634 815 aa11.94□□□□□ -0.5
SH3RF1-203ENST00000508685 ALDH5A1P51649 535 aaPredicted RBP11.94□□□□□ -0.5
SH3RF1-203ENST00000508685 GNGT1P63211 74 aa11.94□□□□□ -0.5
SH3RF1-203ENST00000508685 MOGSQ13724 837 aa11.94□□□□□ -0.5
SH3RF1-203ENST00000508685 STXBP2Q15833 593 aa11.94□□□□□ -0.5
SH3RF1-203ENST00000508685 TTC31Q49AM3 519 aaPredicted RBP11.94□□□□□ -0.5
SH3RF1-203ENST00000508685 FAM102BQ5T8I3 360 aa11.94□□□□□ -0.5
SH3RF1-203ENST00000508685 KDM7AQ6ZMT4 941 aa11.94□□□□□ -0.5
SH3RF1-203ENST00000508685 SEPT14Q6ZU15 432 aa11.94□□□□□ -0.5
SH3RF1-203ENST00000508685 STXBP4Q6ZWJ1 553 aa11.94□□□□□ -0.5
SH3RF1-203ENST00000508685 CYFIP1Q7L576 1253 aa11.94□□□□□ -0.5
SH3RF1-203ENST00000508685 FAM186BQ8IYM0 893 aa11.94□□□□□ -0.5
SH3RF1-203ENST00000508685 SYCP3Q8IZU3 236 aa11.94□□□□□ -0.5
SH3RF1-203ENST00000508685 ARFGAP2Q8N6H7 521 aa11.94□□□□□ -0.5
SH3RF1-203ENST00000508685 DNERQ8NFT8 737 aa11.94□□□□□ -0.5
SH3RF1-203ENST00000508685 BCAS4Q8TDM0 211 aa11.94□□□□□ -0.5
SH3RF1-203ENST00000508685 BORCS6Q96GS4 357 aa11.94□□□□□ -0.5
SH3RF1-203ENST00000508685 CDHR1Q96JP9 859 aa11.94□□□□□ -0.5
SH3RF1-203ENST00000508685 ZIM3Q96PE6 472 aa11.94□□□□□ -0.5
SH3RF1-203ENST00000508685 KIFC3Q9BVG8 833 aa11.94□□□□□ -0.5
SH3RF1-203ENST00000508685 ISCUQ9H1K1 167 aa11.94□□□□□ -0.5
SH3RF1-203ENST00000508685 ADAMTS1Q9UHI8 967 aa11.94□□□□□ -0.5
SH3RF1-203ENST00000508685 KCNH4Q9UQ05 1017 aa11.94□□□□□ -0.5
SH3RF1-203ENST00000508685 CXCL11O14625 94 aa11.93□□□□□ -0.5
SH3RF1-203ENST00000508685 STAM2O75886 525 aa11.93□□□□□ -0.5
SH3RF1-203ENST00000508685 GLI1P08151 1106 aa11.93□□□□□ -0.5
SH3RF1-203ENST00000508685 PEX3P56589 373 aa11.93□□□□□ -0.5
SH3RF1-203ENST00000508685 GUCY2DQ02846 1103 aa11.93□□□□□ -0.5
SH3RF1-203ENST00000508685 PPIL2Q13356 520 aa11.93□□□□□ -0.5
SH3RF1-203ENST00000508685 CLUL1Q15846 466 aa11.93□□□□□ -0.5
SH3RF1-203ENST00000508685 MICALCLQ6ZW33 695 aa11.93□□□□□ -0.5
SH3RF1-203ENST00000508685 TSEN2Q8NCE0 465 aaKnown RBP11.93□□□□□ -0.5
SH3RF1-203ENST00000508685 RDM1Q8NG50 284 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms