RNA–Protein interactions for RNA: ENST00000508659.5

CLDND1-219, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 681 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-219ENST00000508659 CSPP1Q1MSJ5 1256 aa18.72■□□□□ 0.59
CLDND1-219ENST00000508659 NAALADL2Q58DX5 795 aa18.72■□□□□ 0.59
CLDND1-219ENST00000508659 UBXN11Q5T124 520 aa18.72■□□□□ 0.59
CLDND1-219ENST00000508659 PPP4R3CPQ6ZMV5 832 aa18.72■□□□□ 0.59
CLDND1-219ENST00000508659 C1orf186Q6ZWK4 172 aa18.72■□□□□ 0.59
CLDND1-219ENST00000508659 SYT2Q8N9I0 419 aaPredicted RBP18.72■□□□□ 0.59
CLDND1-219ENST00000508659 CNNM3Q8NE01 707 aa18.72■□□□□ 0.59
CLDND1-219ENST00000508659 LMAN2LQ9H0V9 348 aa18.72■□□□□ 0.59
CLDND1-219ENST00000508659 INPP5FQ9Y2H2 1132 aa18.72■□□□□ 0.59
CLDND1-219ENST00000508659 SRPRBQ9Y5M8 271 aaKnown RBP18.72■□□□□ 0.59
CLDND1-219ENST00000508659 CCDC169A6NNP5 214 aa18.71■□□□□ 0.59
CLDND1-219ENST00000508659 GRM6O15303 877 aa18.71■□□□□ 0.59
CLDND1-219ENST00000508659 PRKCBP05771 671 aa18.71■□□□□ 0.59
CLDND1-219ENST00000508659 EFNA5P52803 228 aa18.71■□□□□ 0.59
CLDND1-219ENST00000508659 SLC12A3P55017 1021 aa18.71■□□□□ 0.59
CLDND1-219ENST00000508659 RAD51AP2Q09MP3 1159 aa18.71■□□□□ 0.59
CLDND1-219ENST00000508659 PRPF4BQ13523 1007 aaKnown RBP18.71■□□□□ 0.59
CLDND1-219ENST00000508659 SPECC1Q5M775 1068 aa18.71■□□□□ 0.59
CLDND1-219ENST00000508659 SLC27A1Q6PCB7 646 aa18.71■□□□□ 0.59
CLDND1-219ENST00000508659 THNSL1Q8IYQ7 743 aa18.71■□□□□ 0.59
CLDND1-219ENST00000508659 HACE1Q8IYU2 909 aa18.71■□□□□ 0.59
CLDND1-219ENST00000508659 KRI1Q8N9T8 703 aaKnown RBP18.71■□□□□ 0.59
CLDND1-219ENST00000508659 KLHL23Q8NBE8 558 aa18.71■□□□□ 0.59
CLDND1-219ENST00000508659 COLGALT1Q8NBJ5 622 aa18.71■□□□□ 0.59
CLDND1-219ENST00000508659 URGCPQ8TCY9 931 aa18.71■□□□□ 0.59
CLDND1-219ENST00000508659 SYMPKQ92797 1274 aaKnown RBP18.71■□□□□ 0.59
CLDND1-219ENST00000508659 EIF2AQ9BY44 585 aaKnown RBP18.71■□□□□ 0.59
CLDND1-219ENST00000508659 RSAD1Q9HA92 442 aa18.71■□□□□ 0.59
CLDND1-219ENST00000508659 C17orf75Q9HAS0 396 aa18.71■□□□□ 0.59
CLDND1-219ENST00000508659 POLD4Q9HCU8 107 aa18.71■□□□□ 0.59
CLDND1-219ENST00000508659 THEGQ9P2T0 379 aa18.71■□□□□ 0.59
CLDND1-219ENST00000508659 IPPQ9Y573 584 aa18.71■□□□□ 0.59
CLDND1-219ENST00000508659 MORC2Q9Y6X9 1032 aaPredicted RBP18.71■□□□□ 0.59
CLDND1-219ENST00000508659 PHLPP2Q6ZVD8 1323 aa18.71■□□□□ 0.59
CLDND1-219ENST00000508659 KIAA1671Q9BY89 1806 aa18.7■□□□□ 0.58
CLDND1-219ENST00000508659 MEIS3P2A8K0S8 358 aa18.7■□□□□ 0.58
CLDND1-219ENST00000508659 NCLP19338 710 aaKnown RBP18.7■□□□□ 0.58
CLDND1-219ENST00000508659 PPM1AP35813 382 aa18.7■□□□□ 0.58
CLDND1-219ENST00000508659 PEX3P56589 373 aa18.7■□□□□ 0.58
CLDND1-219ENST00000508659 SLC39A14Q15043 492 aa18.7■□□□□ 0.58
CLDND1-219ENST00000508659 FAM187BQ17R55 369 aa18.7■□□□□ 0.58
CLDND1-219ENST00000508659 FNDC1Q4ZHG4 1894 aaPredicted RBP18.7■□□□□ 0.58
CLDND1-219ENST00000508659 DAW1Q8N136 415 aa18.7■□□□□ 0.58
CLDND1-219ENST00000508659 CLIC6Q96NY7 704 aa18.7■□□□□ 0.58
CLDND1-219ENST00000508659 CCSER1Q9C0I3 900 aa18.7■□□□□ 0.58
CLDND1-219ENST00000508659 CCDC113Q9H0I3 377 aa18.7■□□□□ 0.58
CLDND1-219ENST00000508659 FZD8Q9H461 694 aa18.7■□□□□ 0.58
CLDND1-219ENST00000508659 CWH43Q9H720 699 aa18.7■□□□□ 0.58
CLDND1-219ENST00000508659 ALG13Q9NP73 1137 aaKnown RBP18.7■□□□□ 0.58
CLDND1-219ENST00000508659 CCDC39Q9UFE4 941 aa18.7■□□□□ 0.58
CLDND1-219ENST00000508659 PLAGL2Q9UPG8 496 aa18.7■□□□□ 0.58
CLDND1-219ENST00000508659 SPTBN5Q9NRC6 3674 aaKnown RBP18.7■□□□□ 0.58
CLDND1-219ENST00000508659 TRANK1O15050 2925 aa18.7■□□□□ 0.58
CLDND1-219ENST00000508659 A0A1B0GUA9 196 aa18.69■□□□□ 0.58
CLDND1-219ENST00000508659 N4BP3O15049 544 aa18.69■□□□□ 0.58
CLDND1-219ENST00000508659 NPTXRO95502 500 aa18.69■□□□□ 0.58
CLDND1-219ENST00000508659 ITGB1P05556 798 aa18.69■□□□□ 0.58
CLDND1-219ENST00000508659 ITGA4P13612 1032 aa18.69■□□□□ 0.58
CLDND1-219ENST00000508659 NPTX2P47972 431 aa18.69■□□□□ 0.58
CLDND1-219ENST00000508659 RNASELQ05823 741 aaKnown RBP18.69■□□□□ 0.58
CLDND1-219ENST00000508659 MAPK7Q13164 816 aa18.69■□□□□ 0.58
CLDND1-219ENST00000508659 PKP1Q13835 747 aa18.69■□□□□ 0.58
CLDND1-219ENST00000508659 BECN1Q14457 450 aa18.69■□□□□ 0.58
CLDND1-219ENST00000508659 NOMO2Q5JPE7 1267 aa18.69■□□□□ 0.58
CLDND1-219ENST00000508659 LRRC55Q6ZSA7 311 aa18.69■□□□□ 0.58
CLDND1-219ENST00000508659 MRPL10Q7Z7H8 261 aaKnown RBP18.69■□□□□ 0.58
CLDND1-219ENST00000508659 GPBP1Q86WP2 473 aa18.69■□□□□ 0.58
CLDND1-219ENST00000508659 SMG8Q8ND04 991 aaKnown RBP18.69■□□□□ 0.58
CLDND1-219ENST00000508659 LARP4BQ92615 738 aaKnown RBP18.69■□□□□ 0.58
CLDND1-219ENST00000508659 RAD54LQ92698 747 aa18.69■□□□□ 0.58
CLDND1-219ENST00000508659 EPSTI1Q96J88 318 aa18.69■□□□□ 0.58
CLDND1-219ENST00000508659 ZNF558Q96NG5 402 aa18.69■□□□□ 0.58
CLDND1-219ENST00000508659 ADPGKQ9BRR6 497 aa18.69■□□□□ 0.58
CLDND1-219ENST00000508659 NXF3Q9H4D5 531 aaKnown RBP18.69■□□□□ 0.58
CLDND1-219ENST00000508659 NSUN3Q9H649 340 aaKnown RBP18.69■□□□□ 0.58
CLDND1-219ENST00000508659 UBN1Q9NPG3 1134 aa18.69■□□□□ 0.58
CLDND1-219ENST00000508659 KMT5AQ9NQR1 393 aa18.69■□□□□ 0.58
CLDND1-219ENST00000508659 PRDM6Q9NQX0 595 aa18.69■□□□□ 0.58
CLDND1-219ENST00000508659 ACKR2O00590 384 aa18.68■□□□□ 0.58
CLDND1-219ENST00000508659 ZC3H11AO75152 810 aaKnown RBP eCLIP18.68■□□□□ 0.58
CLDND1-219ENST00000508659 FGF18O76093 207 aa18.68■□□□□ 0.58
CLDND1-219ENST00000508659 KRT18P05783 430 aaKnown RBP18.68■□□□□ 0.58
CLDND1-219ENST00000508659 DHX8Q14562 1220 aaKnown RBP18.68■□□□□ 0.58
CLDND1-219ENST00000508659 FOXD4L6Q3SYB3 417 aaPredicted RBP18.68■□□□□ 0.58
CLDND1-219ENST00000508659 KCNT2Q6UVM3 1135 aa18.68■□□□□ 0.58
CLDND1-219ENST00000508659 FOXD4L3Q6VB84 417 aaPredicted RBP18.68■□□□□ 0.58
CLDND1-219ENST00000508659 AGMOQ6ZNB7 445 aa18.68■□□□□ 0.58
CLDND1-219ENST00000508659 CDR2LQ86X02 465 aaPredicted RBP18.68■□□□□ 0.58
CLDND1-219ENST00000508659 LINC00301Q8NCQ3 95 aa18.68■□□□□ 0.58
CLDND1-219ENST00000508659 POF1BQ8WVV4 589 aa18.68■□□□□ 0.58
CLDND1-219ENST00000508659 APOL6Q9BWW8 343 aa18.68■□□□□ 0.58
CLDND1-219ENST00000508659 PDZD7Q9H5P4 517 aa18.68■□□□□ 0.58
CLDND1-219ENST00000508659 TBC1D13Q9NVG8 400 aa18.68■□□□□ 0.58
CLDND1-219ENST00000508659 ODF2LQ9ULJ1 636 aa18.68■□□□□ 0.58
CLDND1-219ENST00000508659 HES2Q9Y543 173 aa18.68■□□□□ 0.58
CLDND1-219ENST00000508659 SPTLC2O15270 562 aa18.67■□□□□ 0.58
CLDND1-219ENST00000508659 OFD1O75665 1012 aa18.67■□□□□ 0.58
CLDND1-219ENST00000508659 YEATS4O95619 227 aa18.67■□□□□ 0.58
CLDND1-219ENST00000508659 PLS3P13797 630 aa18.67■□□□□ 0.58
CLDND1-219ENST00000508659 PBX3P40426 434 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms