RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 FRAT1Q92837 279 aaPredicted RBP5.68□□□□□ -1.5
PDLIM5-211ENST00000508531 NKD2Q969F2 451 aaPredicted RBP5.68□□□□□ -1.5
PDLIM5-211ENST00000508531 CLIP3Q96DZ5 547 aa5.68□□□□□ -1.5
PDLIM5-211ENST00000508531 PCIF1Q9H4Z3 704 aa5.68□□□□□ -1.5
PDLIM5-211ENST00000508531 ACSS2Q9NR19 701 aa5.68□□□□□ -1.5
PDLIM5-211ENST00000508531 TCOF1Q13428 1488 aaKnown RBP5.68□□□□□ -1.5
PDLIM5-211ENST00000508531 CPS1P31327 1500 aa5.68□□□□□ -1.5
PDLIM5-211ENST00000508531 MAP3K1Q13233 1512 aa5.68□□□□□ -1.5
PDLIM5-211ENST00000508531 CCDC144AA2RUR9 1427 aa5.67□□□□□ -1.5
PDLIM5-211ENST00000508531 A0A087X1B8 175 aa5.67□□□□□ -1.5
PDLIM5-211ENST00000508531 PTPDC1A2A3K4 754 aa5.67□□□□□ -1.5
PDLIM5-211ENST00000508531 GOLGA6L3A6NEY3 463 aa5.67□□□□□ -1.5
PDLIM5-211ENST00000508531 B4E1Z4 1266 aa5.67□□□□□ -1.5
PDLIM5-211ENST00000508531 TRAF5O00463 557 aa5.67□□□□□ -1.5
PDLIM5-211ENST00000508531 OPA1O60313 960 aa5.67□□□□□ -1.5
PDLIM5-211ENST00000508531 PTMSP20962 102 aa5.67□□□□□ -1.5
PDLIM5-211ENST00000508531 CANXP27824 592 aaKnown RBP5.67□□□□□ -1.5
PDLIM5-211ENST00000508531 INHBCP55103 352 aa5.67□□□□□ -1.5
PDLIM5-211ENST00000508531 ZNF460Q14592 562 aa5.67□□□□□ -1.5
PDLIM5-211ENST00000508531 TTC38Q5R3I4 469 aa5.67□□□□□ -1.5
PDLIM5-211ENST00000508531 UTP14CQ5TAP6 766 aaKnown RBP5.67□□□□□ -1.5
PDLIM5-211ENST00000508531 MEX3CQ5U5Q3 659 aaKnown RBP5.67□□□□□ -1.5
PDLIM5-211ENST00000508531 GGT6Q6P531 493 aa5.67□□□□□ -1.5
PDLIM5-211ENST00000508531 LDLRAD3Q86YD5 345 aa5.67□□□□□ -1.5
PDLIM5-211ENST00000508531 KIAA1958Q8N8K9 716 aa5.67□□□□□ -1.5
PDLIM5-211ENST00000508531 MIEF2Q96C03 454 aa5.67□□□□□ -1.5
PDLIM5-211ENST00000508531 TUBGCP5Q96RT8 1024 aa5.67□□□□□ -1.5
PDLIM5-211ENST00000508531 POLR3BQ9NW08 1133 aaPredicted RBP5.67□□□□□ -1.5
PDLIM5-211ENST00000508531 DNAI1Q9UI46 699 aa5.67□□□□□ -1.5
PDLIM5-211ENST00000508531 TNPO3Q9Y5L0 923 aaKnown RBP5.67□□□□□ -1.5
PDLIM5-211ENST00000508531 SETD5Q9C0A6 1442 aa5.66□□□□□ -1.5
PDLIM5-211ENST00000508531 PLA2R1Q13018 1463 aa5.66□□□□□ -1.5
PDLIM5-211ENST00000508531 UBE2QL1A1L167 161 aa5.66□□□□□ -1.5
PDLIM5-211ENST00000508531 H7C1D1 291 aa5.66□□□□□ -1.5
PDLIM5-211ENST00000508531 ASLP04424 464 aa5.66□□□□□ -1.5
PDLIM5-211ENST00000508531 PTX3P26022 381 aaPredicted RBP5.66□□□□□ -1.5
PDLIM5-211ENST00000508531 INHBEP58166 350 aa5.66□□□□□ -1.5
PDLIM5-211ENST00000508531 ZNF174Q15697 407 aa5.66□□□□□ -1.5
PDLIM5-211ENST00000508531 ELAVL1Q15717 326 aaKnown RBP5.66□□□□□ -1.5
PDLIM5-211ENST00000508531 SMN1Q16637 294 aaKnown RBP5.66□□□□□ -1.5
PDLIM5-211ENST00000508531 FAM111BQ6SJ93 734 aa5.66□□□□□ -1.5
PDLIM5-211ENST00000508531 ZNF627Q7L945 461 aa5.66□□□□□ -1.5
PDLIM5-211ENST00000508531 PLA2G15Q8NCC3 412 aa5.66□□□□□ -1.5
PDLIM5-211ENST00000508531 DYDC2Q96IM9 177 aa5.66□□□□□ -1.5
PDLIM5-211ENST00000508531 DNAJC2Q99543 621 aaKnown RBP5.66□□□□□ -1.5
PDLIM5-211ENST00000508531 CABP5Q9NP86 173 aa5.66□□□□□ -1.5
PDLIM5-211ENST00000508531 KCMF1Q9P0J7 381 aa5.66□□□□□ -1.5
PDLIM5-211ENST00000508531 NUDCQ9Y266 331 aa5.66□□□□□ -1.5
PDLIM5-211ENST00000508531 CFAP74Q9C0B2 1584 aa5.66□□□□□ -1.5
PDLIM5-211ENST00000508531 PLCH2O75038 1416 aa5.65□□□□□ -1.5
PDLIM5-211ENST00000508531 NPATQ14207 1427 aa5.65□□□□□ -1.5
PDLIM5-211ENST00000508531 NUP153P49790 1475 aaKnown RBP5.65□□□□□ -1.5
PDLIM5-211ENST00000508531 NCOA2Q15596 1464 aa5.65□□□□□ -1.5
PDLIM5-211ENST00000508531 RPS6KA4O75676 772 aa5.65□□□□□ -1.5
PDLIM5-211ENST00000508531 DNAJC8O75937 253 aaPredicted RBP5.65□□□□□ -1.5
PDLIM5-211ENST00000508531 CYP17A1P05093 508 aa5.65□□□□□ -1.5
PDLIM5-211ENST00000508531 HNRNPLP14866 589 aaKnown RBP eCLIP5.65□□□□□ -1.5
PDLIM5-211ENST00000508531 MAN2A2P49641 1150 aa5.65□□□□□ -1.5
PDLIM5-211ENST00000508531 SLC25A3Q00325 362 aa5.65□□□□□ -1.5
PDLIM5-211ENST00000508531 BECN1Q14457 450 aa5.65□□□□□ -1.5
PDLIM5-211ENST00000508531 MYBPC3Q14896 1274 aa5.65□□□□□ -1.5
PDLIM5-211ENST00000508531 FNDC3BQ53EP0 1204 aaKnown RBP5.65□□□□□ -1.5
PDLIM5-211ENST00000508531 PIK3R6Q5UE93 754 aa5.65□□□□□ -1.5
PDLIM5-211ENST00000508531 KRT40Q6A162 431 aa5.65□□□□□ -1.5
PDLIM5-211ENST00000508531 CLEC14AQ86T13 490 aa5.65□□□□□ -1.5
PDLIM5-211ENST00000508531 C16orf92Q96LL3 132 aa5.65□□□□□ -1.5
PDLIM5-211ENST00000508531 WDR92Q96MX6 357 aa5.65□□□□□ -1.5
PDLIM5-211ENST00000508531 TCF25Q9BQ70 676 aa5.65□□□□□ -1.5
PDLIM5-211ENST00000508531 OSBPL2Q9H1P3 480 aa5.65□□□□□ -1.5
PDLIM5-211ENST00000508531 IL23AQ9NPF7 189 aa5.65□□□□□ -1.5
PDLIM5-211ENST00000508531 RCAN3Q9UKA8 241 aa5.65□□□□□ -1.5
PDLIM5-211ENST00000508531 LAS1LQ9Y4W2 734 aaKnown RBP5.65□□□□□ -1.5
PDLIM5-211ENST00000508531 TONSLQ96HA7 1378 aa5.65□□□□□ -1.51
PDLIM5-211ENST00000508531 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.65□□□□□ -1.51
PDLIM5-211ENST00000508531 SUPT6HQ7KZ85 1726 aaKnown RBP5.65□□□□□ -1.51
PDLIM5-211ENST00000508531 CNTLNQ9NXG0 1405 aa5.65□□□□□ -1.51
PDLIM5-211ENST00000508531 RAPGEF6Q8TEU7 1601 aa5.64□□□□□ -1.51
PDLIM5-211ENST00000508531 A0A0U1RQG5 324 aaPredicted RBP5.64□□□□□ -1.51
PDLIM5-211ENST00000508531 TOX4O94842 621 aa5.64□□□□□ -1.51
PDLIM5-211ENST00000508531 KIF20AO95235 890 aa5.64□□□□□ -1.51
PDLIM5-211ENST00000508531 SLC9A1P19634 815 aa5.64□□□□□ -1.51
PDLIM5-211ENST00000508531 PURAQ00577 322 aaKnown RBP5.64□□□□□ -1.51
PDLIM5-211ENST00000508531 SF3A1Q15459 793 aaKnown RBP5.64□□□□□ -1.51
PDLIM5-211ENST00000508531 GAGE13Q4V321 117 aa5.64□□□□□ -1.51
PDLIM5-211ENST00000508531 GSPT2Q8IYD1 628 aaKnown RBP5.64□□□□□ -1.51
PDLIM5-211ENST00000508531 IPO4Q8TEX9 1081 aaKnown RBP5.64□□□□□ -1.51
PDLIM5-211ENST00000508531 RPGRQ92834 1020 aaKnown RBP5.64□□□□□ -1.51
PDLIM5-211ENST00000508531 NCDNQ9UBB6 729 aa5.64□□□□□ -1.51
PDLIM5-211ENST00000508531 LRRC7Q96NW7 1537 aa5.64□□□□□ -1.51
PDLIM5-211ENST00000508531 DIP2CQ9Y2E4 1556 aa5.63□□□□□ -1.51
PDLIM5-211ENST00000508531 DAPK3O43293 454 aa5.63□□□□□ -1.51
PDLIM5-211ENST00000508531 PEX11BO96011 259 aa5.63□□□□□ -1.51
PDLIM5-211ENST00000508531 VSIG10L2P0DP72 767 aa5.63□□□□□ -1.51
PDLIM5-211ENST00000508531 SDSP20132 328 aa5.63□□□□□ -1.51
PDLIM5-211ENST00000508531 SQSTM1Q13501 440 aa5.63□□□□□ -1.51
PDLIM5-211ENST00000508531 BMS1Q14692 1282 aaKnown RBP5.63□□□□□ -1.51
PDLIM5-211ENST00000508531 EPHA7Q15375 998 aa5.63□□□□□ -1.51
PDLIM5-211ENST00000508531 FKBP15Q5T1M5 1219 aa5.63□□□□□ -1.51
PDLIM5-211ENST00000508531 ZNF772Q68DY9 489 aaPredicted RBP5.63□□□□□ -1.51
PDLIM5-211ENST00000508531 ZNF662Q6ZS27 426 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms