RNA–Protein interactions for RNA: ENST00000508132.1

CDH6-204, Transcript of cadherin 6, humanhuman

TSL 2

Gene CDH6, Length 678 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-204ENST00000508132 FAM177A1Q8N128 213 aaPredicted RBP8.74□□□□□ -1.01
CDH6-204ENST00000508132 GPT2Q8TD30 523 aa8.74□□□□□ -1.01
CDH6-204ENST00000508132 SOCS4Q8WXH5 440 aa8.74□□□□□ -1.01
CDH6-204ENST00000508132 USP28Q96RU2 1077 aa8.74□□□□□ -1.01
CDH6-204ENST00000508132 OSMRQ99650 979 aa8.74□□□□□ -1.01
CDH6-204ENST00000508132 APBA2Q99767 749 aa8.74□□□□□ -1.01
CDH6-204ENST00000508132 TMPRSS13Q9BYE2 586 aa8.74□□□□□ -1.01
CDH6-204ENST00000508132 KCNH6Q9H252 994 aa8.74□□□□□ -1.01
CDH6-204ENST00000508132 PICK1Q9NRD5 415 aa8.74□□□□□ -1.01
CDH6-204ENST00000508132 FAM86C1Q9NVL1 165 aa8.74□□□□□ -1.01
CDH6-204ENST00000508132 BARHL2Q9NY43 387 aa8.74□□□□□ -1.01
CDH6-204ENST00000508132 RTEL1Q9NZ71 1219 aa8.74□□□□□ -1.01
CDH6-204ENST00000508132 RBPJLQ9UBG7 517 aa8.74□□□□□ -1.01
CDH6-204ENST00000508132 HIF3AQ9Y2N7 669 aa8.74□□□□□ -1.01
CDH6-204ENST00000508132 ELP1O95163 1332 aa8.74□□□□□ -1.01
CDH6-204ENST00000508132 LOC100289279A0A1B0GTE1 492 aa8.73□□□□□ -1.01
CDH6-204ENST00000508132 MEGF11A6BM72 1044 aa8.73□□□□□ -1.01
CDH6-204ENST00000508132 GOLGA6L4A6NEF3 574 aa8.73□□□□□ -1.01
CDH6-204ENST00000508132 TMEM232C9JQI7 657 aa8.73□□□□□ -1.01
CDH6-204ENST00000508132 hCG_1984214I3L0E3 225 aa8.73□□□□□ -1.01
CDH6-204ENST00000508132 STXBP3O00186 592 aa8.73□□□□□ -1.01
CDH6-204ENST00000508132 PQBP1O60828 265 aaKnown RBP8.73□□□□□ -1.01
CDH6-204ENST00000508132 TIAF1O95411 115 aa8.73□□□□□ -1.01
CDH6-204ENST00000508132 MBD3O95983 291 aa8.73□□□□□ -1.01
CDH6-204ENST00000508132 CYBAP13498 195 aa8.73□□□□□ -1.01
CDH6-204ENST00000508132 RGS2P41220 211 aa8.73□□□□□ -1.01
CDH6-204ENST00000508132 NAPAP54920 295 aa8.73□□□□□ -1.01
CDH6-204ENST00000508132 FAAP100Q0VG06 881 aa8.73□□□□□ -1.01
CDH6-204ENST00000508132 IKQ13123 557 aaPredicted RBP8.73□□□□□ -1.01
CDH6-204ENST00000508132 MTMR3Q13615 1198 aa8.73□□□□□ -1.01
CDH6-204ENST00000508132 RILPL1Q5EBL4 403 aa8.73□□□□□ -1.01
CDH6-204ENST00000508132 KIAA1755Q5JYT7 1200 aa8.73□□□□□ -1.01
CDH6-204ENST00000508132 GALNT17Q6IS24 598 aa8.73□□□□□ -1.01
CDH6-204ENST00000508132 XKR5Q6UX68 686 aa8.73□□□□□ -1.01
CDH6-204ENST00000508132 BLIDQ8IZY5 108 aa8.73□□□□□ -1.01
CDH6-204ENST00000508132 SPICE1Q8N0Z3 855 aa8.73□□□□□ -1.01
CDH6-204ENST00000508132 ZNF713Q8N859 430 aaPredicted RBP8.73□□□□□ -1.01
CDH6-204ENST00000508132 TMEM102Q8N9M5 508 aaPredicted RBP8.73□□□□□ -1.01
CDH6-204ENST00000508132 CCDC148Q8NFR7 591 aa8.73□□□□□ -1.01
CDH6-204ENST00000508132 NPLOC4Q8TAT6 608 aa8.73□□□□□ -1.01
CDH6-204ENST00000508132 CCDC12Q8WUD4 166 aaPredicted RBP8.73□□□□□ -1.01
CDH6-204ENST00000508132 NXPE3Q969Y0 559 aa8.73□□□□□ -1.01
CDH6-204ENST00000508132 NUP88Q99567 741 aaPredicted RBP8.73□□□□□ -1.01
CDH6-204ENST00000508132 FTOQ9C0B1 505 aaKnown RBP eCLIP8.73□□□□□ -1.01
CDH6-204ENST00000508132 GZF1Q9H116 711 aaPredicted RBP8.73□□□□□ -1.01
CDH6-204ENST00000508132 VCPKMTQ9H867 229 aa8.73□□□□□ -1.01
CDH6-204ENST00000508132 LATS2Q9NRM7 1088 aa8.73□□□□□ -1.01
CDH6-204ENST00000508132 PCDHA4Q9UN74 947 aa8.73□□□□□ -1.01
CDH6-204ENST00000508132 CLIC4Q9Y696 253 aa8.73□□□□□ -1.01
CDH6-204ENST00000508132 FASNP49327 2511 aaKnown RBP8.73□□□□□ -1.01
CDH6-204ENST00000508132 SMCO2A6NFE2 343 aa8.72□□□□□ -1.01
CDH6-204ENST00000508132 ZBTB5O15062 677 aa8.72□□□□□ -1.01
CDH6-204ENST00000508132 MPSTP25325 297 aa8.72□□□□□ -1.01
CDH6-204ENST00000508132 GNA11P29992 359 aa8.72□□□□□ -1.01
CDH6-204ENST00000508132 NASPP49321 788 aaPredicted RBP8.72□□□□□ -1.01
CDH6-204ENST00000508132 TCF15Q12870 199 aa8.72□□□□□ -1.01
CDH6-204ENST00000508132 SPP2Q13103 211 aa8.72□□□□□ -1.01
CDH6-204ENST00000508132 SLC39A14Q15043 492 aa8.72□□□□□ -1.01
CDH6-204ENST00000508132 STK38Q15208 465 aa8.72□□□□□ -1.01
CDH6-204ENST00000508132 LRRC41Q15345 812 aa8.72□□□□□ -1.01
CDH6-204ENST00000508132 SF3A1Q15459 793 aaKnown RBP8.72□□□□□ -1.01
CDH6-204ENST00000508132 NPY5RQ15761 445 aa8.72□□□□□ -1.01
CDH6-204ENST00000508132 ZYXQ15942 572 aaKnown RBP8.72□□□□□ -1.01
CDH6-204ENST00000508132 FAM83BQ5T0W9 1011 aa8.72□□□□□ -1.01
CDH6-204ENST00000508132 CDPF1Q6NVV7 123 aa8.72□□□□□ -1.01
CDH6-204ENST00000508132 BTNL9Q6UXG8 535 aa8.72□□□□□ -1.01
CDH6-204ENST00000508132 ZNF365Q70YC5 407 aa8.72□□□□□ -1.01
CDH6-204ENST00000508132 SPRED2Q7Z698 418 aa8.72□□□□□ -1.01
CDH6-204ENST00000508132 FAM178BQ8IXR5 827 aa8.72□□□□□ -1.01
CDH6-204ENST00000508132 GJD3Q8N144 294 aa8.72□□□□□ -1.01
CDH6-204ENST00000508132 C12orf50Q8NA57 414 aaPredicted RBP8.72□□□□□ -1.01
CDH6-204ENST00000508132 DAGLBQ8NCG7 672 aa8.72□□□□□ -1.01
CDH6-204ENST00000508132 LINC00301Q8NCQ3 95 aa8.72□□□□□ -1.01
CDH6-204ENST00000508132 HELQQ8TDG4 1101 aa8.72□□□□□ -1.01
CDH6-204ENST00000508132 MTMR8Q96EF0 704 aa8.72□□□□□ -1.01
CDH6-204ENST00000508132 FEZ1Q99689 392 aa8.72□□□□□ -1.01
CDH6-204ENST00000508132 ZMYND12Q9H0C1 365 aa8.72□□□□□ -1.01
CDH6-204ENST00000508132 CERS4Q9HA82 394 aa8.72□□□□□ -1.01
CDH6-204ENST00000508132 SLC28A3Q9HAS3 691 aa8.72□□□□□ -1.01
CDH6-204ENST00000508132 C6orf50Q9HD87 102 aa8.72□□□□□ -1.01
CDH6-204ENST00000508132 ALG13Q9NP73 1137 aaKnown RBP8.72□□□□□ -1.01
CDH6-204ENST00000508132 COG5Q9UP83 839 aa8.72□□□□□ -1.01
CDH6-204ENST00000508132 SPTBN2O15020 2390 aa8.71□□□□□ -1.01
CDH6-204ENST00000508132 KBTBD13C9JR72 458 aa8.71□□□□□ -1.02
CDH6-204ENST00000508132 ADAMTS3O15072 1205 aa8.71□□□□□ -1.02
CDH6-204ENST00000508132 SPTLC2O15270 562 aa8.71□□□□□ -1.02
CDH6-204ENST00000508132 PPP1R11O60927 126 aaPredicted RBP8.71□□□□□ -1.02
CDH6-204ENST00000508132 YEATS4O95619 227 aa8.71□□□□□ -1.02
CDH6-204ENST00000508132 CSF2RAP15509 400 aa8.71□□□□□ -1.02
CDH6-204ENST00000508132 ATP2B1P20020 1258 aa8.71□□□□□ -1.02
CDH6-204ENST00000508132 ADMP35318 185 aa8.71□□□□□ -1.02
CDH6-204ENST00000508132 ME1P48163 572 aa8.71□□□□□ -1.02
CDH6-204ENST00000508132 TOB1P50616 345 aaPredicted RBP8.71□□□□□ -1.02
CDH6-204ENST00000508132 STAT2P52630 851 aa8.71□□□□□ -1.02
CDH6-204ENST00000508132 COL19A1Q14993 1142 aa8.71□□□□□ -1.02
CDH6-204ENST00000508132 QRICH1Q2TAL8 776 aa8.71□□□□□ -1.02
CDH6-204ENST00000508132 EARS2Q5JPH6 523 aaKnown RBP8.71□□□□□ -1.02
CDH6-204ENST00000508132 SYDE2Q5VT97 1194 aa8.71□□□□□ -1.02
CDH6-204ENST00000508132 CAVIN1Q6NZI2 390 aaKnown RBP8.71□□□□□ -1.02
CDH6-204ENST00000508132 PLEKHH3Q7Z736 793 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms