RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 REEP2Q9BRK0 252 aa20.15■□□□□ 0.82
PDLIM7-216ENST00000506537 EIF2AQ9BY44 585 aaKnown RBP20.15■□□□□ 0.82
PDLIM7-216ENST00000506537 PANK2Q9BZ23 570 aa20.15■□□□□ 0.82
PDLIM7-216ENST00000506537 C2orf40Q9H1Z8 148 aa20.15■□□□□ 0.82
PDLIM7-216ENST00000506537 HCSTQ9UBK5 93 aa20.15■□□□□ 0.82
PDLIM7-216ENST00000506537 USP20Q9Y2K6 914 aa20.15■□□□□ 0.82
PDLIM7-216ENST00000506537 MRPL42Q9Y6G3 142 aaKnown RBP20.15■□□□□ 0.82
PDLIM7-216ENST00000506537 MYH11P35749 1972 aa20.15■□□□□ 0.82
PDLIM7-216ENST00000506537 CNTNAP2Q9UHC6 1331 aa20.14■□□□□ 0.81
PDLIM7-216ENST00000506537 TBKBP1A7MCY6 615 aa20.14■□□□□ 0.81
PDLIM7-216ENST00000506537 PRKCBP05771 671 aa20.14■□□□□ 0.81
PDLIM7-216ENST00000506537 AXLP30530 894 aa20.14■□□□□ 0.81
PDLIM7-216ENST00000506537 ME1P48163 572 aa20.14■□□□□ 0.81
PDLIM7-216ENST00000506537 DMP1Q13316 513 aaPredicted RBP20.14■□□□□ 0.81
PDLIM7-216ENST00000506537 NOTUMQ6P988 496 aa20.14■□□□□ 0.81
PDLIM7-216ENST00000506537 TAS1R3Q7RTX0 852 aa20.14■□□□□ 0.81
PDLIM7-216ENST00000506537 CDR2LQ86X02 465 aaPredicted RBP20.14■□□□□ 0.81
PDLIM7-216ENST00000506537 LEO1Q8WVC0 666 aaPredicted RBP20.14■□□□□ 0.81
PDLIM7-216ENST00000506537 CLP1Q92989 425 aaKnown RBP20.14■□□□□ 0.81
PDLIM7-216ENST00000506537 PRMT7Q9NVM4 692 aaPredicted RBP20.14■□□□□ 0.81
PDLIM7-216ENST00000506537 RNF216Q9NWF9 866 aaPredicted RBP20.14■□□□□ 0.81
PDLIM7-216ENST00000506537 ARHGAP28Q9P2N2 729 aa20.14■□□□□ 0.81
PDLIM7-216ENST00000506537 PCDHB2Q9Y5E7 798 aa20.14■□□□□ 0.81
PDLIM7-216ENST00000506537 TCHHQ07283 1943 aa20.14■□□□□ 0.81
PDLIM7-216ENST00000506537 CCDC169A6NNP5 214 aa20.13■□□□□ 0.81
PDLIM7-216ENST00000506537 LPXNO60711 386 aa20.13■□□□□ 0.81
PDLIM7-216ENST00000506537 ZNF623O75123 536 aa20.13■□□□□ 0.81
PDLIM7-216ENST00000506537 EOMESO95936 686 aa20.13■□□□□ 0.81
PDLIM7-216ENST00000506537 PLS3P13797 630 aa20.13■□□□□ 0.81
PDLIM7-216ENST00000506537 NCLP19338 710 aaKnown RBP20.13■□□□□ 0.81
PDLIM7-216ENST00000506537 RAB27AP51159 221 aa20.13■□□□□ 0.81
PDLIM7-216ENST00000506537 KRT85P78386 507 aa20.13■□□□□ 0.81
PDLIM7-216ENST00000506537 GIT2Q14161 759 aa20.13■□□□□ 0.81
PDLIM7-216ENST00000506537 E2F4Q16254 413 aa20.13■□□□□ 0.81
PDLIM7-216ENST00000506537 LONRF3Q496Y0 759 aa20.13■□□□□ 0.81
PDLIM7-216ENST00000506537 EPC2Q52LR7 807 aa20.13■□□□□ 0.81
PDLIM7-216ENST00000506537 CCDC73Q6ZRK6 1079 aa20.13■□□□□ 0.81
PDLIM7-216ENST00000506537 PDILTQ8N807 584 aa20.13■□□□□ 0.81
PDLIM7-216ENST00000506537 GDPD5Q8WTR4 605 aa20.13■□□□□ 0.81
PDLIM7-216ENST00000506537 CCDC51Q96ER9 411 aa20.13■□□□□ 0.81
PDLIM7-216ENST00000506537 PRIMPOLQ96LW4 560 aa20.13■□□□□ 0.81
PDLIM7-216ENST00000506537 CASD1Q96PB1 797 aa20.13■□□□□ 0.81
PDLIM7-216ENST00000506537 TMEM117Q9H0C3 514 aa20.13■□□□□ 0.81
PDLIM7-216ENST00000506537 C17orf75Q9HAS0 396 aa20.13■□□□□ 0.81
PDLIM7-216ENST00000506537 ODF2LQ9ULJ1 636 aa20.13■□□□□ 0.81
PDLIM7-216ENST00000506537 STXBP5LQ9Y2K9 1186 aa20.13■□□□□ 0.81
PDLIM7-216ENST00000506537 PHLPP2Q6ZVD8 1323 aa20.12■□□□□ 0.81
PDLIM7-216ENST00000506537 LIG1P18858 919 aa20.12■□□□□ 0.81
PDLIM7-216ENST00000506537 STAT6P42226 847 aa20.12■□□□□ 0.81
PDLIM7-216ENST00000506537 ZNF131P52739 623 aa20.12■□□□□ 0.81
PDLIM7-216ENST00000506537 EFNA5P52803 228 aa20.12■□□□□ 0.81
PDLIM7-216ENST00000506537 MAPK6Q16659 721 aa20.12■□□□□ 0.81
PDLIM7-216ENST00000506537 MRPL10Q7Z7H8 261 aaKnown RBP20.12■□□□□ 0.81
PDLIM7-216ENST00000506537 TMEM192Q8IY95 271 aa20.12■□□□□ 0.81
PDLIM7-216ENST00000506537 SMG8Q8ND04 991 aaKnown RBP20.12■□□□□ 0.81
PDLIM7-216ENST00000506537 HELQQ8TDG4 1101 aa20.12■□□□□ 0.81
PDLIM7-216ENST00000506537 KMT5AQ9NQR1 393 aa20.12■□□□□ 0.81
PDLIM7-216ENST00000506537 A0A1B0GUA9 196 aa20.11■□□□□ 0.81
PDLIM7-216ENST00000506537 MYMKA6NI61 221 aa20.11■□□□□ 0.81
PDLIM7-216ENST00000506537 ACKR2O00590 384 aa20.11■□□□□ 0.81
PDLIM7-216ENST00000506537 SLC16A4O15374 487 aa20.11■□□□□ 0.81
PDLIM7-216ENST00000506537 HOXA2O43364 376 aa20.11■□□□□ 0.81
PDLIM7-216ENST00000506537 SKIP12755 728 aa20.11■□□□□ 0.81
PDLIM7-216ENST00000506537 FOSL2P15408 326 aa20.11■□□□□ 0.81
PDLIM7-216ENST00000506537 NUCB2P80303 420 aa20.11■□□□□ 0.81
PDLIM7-216ENST00000506537 NT5DC1Q5TFE4 455 aa20.11■□□□□ 0.81
PDLIM7-216ENST00000506537 RESP18Q5W5W9 173 aa20.11■□□□□ 0.81
PDLIM7-216ENST00000506537 AGMOQ6ZNB7 445 aa20.11■□□□□ 0.81
PDLIM7-216ENST00000506537 LRRC55Q6ZSA7 311 aa20.11■□□□□ 0.81
PDLIM7-216ENST00000506537 FBXO22Q8NEZ5 403 aa20.11■□□□□ 0.81
PDLIM7-216ENST00000506537 SPIRE2Q8WWL2 714 aa20.11■□□□□ 0.81
PDLIM7-216ENST00000506537 SPATA32Q96LK8 384 aa20.11■□□□□ 0.81
PDLIM7-216ENST00000506537 SAMD11Q96NU1 681 aa20.11■□□□□ 0.81
PDLIM7-216ENST00000506537 NTPCRQ9BSD7 190 aaKnown RBP20.11■□□□□ 0.81
PDLIM7-216ENST00000506537 PDZD7Q9H5P4 517 aa20.11■□□□□ 0.81
PDLIM7-216ENST00000506537 IPPQ9Y573 584 aa20.11■□□□□ 0.81
PDLIM7-216ENST00000506537 ATP6V1DQ9Y5K8 247 aa20.11■□□□□ 0.81
PDLIM7-216ENST00000506537 PRUNE2Q8WUY3 3088 aa20.1■□□□□ 0.81
PDLIM7-216ENST00000506537 CTNNB1P35222 781 aa20.1■□□□□ 0.81
PDLIM7-216ENST00000506537 NCBP1Q09161 790 aaKnown RBP20.1■□□□□ 0.81
PDLIM7-216ENST00000506537 PRPF4BQ13523 1007 aaKnown RBP20.1■□□□□ 0.81
PDLIM7-216ENST00000506537 EEF1DP3Q658K8 133 aa20.1■□□□□ 0.81
PDLIM7-216ENST00000506537 SLC27A1Q6PCB7 646 aa20.1■□□□□ 0.81
PDLIM7-216ENST00000506537 TMEM161BQ8NDZ6 487 aa20.1■□□□□ 0.81
PDLIM7-216ENST00000506537 GAS2L1Q99501 681 aaPredicted RBP20.1■□□□□ 0.81
PDLIM7-216ENST00000506537 RNF39Q9H2S5 420 aa20.1■□□□□ 0.81
PDLIM7-216ENST00000506537 NXF3Q9H4D5 531 aaKnown RBP20.1■□□□□ 0.81
PDLIM7-216ENST00000506537 TMEM134Q9H6X4 195 aa20.1■□□□□ 0.81
PDLIM7-216ENST00000506537 CWH43Q9H720 699 aa20.1■□□□□ 0.81
PDLIM7-216ENST00000506537 HES2Q9Y543 173 aa20.1■□□□□ 0.81
PDLIM7-216ENST00000506537 C5orf67F2Z3F1 127 aa20.09■□□□□ 0.81
PDLIM7-216ENST00000506537 FAM13AO94988 1023 aa20.09■□□□□ 0.81
PDLIM7-216ENST00000506537 NPTXRO95502 500 aa20.09■□□□□ 0.81
PDLIM7-216ENST00000506537 KRT18P05783 430 aaKnown RBP20.09■□□□□ 0.81
PDLIM7-216ENST00000506537 BMPR1AP36894 532 aa20.09■□□□□ 0.81
PDLIM7-216ENST00000506537 NCKAP1LP55160 1127 aa20.09■□□□□ 0.81
PDLIM7-216ENST00000506537 SV2BQ7L1I2 683 aa20.09■□□□□ 0.81
PDLIM7-216ENST00000506537 DYMQ7RTS9 669 aa20.09■□□□□ 0.81
PDLIM7-216ENST00000506537 DDX12PQ92771 950 aa20.09■□□□□ 0.81
PDLIM7-216ENST00000506537 DHX58Q96C10 678 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms