RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 TRIM6Q9C030 488 aaPredicted RBP17.19■□□□□ 0.34
MED28-204ENST00000506409 NT5C3AQ9H0P0 336 aa17.19■□□□□ 0.34
MED28-204ENST00000506409 CSRNP2Q9H175 543 aa17.19■□□□□ 0.34
MED28-204ENST00000506409 UBE2ZQ9H832 354 aaPredicted RBP17.19■□□□□ 0.34
MED28-204ENST00000506409 POLD4Q9HCU8 107 aa17.19■□□□□ 0.34
MED28-204ENST00000506409 PRMT7Q9NVM4 692 aaPredicted RBP17.19■□□□□ 0.34
MED28-204ENST00000506409 MTMR6Q9Y217 621 aa17.19■□□□□ 0.34
MED28-204ENST00000506409 BRWD1Q9NSI6 2320 aa17.19■□□□□ 0.34
MED28-204ENST00000506409 STX6O43752 255 aa17.18■□□□□ 0.34
MED28-204ENST00000506409 OFD1O75665 1012 aa17.18■□□□□ 0.34
MED28-204ENST00000506409 HSP90AA1P07900 732 aaKnown RBP17.18■□□□□ 0.34
MED28-204ENST00000506409 NCLP19338 710 aaKnown RBP17.18■□□□□ 0.34
MED28-204ENST00000506409 PBX3P40426 434 aa17.18■□□□□ 0.34
MED28-204ENST00000506409 AGMOQ6ZNB7 445 aa17.18■□□□□ 0.34
MED28-204ENST00000506409 CABP7Q86V35 215 aa17.18■□□□□ 0.34
MED28-204ENST00000506409 KCTD17Q8N5Z5 321 aa17.18■□□□□ 0.34
MED28-204ENST00000506409 URGCPQ8TCY9 931 aa17.18■□□□□ 0.34
MED28-204ENST00000506409 PPP2R3CQ969Q6 453 aa17.18■□□□□ 0.34
MED28-204ENST00000506409 PRIMPOLQ96LW4 560 aa17.18■□□□□ 0.34
MED28-204ENST00000506409 PNMA5Q96PV4 448 aa17.18■□□□□ 0.34
MED28-204ENST00000506409 PLIN2Q99541 437 aa17.18■□□□□ 0.34
MED28-204ENST00000506409 RUSC1Q9BVN2 902 aa17.18■□□□□ 0.34
MED28-204ENST00000506409 EIF2AQ9BY44 585 aaKnown RBP17.18■□□□□ 0.34
MED28-204ENST00000506409 FZD8Q9H461 694 aa17.18■□□□□ 0.34
MED28-204ENST00000506409 RSAD1Q9HA92 442 aa17.18■□□□□ 0.34
MED28-204ENST00000506409 TLR9Q9NR96 1032 aa17.18■□□□□ 0.34
MED28-204ENST00000506409 TBC1D13Q9NVG8 400 aa17.18■□□□□ 0.34
MED28-204ENST00000506409 IPPQ9Y573 584 aa17.18■□□□□ 0.34
MED28-204ENST00000506409 PLXNA4Q9HCM2 1894 aa17.18■□□□□ 0.34
MED28-204ENST00000506409 CNTNAP2Q9UHC6 1331 aa17.18■□□□□ 0.34
MED28-204ENST00000506409 ATG2AQ2TAZ0 1938 aa17.17■□□□□ 0.34
MED28-204ENST00000506409 ZC3H11AO75152 810 aaKnown RBP eCLIP17.17■□□□□ 0.34
MED28-204ENST00000506409 SSBP05455 408 aaKnown RBP eCLIP17.17■□□□□ 0.34
MED28-204ENST00000506409 ITGA4P13612 1032 aa17.17■□□□□ 0.34
MED28-204ENST00000506409 IRS1P35568 1242 aa17.17■□□□□ 0.34
MED28-204ENST00000506409 UBA7P41226 1012 aa17.17■□□□□ 0.34
MED28-204ENST00000506409 ALDH7A1P49419 539 aaKnown RBP17.17■□□□□ 0.34
MED28-204ENST00000506409 KCNQ1P51787 676 aa17.17■□□□□ 0.34
MED28-204ENST00000506409 RNASELQ05823 741 aaKnown RBP17.17■□□□□ 0.34
MED28-204ENST00000506409 MAPK6Q16659 721 aa17.17■□□□□ 0.34
MED28-204ENST00000506409 FAM187BQ17R55 369 aa17.17■□□□□ 0.34
MED28-204ENST00000506409 RINT1Q6NUQ1 792 aa17.17■□□□□ 0.34
MED28-204ENST00000506409 FAM173BQ6P4H8 233 aa17.17■□□□□ 0.34
MED28-204ENST00000506409 SLC27A1Q6PCB7 646 aa17.17■□□□□ 0.34
MED28-204ENST00000506409 PPP4R3CPQ6ZMV5 832 aa17.17■□□□□ 0.34
MED28-204ENST00000506409 EP400NLQ6ZTU2 488 aa17.17■□□□□ 0.34
MED28-204ENST00000506409 SMG8Q8ND04 991 aaKnown RBP17.17■□□□□ 0.34
MED28-204ENST00000506409 MICAL1Q8TDZ2 1067 aa17.17■□□□□ 0.34
MED28-204ENST00000506409 PABPC5Q96DU9 382 aaKnown RBP17.17■□□□□ 0.34
MED28-204ENST00000506409 KIFC3Q9BVG8 833 aa17.17■□□□□ 0.34
MED28-204ENST00000506409 UBN1Q9NPG3 1134 aa17.17■□□□□ 0.34
MED28-204ENST00000506409 SPG21Q9NZD8 308 aa17.17■□□□□ 0.34
MED28-204ENST00000506409 PUF60Q9UHX1 559 aaKnown RBP17.17■□□□□ 0.34
MED28-204ENST00000506409 CLIC4Q9Y696 253 aa17.17■□□□□ 0.34
MED28-204ENST00000506409 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.16■□□□□ 0.34
MED28-204ENST00000506409 A0A1B0GUA9 196 aa17.16■□□□□ 0.34
MED28-204ENST00000506409 SLC26A4O43511 780 aa17.16■□□□□ 0.34
MED28-204ENST00000506409 NCK2O43639 380 aa17.16■□□□□ 0.34
MED28-204ENST00000506409 HIP1RO75146 1068 aa17.16■□□□□ 0.34
MED28-204ENST00000506409 PRKCBP05771 671 aa17.16■□□□□ 0.34
MED28-204ENST00000506409 LIG1P18858 919 aa17.16■□□□□ 0.34
MED28-204ENST00000506409 KCNA5P22460 613 aa17.16■□□□□ 0.34
MED28-204ENST00000506409 LONP1P36776 959 aaKnown RBP17.16■□□□□ 0.34
MED28-204ENST00000506409 EFNA5P52803 228 aa17.16■□□□□ 0.34
MED28-204ENST00000506409 BCAR1P56945 870 aa17.16■□□□□ 0.34
MED28-204ENST00000506409 PLCB3Q01970 1234 aa17.16■□□□□ 0.34
MED28-204ENST00000506409 KRT17Q04695 432 aa17.16■□□□□ 0.34
MED28-204ENST00000506409 GRIN1Q05586 938 aa17.16■□□□□ 0.34
MED28-204ENST00000506409 HYAL1Q12794 435 aa17.16■□□□□ 0.34
MED28-204ENST00000506409 PRPF4BQ13523 1007 aaKnown RBP17.16■□□□□ 0.34
MED28-204ENST00000506409 TMEM132AQ24JP5 1023 aa17.16■□□□□ 0.34
MED28-204ENST00000506409 TMEM119Q4V9L6 283 aa17.16■□□□□ 0.34
MED28-204ENST00000506409 C1orf186Q6ZWK4 172 aa17.16■□□□□ 0.34
MED28-204ENST00000506409 CDR2LQ86X02 465 aaPredicted RBP17.16■□□□□ 0.34
MED28-204ENST00000506409 HACE1Q8IYU2 909 aa17.16■□□□□ 0.34
MED28-204ENST00000506409 MRPS27Q92552 414 aaKnown RBP17.16■□□□□ 0.34
MED28-204ENST00000506409 CALML4Q96GE6 196 aa17.16■□□□□ 0.34
MED28-204ENST00000506409 DRC1Q96MC2 740 aa17.16■□□□□ 0.34
MED28-204ENST00000506409 CCDC113Q9H0I3 377 aa17.16■□□□□ 0.34
MED28-204ENST00000506409 ZSCAN16Q9H4T2 348 aaPredicted RBP17.16■□□□□ 0.34
MED28-204ENST00000506409 LZTS1Q9Y250 596 aa17.16■□□□□ 0.34
MED28-204ENST00000506409 HES2Q9Y543 173 aa17.16■□□□□ 0.34
MED28-204ENST00000506409 CUL9Q8IWT3 2517 aa17.16■□□□□ 0.34
MED28-204ENST00000506409 CARNS1A5YM72 827 aa17.15■□□□□ 0.34
MED28-204ENST00000506409 CCDC169A6NNP5 214 aa17.15■□□□□ 0.34
MED28-204ENST00000506409 NPTXRO95502 500 aa17.15■□□□□ 0.34
MED28-204ENST00000506409 PLA2G4BP0C869 781 aa17.15■□□□□ 0.34
MED28-204ENST00000506409 GUCY2CP25092 1073 aa17.15■□□□□ 0.34
MED28-204ENST00000506409 PEX3P56589 373 aa17.15■□□□□ 0.34
MED28-204ENST00000506409 CEBPZQ03701 1054 aaKnown RBP17.15■□□□□ 0.34
MED28-204ENST00000506409 DMP1Q13316 513 aaPredicted RBP17.15■□□□□ 0.34
MED28-204ENST00000506409 COL19A1Q14993 1142 aa17.15■□□□□ 0.34
MED28-204ENST00000506409 PTPAQ15257 358 aa17.15■□□□□ 0.34
MED28-204ENST00000506409 DAW1Q8N136 415 aa17.15■□□□□ 0.34
MED28-204ENST00000506409 SLC39A11Q8N1S5 342 aa17.15■□□□□ 0.34
MED28-204ENST00000506409 SYT2Q8N9I0 419 aaPredicted RBP17.15■□□□□ 0.34
MED28-204ENST00000506409 RASSF8Q8NHQ8 419 aa17.15■□□□□ 0.34
MED28-204ENST00000506409 TIPINQ9BVW5 301 aa17.15■□□□□ 0.34
MED28-204ENST00000506409 APOL6Q9BWW8 343 aa17.15■□□□□ 0.34
MED28-204ENST00000506409 GBP3Q9H0R5 595 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms