RNA–Protein interactions for RNA: ENST00000506575.1

CLDND1-211, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-211ENST00000506575 CNTNAP2Q9UHC6 1331 aa17.24■□□□□ 0.35
CLDND1-211ENST00000506575 CARNS1A5YM72 827 aa17.24■□□□□ 0.35
CLDND1-211ENST00000506575 E9PMD0 336 aa17.24■□□□□ 0.35
CLDND1-211ENST00000506575 EYA4O95677 639 aa17.24■□□□□ 0.35
CLDND1-211ENST00000506575 BMP1P13497 986 aa17.24■□□□□ 0.35
CLDND1-211ENST00000506575 ALDH7A1P49419 539 aaKnown RBP17.24■□□□□ 0.35
CLDND1-211ENST00000506575 KRT17Q04695 432 aa17.24■□□□□ 0.35
CLDND1-211ENST00000506575 PPP2R5AQ15172 486 aa17.24■□□□□ 0.35
CLDND1-211ENST00000506575 UBXN11Q5T124 520 aa17.24■□□□□ 0.35
CLDND1-211ENST00000506575 MRPL10Q7Z7H8 261 aaKnown RBP17.24■□□□□ 0.35
CLDND1-211ENST00000506575 DEPTORQ8TB45 409 aa17.24■□□□□ 0.35
CLDND1-211ENST00000506575 KIFAP3Q92845 792 aa17.24■□□□□ 0.35
CLDND1-211ENST00000506575 CDK5RAP3Q96JB5 506 aa17.24■□□□□ 0.35
CLDND1-211ENST00000506575 CSRNP2Q9H175 543 aa17.24■□□□□ 0.35
CLDND1-211ENST00000506575 IGFLR1Q9H665 355 aa17.24■□□□□ 0.35
CLDND1-211ENST00000506575 RSAD1Q9HA92 442 aa17.24■□□□□ 0.35
CLDND1-211ENST00000506575 UBN1Q9NPG3 1134 aa17.24■□□□□ 0.35
CLDND1-211ENST00000506575 PRMT7Q9NVM4 692 aaPredicted RBP17.24■□□□□ 0.35
CLDND1-211ENST00000506575 SPG21Q9NZD8 308 aa17.24■□□□□ 0.35
CLDND1-211ENST00000506575 MEIS3P2A8K0S8 358 aa17.23■□□□□ 0.35
CLDND1-211ENST00000506575 ZC3H11AO75152 810 aaKnown RBP eCLIP17.23■□□□□ 0.35
CLDND1-211ENST00000506575 OFD1O75665 1012 aa17.23■□□□□ 0.35
CLDND1-211ENST00000506575 ITGA4P13612 1032 aa17.23■□□□□ 0.35
CLDND1-211ENST00000506575 ARF4P18085 180 aaPredicted RBP17.23■□□□□ 0.35
CLDND1-211ENST00000506575 NCLP19338 710 aaKnown RBP17.23■□□□□ 0.35
CLDND1-211ENST00000506575 IRS1P35568 1242 aa17.23■□□□□ 0.35
CLDND1-211ENST00000506575 PBX3P40426 434 aa17.23■□□□□ 0.35
CLDND1-211ENST00000506575 NAMPTP43490 491 aa17.23■□□□□ 0.35
CLDND1-211ENST00000506575 PLCB3Q01970 1234 aa17.23■□□□□ 0.35
CLDND1-211ENST00000506575 HYAL1Q12794 435 aa17.23■□□□□ 0.35
CLDND1-211ENST00000506575 AMHR2Q16671 573 aa17.23■□□□□ 0.35
CLDND1-211ENST00000506575 TMEM132AQ24JP5 1023 aa17.23■□□□□ 0.35
CLDND1-211ENST00000506575 CDCA2Q69YH5 1023 aaPredicted RBP17.23■□□□□ 0.35
CLDND1-211ENST00000506575 HACE1Q8IYU2 909 aa17.23■□□□□ 0.35
CLDND1-211ENST00000506575 MRPS27Q92552 414 aaKnown RBP17.23■□□□□ 0.35
CLDND1-211ENST00000506575 PRIMPOLQ96LW4 560 aa17.23■□□□□ 0.35
CLDND1-211ENST00000506575 UHRF1Q96T88 793 aaPredicted RBP17.23■□□□□ 0.35
CLDND1-211ENST00000506575 EIF2AQ9BY44 585 aaKnown RBP17.23■□□□□ 0.35
CLDND1-211ENST00000506575 NT5C3AQ9H0P0 336 aa17.23■□□□□ 0.35
CLDND1-211ENST00000506575 GBP3Q9H0R5 595 aa17.23■□□□□ 0.35
CLDND1-211ENST00000506575 FOXD4L1Q9NU39 408 aa17.23■□□□□ 0.35
CLDND1-211ENST00000506575 LZTS1Q9Y250 596 aa17.23■□□□□ 0.35
CLDND1-211ENST00000506575 B4GALT5O43286 388 aa17.22■□□□□ 0.35
CLDND1-211ENST00000506575 SYT1P21579 422 aa17.22■□□□□ 0.35
CLDND1-211ENST00000506575 BCAR1P56945 870 aa17.22■□□□□ 0.35
CLDND1-211ENST00000506575 LEXMQ3ZCV2 418 aa17.22■□□□□ 0.35
CLDND1-211ENST00000506575 PDE12Q6L8Q7 609 aaKnown RBP17.22■□□□□ 0.35
CLDND1-211ENST00000506575 SLC27A1Q6PCB7 646 aa17.22■□□□□ 0.35
CLDND1-211ENST00000506575 AGMOQ6ZNB7 445 aa17.22■□□□□ 0.35
CLDND1-211ENST00000506575 KCTD17Q8N5Z5 321 aa17.22■□□□□ 0.35
CLDND1-211ENST00000506575 BSNDQ8WZ55 320 aa17.22■□□□□ 0.35
CLDND1-211ENST00000506575 MMTAG2Q9BU76 263 aaKnown RBP17.22■□□□□ 0.35
CLDND1-211ENST00000506575 ENTPD7Q9NQZ7 604 aa17.22■□□□□ 0.35
CLDND1-211ENST00000506575 TBC1D13Q9NVG8 400 aa17.22■□□□□ 0.35
CLDND1-211ENST00000506575 KANSL3Q9P2N6 904 aa17.22■□□□□ 0.35
CLDND1-211ENST00000506575 IPPQ9Y573 584 aa17.22■□□□□ 0.35
CLDND1-211ENST00000506575 H3BQ06 376 aaPredicted RBP17.21■□□□□ 0.35
CLDND1-211ENST00000506575 LIG1P18858 919 aa17.21■□□□□ 0.35
CLDND1-211ENST00000506575 NRIP1P48552 1158 aa17.21■□□□□ 0.35
CLDND1-211ENST00000506575 COL19A1Q14993 1142 aa17.21■□□□□ 0.35
CLDND1-211ENST00000506575 MAPK6Q16659 721 aa17.21■□□□□ 0.35
CLDND1-211ENST00000506575 PPP4R3CPQ6ZMV5 832 aa17.21■□□□□ 0.35
CLDND1-211ENST00000506575 RBM23Q86U06 439 aaKnown RBP17.21■□□□□ 0.35
CLDND1-211ENST00000506575 SLC39A11Q8N1S5 342 aa17.21■□□□□ 0.35
CLDND1-211ENST00000506575 SMG8Q8ND04 991 aaKnown RBP17.21■□□□□ 0.35
CLDND1-211ENST00000506575 TMEM169Q96HH4 297 aa17.21■□□□□ 0.35
CLDND1-211ENST00000506575 AK8Q96MA6 479 aa17.21■□□□□ 0.35
CLDND1-211ENST00000506575 FAM193BQ96PV7 902 aaPredicted RBP17.21■□□□□ 0.35
CLDND1-211ENST00000506575 APOL6Q9BWW8 343 aa17.21■□□□□ 0.35
CLDND1-211ENST00000506575 POLD4Q9HCU8 107 aa17.21■□□□□ 0.35
CLDND1-211ENST00000506575 A0A1B0GUA9 196 aa17.2■□□□□ 0.34
CLDND1-211ENST00000506575 NT5C1B-RDH14C9J2C7 533 aa17.2■□□□□ 0.34
CLDND1-211ENST00000506575 NPTXRO95502 500 aa17.2■□□□□ 0.34
CLDND1-211ENST00000506575 SSBP05455 408 aaKnown RBP eCLIP17.2■□□□□ 0.34
CLDND1-211ENST00000506575 PRKCBP05771 671 aa17.2■□□□□ 0.34
CLDND1-211ENST00000506575 GTF2F1P35269 517 aaKnown RBP eCLIP17.2■□□□□ 0.34
CLDND1-211ENST00000506575 UBA7P41226 1012 aa17.2■□□□□ 0.34
CLDND1-211ENST00000506575 EFNA5P52803 228 aa17.2■□□□□ 0.34
CLDND1-211ENST00000506575 ERVFC1P60507 584 aa17.2■□□□□ 0.34
CLDND1-211ENST00000506575 PRPF4BQ13523 1007 aaKnown RBP17.2■□□□□ 0.34
CLDND1-211ENST00000506575 SF3A1Q15459 793 aaKnown RBP17.2■□□□□ 0.34
CLDND1-211ENST00000506575 FAM187BQ17R55 369 aa17.2■□□□□ 0.34
CLDND1-211ENST00000506575 PUS10Q3MIT2 529 aaKnown RBP17.2■□□□□ 0.34
CLDND1-211ENST00000506575 HYIQ5T013 277 aa17.2■□□□□ 0.34
CLDND1-211ENST00000506575 PLPP4Q5VZY2 271 aa17.2■□□□□ 0.34
CLDND1-211ENST00000506575 TMC7Q7Z402 723 aa17.2■□□□□ 0.34
CLDND1-211ENST00000506575 ADGRD2Q7Z7M1 963 aa17.2■□□□□ 0.34
CLDND1-211ENST00000506575 CABP7Q86V35 215 aa17.2■□□□□ 0.34
CLDND1-211ENST00000506575 CDR2LQ86X02 465 aaPredicted RBP17.2■□□□□ 0.34
CLDND1-211ENST00000506575 HSCBQ8IWL3 235 aa17.2■□□□□ 0.34
CLDND1-211ENST00000506575 SNX21Q969T3 373 aa17.2■□□□□ 0.34
CLDND1-211ENST00000506575 CALML4Q96GE6 196 aa17.2■□□□□ 0.34
CLDND1-211ENST00000506575 DRC1Q96MC2 740 aa17.2■□□□□ 0.34
CLDND1-211ENST00000506575 PLIN2Q99541 437 aa17.2■□□□□ 0.34
CLDND1-211ENST00000506575 TCF25Q9BQ70 676 aa17.2■□□□□ 0.34
CLDND1-211ENST00000506575 FZD8Q9H461 694 aa17.2■□□□□ 0.34
CLDND1-211ENST00000506575 NRDE2Q9H7Z3 1164 aa17.2■□□□□ 0.34
CLDND1-211ENST00000506575 TLE6Q9H808 572 aa17.2■□□□□ 0.34
CLDND1-211ENST00000506575 NGRNQ9NPE2 291 aaKnown RBP17.2■□□□□ 0.34
CLDND1-211ENST00000506575 FAM50BQ9Y247 325 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms