RNA–Protein interactions for RNA: ENST00000506831.1

CCHCR1-220, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 2

Gene CCHCR1, Length 861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-220ENST00000506831 CFAP54Q96N23 3096 aa12.66□□□□□ -0.38
CCHCR1-220ENST00000506831 CNTNAP2Q9UHC6 1331 aa12.65□□□□□ -0.38
CCHCR1-220ENST00000506831 DDX11L8A8MPP1 907 aa12.65□□□□□ -0.38
CCHCR1-220ENST00000506831 PDGFBP01127 241 aaPredicted RBP12.65□□□□□ -0.38
CCHCR1-220ENST00000506831 ALDH2P05091 517 aa12.65□□□□□ -0.38
CCHCR1-220ENST00000506831 EPCAMP16422 314 aa12.65□□□□□ -0.38
CCHCR1-220ENST00000506831 SP100P23497 879 aaPredicted RBP12.65□□□□□ -0.38
CCHCR1-220ENST00000506831 CA8P35219 290 aa12.65□□□□□ -0.38
CCHCR1-220ENST00000506831 QARSP47897 775 aaKnown RBP12.65□□□□□ -0.38
CCHCR1-220ENST00000506831 CLCN5P51795 746 aa12.65□□□□□ -0.38
CCHCR1-220ENST00000506831 RNASELQ05823 741 aaKnown RBP12.65□□□□□ -0.38
CCHCR1-220ENST00000506831 PPP2R5CQ13362 524 aa12.65□□□□□ -0.38
CCHCR1-220ENST00000506831 NONOQ15233 471 aaKnown RBP eCLIP12.65□□□□□ -0.38
CCHCR1-220ENST00000506831 SRGAP1Q7Z6B7 1085 aa12.65□□□□□ -0.38
CCHCR1-220ENST00000506831 GPR149Q86SP6 731 aa12.65□□□□□ -0.38
CCHCR1-220ENST00000506831 CABP7Q86V35 215 aa12.65□□□□□ -0.38
CCHCR1-220ENST00000506831 SLC7A3Q8WY07 619 aa12.65□□□□□ -0.38
CCHCR1-220ENST00000506831 LPPQ93052 612 aa12.65□□□□□ -0.38
CCHCR1-220ENST00000506831 ACSF2Q96CM8 615 aaPredicted RBP12.65□□□□□ -0.38
CCHCR1-220ENST00000506831 FAM20AQ96MK3 541 aa12.65□□□□□ -0.38
CCHCR1-220ENST00000506831 EMILIN2Q9BXX0 1053 aa12.65□□□□□ -0.38
CCHCR1-220ENST00000506831 SFXN1Q9H9B4 322 aa12.65□□□□□ -0.38
CCHCR1-220ENST00000506831 CYP26B1Q9NR63 512 aa12.65□□□□□ -0.38
CCHCR1-220ENST00000506831 FOXD4L1Q9NU39 408 aa12.65□□□□□ -0.38
CCHCR1-220ENST00000506831 AGPAT5Q9NUQ2 364 aa12.65□□□□□ -0.38
CCHCR1-220ENST00000506831 LIMD1Q9UGP4 676 aa12.65□□□□□ -0.38
CCHCR1-220ENST00000506831 DDX25Q9UHL0 483 aaKnown RBP12.65□□□□□ -0.38
CCHCR1-220ENST00000506831 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.65□□□□□ -0.38
CCHCR1-220ENST00000506831 PCDHB2Q9Y5E7 798 aa12.65□□□□□ -0.38
CCHCR1-220ENST00000506831 SPTBN4Q9H254 2564 aa12.64□□□□□ -0.39
CCHCR1-220ENST00000506831 TMEM150BA6NC51 233 aa12.64□□□□□ -0.39
CCHCR1-220ENST00000506831 H0Y858 1186 aa12.64□□□□□ -0.39
CCHCR1-220ENST00000506831 ASAP2O43150 1006 aa12.64□□□□□ -0.39
CCHCR1-220ENST00000506831 GAS2O43903 313 aaKnown RBP12.64□□□□□ -0.39
CCHCR1-220ENST00000506831 LILRB3O75022 631 aa12.64□□□□□ -0.39
CCHCR1-220ENST00000506831 P4HBP07237 508 aaKnown RBP12.64□□□□□ -0.39
CCHCR1-220ENST00000506831 FDPSP14324 419 aaKnown RBP12.64□□□□□ -0.39
CCHCR1-220ENST00000506831 RFC5P40937 340 aa12.64□□□□□ -0.39
CCHCR1-220ENST00000506831 SLC11A1P49279 550 aa12.64□□□□□ -0.39
CCHCR1-220ENST00000506831 HMGN5P82970 282 aaKnown RBP12.64□□□□□ -0.39
CCHCR1-220ENST00000506831 PCBP1Q15365 356 aaKnown RBP eCLIP12.64□□□□□ -0.39
CCHCR1-220ENST00000506831 PTPN14Q15678 1187 aa12.64□□□□□ -0.39
CCHCR1-220ENST00000506831 NPY5RQ15761 445 aa12.64□□□□□ -0.39
CCHCR1-220ENST00000506831 ASTLQ6HA08 431 aaPredicted RBP12.64□□□□□ -0.39
CCHCR1-220ENST00000506831 PPP4R3AQ6IN85 833 aa12.64□□□□□ -0.39
CCHCR1-220ENST00000506831 AGMOQ6ZNB7 445 aa12.64□□□□□ -0.39
CCHCR1-220ENST00000506831 C15orf39Q6ZRI6 1047 aa12.64□□□□□ -0.39
CCHCR1-220ENST00000506831 OTOP3Q7RTS5 596 aa12.64□□□□□ -0.39
CCHCR1-220ENST00000506831 KRT25Q7Z3Z0 450 aa12.64□□□□□ -0.39
CCHCR1-220ENST00000506831 C12orf76Q8N812 135 aaPredicted RBP12.64□□□□□ -0.39
CCHCR1-220ENST00000506831 CNNM3Q8NE01 707 aa12.64□□□□□ -0.39
CCHCR1-220ENST00000506831 URGCPQ8TCY9 931 aa12.64□□□□□ -0.39
CCHCR1-220ENST00000506831 AUTS2Q8WXX7 1259 aa12.64□□□□□ -0.39
CCHCR1-220ENST00000506831 INTS4Q96HW7 963 aaKnown RBP12.64□□□□□ -0.39
CCHCR1-220ENST00000506831 NLRP4Q96MN2 994 aa12.64□□□□□ -0.39
CCHCR1-220ENST00000506831 KLHL5Q96PQ7 755 aa12.64□□□□□ -0.39
CCHCR1-220ENST00000506831 RHOBTB2Q9BYZ6 727 aa12.64□□□□□ -0.39
CCHCR1-220ENST00000506831 DHX33Q9H6R0 707 aaKnown RBP12.64□□□□□ -0.39
CCHCR1-220ENST00000506831 UBN1Q9NPG3 1134 aa12.64□□□□□ -0.39
CCHCR1-220ENST00000506831 DNAJB4Q9UDY4 337 aa12.64□□□□□ -0.39
CCHCR1-220ENST00000506831 SMC3Q9UQE7 1217 aa12.64□□□□□ -0.39
CCHCR1-220ENST00000506831 SSX2IPQ9Y2D8 614 aa12.64□□□□□ -0.39
CCHCR1-220ENST00000506831 COL4A3BPQ9Y5P4 624 aa12.64□□□□□ -0.39
CCHCR1-220ENST00000506831 DENND4AQ7Z401 1863 aa12.63□□□□□ -0.39
CCHCR1-220ENST00000506831 DMDP11532 3685 aa12.63□□□□□ -0.39
CCHCR1-220ENST00000506831 MEIS3P2A8K0S8 358 aa12.63□□□□□ -0.39
CCHCR1-220ENST00000506831 TBX3O15119 743 aa12.63□□□□□ -0.39
CCHCR1-220ENST00000506831 C1RP00736 705 aa12.63□□□□□ -0.39
CCHCR1-220ENST00000506831 HSP90AA1P07900 732 aaKnown RBP12.63□□□□□ -0.39
CCHCR1-220ENST00000506831 WEE2P0C1S8 567 aa12.63□□□□□ -0.39
CCHCR1-220ENST00000506831 GCFC2P16383 781 aaKnown RBP12.63□□□□□ -0.39
CCHCR1-220ENST00000506831 GJB2P29033 226 aa12.63□□□□□ -0.39
CCHCR1-220ENST00000506831 NBL1P41271 181 aa12.63□□□□□ -0.39
CCHCR1-220ENST00000506831 CLCN4P51793 760 aa12.63□□□□□ -0.39
CCHCR1-220ENST00000506831 CYP26C1Q6V0L0 522 aa12.63□□□□□ -0.39
CCHCR1-220ENST00000506831 CCDC149Q6ZUS6 474 aa12.63□□□□□ -0.39
CCHCR1-220ENST00000506831 ZNF280BQ86YH2 543 aa12.63□□□□□ -0.39
CCHCR1-220ENST00000506831 KSR1Q8IVT5 923 aa12.63□□□□□ -0.39
CCHCR1-220ENST00000506831 C4orf19Q8IY42 314 aa12.63□□□□□ -0.39
CCHCR1-220ENST00000506831 TMEM105Q8N8V8 129 aa12.63□□□□□ -0.39
CCHCR1-220ENST00000506831 FAM184AQ8NB25 1140 aa12.63□□□□□ -0.39
CCHCR1-220ENST00000506831 CMASQ8NFW8 434 aaPredicted RBP12.63□□□□□ -0.39
CCHCR1-220ENST00000506831 BCL7CQ8WUZ0 217 aaPredicted RBP12.63□□□□□ -0.39
CCHCR1-220ENST00000506831 TCP11Q8WWU5 503 aa12.63□□□□□ -0.39
CCHCR1-220ENST00000506831 PSPC1Q8WXF1 523 aaKnown RBP12.63□□□□□ -0.39
CCHCR1-220ENST00000506831 WASF1Q92558 559 aa12.63□□□□□ -0.39
CCHCR1-220ENST00000506831 AIFM3Q96NN9 605 aa12.63□□□□□ -0.39
CCHCR1-220ENST00000506831 FAM193BQ96PV7 902 aaPredicted RBP12.63□□□□□ -0.39
CCHCR1-220ENST00000506831 NAP1L4Q99733 375 aaKnown RBP12.63□□□□□ -0.39
CCHCR1-220ENST00000506831 SH2D3AQ9BRG2 576 aa12.63□□□□□ -0.39
CCHCR1-220ENST00000506831 VN1R3Q9BXE9 311 aa12.63□□□□□ -0.39
CCHCR1-220ENST00000506831 RSAD1Q9HA92 442 aa12.63□□□□□ -0.39
CCHCR1-220ENST00000506831 KCNMB3Q9NPA1 279 aa12.63□□□□□ -0.39
CCHCR1-220ENST00000506831 MRPL17Q9NRX2 175 aaKnown RBP12.63□□□□□ -0.39
CCHCR1-220ENST00000506831 FAM86C1Q9NVL1 165 aa12.63□□□□□ -0.39
CCHCR1-220ENST00000506831 DPP7Q9UHL4 492 aa12.63□□□□□ -0.39
CCHCR1-220ENST00000506831 INPP5FQ9Y2H2 1132 aa12.63□□□□□ -0.39
CCHCR1-220ENST00000506831 FAN1Q9Y2M0 1017 aa12.63□□□□□ -0.39
CCHCR1-220ENST00000506831 PLXNA3P51805 1871 aa12.63□□□□□ -0.39
CCHCR1-220ENST00000506831 EML1O00423 815 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms