RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 POTEGQ6S5H5 508 aa10.09□□□□□ -0.79
PDLIM5-209ENST00000506632 AGMOQ6ZNB7 445 aa10.09□□□□□ -0.79
PDLIM5-209ENST00000506632 TBC1D13Q9NVG8 400 aa10.09□□□□□ -0.79
PDLIM5-209ENST00000506632 SPG21Q9NZD8 308 aa10.09□□□□□ -0.79
PDLIM5-209ENST00000506632 CLEC1BQ9P126 229 aa10.09□□□□□ -0.79
PDLIM5-209ENST00000506632 NOL7Q9UMY1 257 aaKnown RBP10.09□□□□□ -0.79
PDLIM5-209ENST00000506632 PCDHB6Q9Y5E3 794 aa10.09□□□□□ -0.79
PDLIM5-209ENST00000506632 PCDHB2Q9Y5E7 798 aa10.09□□□□□ -0.79
PDLIM5-209ENST00000506632 INPPL1O15357 1258 aa10.08□□□□□ -0.8
PDLIM5-209ENST00000506632 MBTPS2O43462 519 aa10.08□□□□□ -0.8
PDLIM5-209ENST00000506632 B4GALT3O60512 393 aa10.08□□□□□ -0.8
PDLIM5-209ENST00000506632 USO1O60763 962 aaKnown RBP10.08□□□□□ -0.8
PDLIM5-209ENST00000506632 EYA4O95677 639 aa10.08□□□□□ -0.8
PDLIM5-209ENST00000506632 NCLP19338 710 aaKnown RBP10.08□□□□□ -0.8
PDLIM5-209ENST00000506632 BCAR1P56945 870 aa10.08□□□□□ -0.8
PDLIM5-209ENST00000506632 GNL2Q13823 731 aaKnown RBP10.08□□□□□ -0.8
PDLIM5-209ENST00000506632 TFDP1Q14186 410 aa10.08□□□□□ -0.8
PDLIM5-209ENST00000506632 PDIA5Q14554 519 aa10.08□□□□□ -0.8
PDLIM5-209ENST00000506632 ECM1Q16610 540 aa10.08□□□□□ -0.8
PDLIM5-209ENST00000506632 DUSP6Q16828 381 aa10.08□□□□□ -0.8
PDLIM5-209ENST00000506632 NOMO2Q5JPE7 1267 aa10.08□□□□□ -0.8
PDLIM5-209ENST00000506632 GLB1LQ6UWU2 654 aa10.08□□□□□ -0.8
PDLIM5-209ENST00000506632 EP400NLQ6ZTU2 488 aa10.08□□□□□ -0.8
PDLIM5-209ENST00000506632 IGSF22Q8N9C0 903 aa10.08□□□□□ -0.8
PDLIM5-209ENST00000506632 SMG8Q8ND04 991 aaKnown RBP10.08□□□□□ -0.8
PDLIM5-209ENST00000506632 MCPH1Q8NEM0 835 aa10.08□□□□□ -0.8
PDLIM5-209ENST00000506632 VN1R2Q8NFZ6 395 aa10.08□□□□□ -0.8
PDLIM5-209ENST00000506632 ERMNQ8TAM6 284 aa10.08□□□□□ -0.8
PDLIM5-209ENST00000506632 KCNV2Q8TDN2 545 aa10.08□□□□□ -0.8
PDLIM5-209ENST00000506632 KHSRPQ92945 711 aaKnown RBP eCLIP10.08□□□□□ -0.82e-6■■■□□ 15.9
PDLIM5-209ENST00000506632 PGBD4Q96DM1 585 aa10.08□□□□□ -0.8
PDLIM5-209ENST00000506632 CCDC51Q96ER9 411 aa10.08□□□□□ -0.8
PDLIM5-209ENST00000506632 NACC1Q96RE7 527 aa10.08□□□□□ -0.8
PDLIM5-209ENST00000506632 CDCA3Q99618 268 aaPredicted RBP10.08□□□□□ -0.8
PDLIM5-209ENST00000506632 POLR3FQ9H1D9 316 aaPredicted RBP10.08□□□□□ -0.8
PDLIM5-209ENST00000506632 IGFLR1Q9H665 355 aa10.08□□□□□ -0.8
PDLIM5-209ENST00000506632 NRDE2Q9H7Z3 1164 aa10.08□□□□□ -0.8
PDLIM5-209ENST00000506632 UPF2Q9HAU5 1272 aaKnown RBP10.08□□□□□ -0.8
PDLIM5-209ENST00000506632 NGRNQ9NPE2 291 aaKnown RBP10.08□□□□□ -0.8
PDLIM5-209ENST00000506632 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.08□□□□□ -0.8
PDLIM5-209ENST00000506632 PRKAG3Q9UGI9 489 aa10.08□□□□□ -0.8
PDLIM5-209ENST00000506632 KIF3AQ9Y496 699 aa10.08□□□□□ -0.8
PDLIM5-209ENST00000506632 CNTNAP2Q9UHC6 1331 aa10.07□□□□□ -0.8
PDLIM5-209ENST00000506632 FSD2A1L4K1 749 aa10.07□□□□□ -0.8
PDLIM5-209ENST00000506632 CARNS1A5YM72 827 aa10.07□□□□□ -0.8
PDLIM5-209ENST00000506632 C19orf67A6NJJ6 358 aa10.07□□□□□ -0.8
PDLIM5-209ENST00000506632 LAD1O00515 517 aa10.07□□□□□ -0.8
PDLIM5-209ENST00000506632 ERLIN2O94905 339 aa10.07□□□□□ -0.8
PDLIM5-209ENST00000506632 ARF4P18085 180 aaPredicted RBP10.07□□□□□ -0.8
PDLIM5-209ENST00000506632 CYP11B2P19099 503 aa10.07□□□□□ -0.8
PDLIM5-209ENST00000506632 GJB2P29033 226 aa10.07□□□□□ -0.8
PDLIM5-209ENST00000506632 PRPHP41219 470 aa10.07□□□□□ -0.8
PDLIM5-209ENST00000506632 ALDH7A1P49419 539 aaKnown RBP10.07□□□□□ -0.8
PDLIM5-209ENST00000506632 MCM2P49736 904 aa10.07□□□□□ -0.8
PDLIM5-209ENST00000506632 NDUFV1P49821 464 aa10.07□□□□□ -0.8
PDLIM5-209ENST00000506632 AFF1P51825 1210 aaKnown RBP10.07□□□□□ -0.8
PDLIM5-209ENST00000506632 KRT17Q04695 432 aa10.07□□□□□ -0.8
PDLIM5-209ENST00000506632 ZP2Q05996 745 aa10.07□□□□□ -0.8
PDLIM5-209ENST00000506632 COASYQ13057 564 aa10.07□□□□□ -0.8
PDLIM5-209ENST00000506632 PTGDRQ13258 359 aa10.07□□□□□ -0.8
PDLIM5-209ENST00000506632 SMAD4Q13485 552 aaKnown RBP10.07□□□□□ -0.8
PDLIM5-209ENST00000506632 LONRF3Q496Y0 759 aa10.07□□□□□ -0.8
PDLIM5-209ENST00000506632 HAUS3Q68CZ6 603 aa10.07□□□□□ -0.8
PDLIM5-209ENST00000506632 CDCA2Q69YH5 1023 aaPredicted RBP10.07□□□□□ -0.8
PDLIM5-209ENST00000506632 NOTUMQ6P988 496 aa10.07□□□□□ -0.8
PDLIM5-209ENST00000506632 TMEM184AQ6ZMB5 413 aa10.07□□□□□ -0.8
PDLIM5-209ENST00000506632 RBM23Q86U06 439 aaKnown RBP10.07□□□□□ -0.8
PDLIM5-209ENST00000506632 TMEM173Q86WV6 379 aaPredicted RBP10.07□□□□□ -0.8
PDLIM5-209ENST00000506632 GJD3Q8N144 294 aa10.07□□□□□ -0.8
PDLIM5-209ENST00000506632 SMRP1Q8NCR6 262 aa10.07□□□□□ -0.8
PDLIM5-209ENST00000506632 CNNM3Q8NE01 707 aa10.07□□□□□ -0.8
PDLIM5-209ENST00000506632 MICAL1Q8TDZ2 1067 aa10.07□□□□□ -0.8
PDLIM5-209ENST00000506632 CCDC43Q96MW1 224 aaKnown RBP10.07□□□□□ -0.8
PDLIM5-209ENST00000506632 TCF25Q9BQ70 676 aa10.07□□□□□ -0.8
PDLIM5-209ENST00000506632 EIF2AQ9BY44 585 aaKnown RBP10.07□□□□□ -0.8
PDLIM5-209ENST00000506632 CSRNP2Q9H175 543 aa10.07□□□□□ -0.8
PDLIM5-209ENST00000506632 TLE6Q9H808 572 aa10.07□□□□□ -0.8
PDLIM5-209ENST00000506632 RSAD1Q9HA92 442 aa10.07□□□□□ -0.8
PDLIM5-209ENST00000506632 GPRC5CQ9NQ84 441 aa10.07□□□□□ -0.8
PDLIM5-209ENST00000506632 LRWD1Q9UFC0 647 aa10.07□□□□□ -0.8
PDLIM5-209ENST00000506632 PUF60Q9UHX1 559 aaKnown RBP10.07□□□□□ -0.8
PDLIM5-209ENST00000506632 CD207Q9UJ71 328 aa10.07□□□□□ -0.8
PDLIM5-209ENST00000506632 FAM50BQ9Y247 325 aa10.07□□□□□ -0.8
PDLIM5-209ENST00000506632 A0A1B0GUA9 196 aa10.06□□□□□ -0.8
PDLIM5-209ENST00000506632 HIDE1A8MVS5 230 aa10.06□□□□□ -0.8
PDLIM5-209ENST00000506632 NT5C1B-RDH14C9J2C7 533 aa10.06□□□□□ -0.8
PDLIM5-209ENST00000506632 INO80B-WBP1J3KQ70 363 aa10.06□□□□□ -0.8
PDLIM5-209ENST00000506632 PER2O15055 1255 aa10.06□□□□□ -0.8
PDLIM5-209ENST00000506632 B4GALT5O43286 388 aa10.06□□□□□ -0.8
PDLIM5-209ENST00000506632 ZC3H11AO75152 810 aaKnown RBP eCLIP10.06□□□□□ -0.8
PDLIM5-209ENST00000506632 GALTP07902 379 aa10.06□□□□□ -0.8
PDLIM5-209ENST00000506632 CCT6AP40227 531 aaKnown RBP10.06□□□□□ -0.8
PDLIM5-209ENST00000506632 RBM10P98175 930 aaKnown RBP10.06□□□□□ -0.8
PDLIM5-209ENST00000506632 CLUL1Q15846 466 aa10.06□□□□□ -0.8
PDLIM5-209ENST00000506632 IL17AQ16552 155 aa10.06□□□□□ -0.8
PDLIM5-209ENST00000506632 FAM187BQ17R55 369 aa10.06□□□□□ -0.8
PDLIM5-209ENST00000506632 RILPL1Q5EBL4 403 aa10.06□□□□□ -0.8
PDLIM5-209ENST00000506632 PLPP4Q5VZY2 271 aa10.06□□□□□ -0.8
PDLIM5-209ENST00000506632 PADI6Q6TGC4 694 aa10.06□□□□□ -0.8
PDLIM5-209ENST00000506632 ZNF280BQ86YH2 543 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms