RNA–Protein interactions for RNA: ENST00000508085.1

CDHR2-204, Transcript of cadherin related family member 2, human

TSL 2

Gene CDHR2, Length 577 nt, Biotype retained intron, Subcellular localisation Exosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDHR2-204	ENST00000508085	PADI6	Q6TGC4	694 aa		15.28	■□□□□ 0.04
CDHR2-204	ENST00000508085	GLB1L	Q6UWU2	654 aa		15.28	■□□□□ 0.04
CDHR2-204	ENST00000508085	RBM23	Q86U06	439 aa	Known RBP	15.28	■□□□□ 0.04
CDHR2-204	ENST00000508085	TMEM173	Q86WV6	379 aa	Predicted RBP	15.28	■□□□□ 0.04
CDHR2-204	ENST00000508085	EFHB	Q8N7U6	833 aa		15.28	■□□□□ 0.04
CDHR2-204	ENST00000508085	MCPH1	Q8NEM0	835 aa		15.28	■□□□□ 0.04
CDHR2-204	ENST00000508085	NRDE2	Q9H7Z3	1164 aa		15.28	■□□□□ 0.04
CDHR2-204	ENST00000508085	CD320	Q9NPF0	282 aa		15.28	■□□□□ 0.04
CDHR2-204	ENST00000508085	SPG21	Q9NZD8	308 aa		15.28	■□□□□ 0.04
CDHR2-204	ENST00000508085	SMC3	Q9UQE7	1217 aa		15.28	■□□□□ 0.04
CDHR2-204	ENST00000508085	INPP5F	Q9Y2H2	1132 aa		15.28	■□□□□ 0.04
CDHR2-204	ENST00000508085	CIT	O14578	2027 aa		15.27	■□□□□ 0.04
CDHR2-204	ENST00000508085	PLXNA3	P51805	1871 aa		15.27	■□□□□ 0.04
CDHR2-204	ENST00000508085	PDCD11	Q14690	1871 aa	Known RBP	15.27	■□□□□ 0.04
CDHR2-204	ENST00000508085	ARHGEF35	A5YM69	484 aa		15.27	■□□□□ 0.04
CDHR2-204	ENST00000508085	NT5C1B-RDH14	C9J2C7	533 aa		15.27	■□□□□ 0.04
CDHR2-204	ENST00000508085	ZC3H11A	O75152	810 aa	Known RBP eCLIP	15.27	■□□□□ 0.04
CDHR2-204	ENST00000508085	ARF4	P18085	180 aa	Predicted RBP	15.27	■□□□□ 0.04
CDHR2-204	ENST00000508085	CYP11B2	P19099	503 aa		15.27	■□□□□ 0.04
CDHR2-204	ENST00000508085	PPM1A	P35813	382 aa		15.27	■□□□□ 0.04
CDHR2-204	ENST00000508085	RBM10	P98175	930 aa	Known RBP	15.27	■□□□□ 0.04
CDHR2-204	ENST00000508085	ATP2C1	P98194	919 aa	Predicted RBP	15.27	■□□□□ 0.04
CDHR2-204	ENST00000508085	CUL4A	Q13619	759 aa		15.27	■□□□□ 0.04
CDHR2-204	ENST00000508085	PCBP1	Q15365	356 aa	Known RBP eCLIP	15.27	■□□□□ 0.04
CDHR2-204	ENST00000508085	CLUL1	Q15846	466 aa		15.27	■□□□□ 0.04
CDHR2-204	ENST00000508085	RILPL1	Q5EBL4	403 aa		15.27	■□□□□ 0.04
CDHR2-204	ENST00000508085	PLPP4	Q5VZY2	271 aa		15.27	■□□□□ 0.04
CDHR2-204	ENST00000508085	CDCA2	Q69YH5	1023 aa	Predicted RBP	15.27	■□□□□ 0.04
CDHR2-204	ENST00000508085	FAM178B	Q8IXR5	827 aa		15.27	■□□□□ 0.04
CDHR2-204	ENST00000508085	VN1R2	Q8NFZ6	395 aa		15.27	■□□□□ 0.04
CDHR2-204	ENST00000508085	SNX29	Q8TEQ0	813 aa		15.27	■□□□□ 0.04
CDHR2-204	ENST00000508085	BCL7C	Q8WUZ0	217 aa	Predicted RBP	15.27	■□□□□ 0.04
CDHR2-204	ENST00000508085	RSPH1	Q8WYR4	309 aa		15.27	■□□□□ 0.04
CDHR2-204	ENST00000508085	PGBD4	Q96DM1	585 aa		15.27	■□□□□ 0.04
CDHR2-204	ENST00000508085	MSLNL	Q96KJ4	702 aa		15.27	■□□□□ 0.04
CDHR2-204	ENST00000508085	MMTAG2	Q9BU76	263 aa	Known RBP	15.27	■□□□□ 0.04
CDHR2-204	ENST00000508085	RNF39	Q9H2S5	420 aa		15.27	■□□□□ 0.04
CDHR2-204	ENST00000508085	CLEC1B	Q9P126	229 aa		15.27	■□□□□ 0.04
CDHR2-204	ENST00000508085	DNAJB4	Q9UDY4	337 aa		15.27	■□□□□ 0.04
CDHR2-204	ENST00000508085	IPP	Q9Y573	584 aa		15.27	■□□□□ 0.04
CDHR2-204	ENST00000508085	CNTNAP2	Q9UHC6	1331 aa		15.26	■□□□□ 0.03
CDHR2-204	ENST00000508085	LRRIQ4	A6NIV6	560 aa		15.26	■□□□□ 0.03
CDHR2-204	ENST00000508085	TTLL13P	A6NNM8	815 aa		15.26	■□□□□ 0.03
CDHR2-204	ENST00000508085	HIDE1	A8MVS5	230 aa		15.26	■□□□□ 0.03
CDHR2-204	ENST00000508085		H3BQV1	296 aa		15.26	■□□□□ 0.03
CDHR2-204	ENST00000508085	LAD1	O00515	517 aa		15.26	■□□□□ 0.03
CDHR2-204	ENST00000508085	PER2	O15055	1255 aa		15.26	■□□□□ 0.03
CDHR2-204	ENST00000508085	NCL	P19338	710 aa	Known RBP	15.26	■□□□□ 0.03
CDHR2-204	ENST00000508085	CDC25A	P30304	524 aa		15.26	■□□□□ 0.03
CDHR2-204	ENST00000508085	AXL	P30530	894 aa		15.26	■□□□□ 0.03
CDHR2-204	ENST00000508085	PUS10	Q3MIT2	529 aa	Known RBP	15.26	■□□□□ 0.03
CDHR2-204	ENST00000508085	NOTUM	Q6P988	496 aa		15.26	■□□□□ 0.03
CDHR2-204	ENST00000508085	CDR2L	Q86X02	465 aa	Predicted RBP	15.26	■□□□□ 0.03
CDHR2-204	ENST00000508085	ZNF280B	Q86YH2	543 aa		15.26	■□□□□ 0.03
CDHR2-204	ENST00000508085	MICAL1	Q8TDZ2	1067 aa		15.26	■□□□□ 0.03
CDHR2-204	ENST00000508085	KHSRP	Q92945	711 aa	Known RBP eCLIP	15.26	■□□□□ 0.03
CDHR2-204	ENST00000508085	PPP2R3C	Q969Q6	453 aa		15.26	■□□□□ 0.03
CDHR2-204	ENST00000508085	CCDC51	Q96ER9	411 aa		15.26	■□□□□ 0.03
CDHR2-204	ENST00000508085	TCF25	Q9BQ70	676 aa		15.26	■□□□□ 0.03
CDHR2-204	ENST00000508085	CSRNP2	Q9H175	543 aa		15.26	■□□□□ 0.03
CDHR2-204	ENST00000508085	BHMT2	Q9H2M3	363 aa		15.26	■□□□□ 0.03
CDHR2-204	ENST00000508085	RSAD1	Q9HA92	442 aa		15.26	■□□□□ 0.03
CDHR2-204	ENST00000508085	POLD4	Q9HCU8	107 aa		15.26	■□□□□ 0.03
CDHR2-204	ENST00000508085	DDX19A	Q9NUU7	478 aa	Known RBP	15.26	■□□□□ 0.03
CDHR2-204	ENST00000508085	KIAA1024	Q9UPX6	916 aa		15.26	■□□□□ 0.03
CDHR2-204	ENST00000508085	HES2	Q9Y543	173 aa		15.26	■□□□□ 0.03
CDHR2-204	ENST00000508085	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	15.26	■□□□□ 0.03
CDHR2-204	ENST00000508085	C2orf16	Q68DN1	1984 aa		15.25	■□□□□ 0.03
CDHR2-204	ENST00000508085	MTCL1	Q9Y4B5	1905 aa	Known RBP	15.25	■□□□□ 0.03
CDHR2-204	ENST00000508085	MBTPS2	O43462	519 aa		15.25	■□□□□ 0.03
CDHR2-204	ENST00000508085	DDHD2	O94830	711 aa		15.25	■□□□□ 0.03
CDHR2-204	ENST00000508085	EDN1	P05305	212 aa		15.25	■□□□□ 0.03
CDHR2-204	ENST00000508085	KCNC3	Q14003	757 aa		15.25	■□□□□ 0.03
CDHR2-204	ENST00000508085	DUSP6	Q16828	381 aa		15.25	■□□□□ 0.03
CDHR2-204	ENST00000508085	LARP1B	Q659C4	914 aa	Known RBP	15.25	■□□□□ 0.03
CDHR2-204	ENST00000508085	PDE12	Q6L8Q7	609 aa	Known RBP	15.25	■□□□□ 0.03
CDHR2-204	ENST00000508085	PPP4R3CP	Q6ZMV5	832 aa		15.25	■□□□□ 0.03
CDHR2-204	ENST00000508085	KCNK18	Q7Z418	384 aa		15.25	■□□□□ 0.03
CDHR2-204	ENST00000508085	VN1R3	Q9BXE9	311 aa		15.25	■□□□□ 0.03
CDHR2-204	ENST00000508085	RAB34	Q9BZG1	259 aa		15.25	■□□□□ 0.03
CDHR2-204	ENST00000508085	GBP3	Q9H0R5	595 aa		15.25	■□□□□ 0.03
CDHR2-204	ENST00000508085	NXF3	Q9H4D5	531 aa	Known RBP	15.25	■□□□□ 0.03
CDHR2-204	ENST00000508085	TLE6	Q9H808	572 aa		15.25	■□□□□ 0.03
CDHR2-204	ENST00000508085	ENTPD7	Q9NQZ7	604 aa		15.25	■□□□□ 0.03
CDHR2-204	ENST00000508085	BARX2	Q9UMQ3	279 aa	Predicted RBP	15.25	■□□□□ 0.03
CDHR2-204	ENST00000508085		E9PMD0	336 aa		15.24	■□□□□ 0.03
CDHR2-204	ENST00000508085	INPPL1	O15357	1258 aa		15.24	■□□□□ 0.03
CDHR2-204	ENST00000508085	GALT	P07902	379 aa		15.24	■□□□□ 0.03
CDHR2-204	ENST00000508085	ITGA4	P13612	1032 aa		15.24	■□□□□ 0.03
CDHR2-204	ENST00000508085	SLC11A1	P49279	550 aa		15.24	■□□□□ 0.03
CDHR2-204	ENST00000508085	ALDH7A1	P49419	539 aa	Known RBP	15.24	■□□□□ 0.03
CDHR2-204	ENST00000508085	NDUFV1	P49821	464 aa		15.24	■□□□□ 0.03
CDHR2-204	ENST00000508085	KRT17	Q04695	432 aa		15.24	■□□□□ 0.03
CDHR2-204	ENST00000508085	RNASEL	Q05823	741 aa	Known RBP	15.24	■□□□□ 0.03
CDHR2-204	ENST00000508085	FAM187B	Q17R55	369 aa		15.24	■□□□□ 0.03
CDHR2-204	ENST00000508085	DTHD1	Q6ZMT9	781 aa		15.24	■□□□□ 0.03
CDHR2-204	ENST00000508085	URGCP	Q8TCY9	931 aa		15.24	■□□□□ 0.03
CDHR2-204	ENST00000508085	IGSF21	Q96ID5	467 aa		15.24	■□□□□ 0.03
CDHR2-204	ENST00000508085	CCDC113	Q9H0I3	377 aa		15.24	■□□□□ 0.03
CDHR2-204	ENST00000508085	FZD8	Q9H461	694 aa		15.24	■□□□□ 0.03

Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms