RNA–Protein interactions for RNA: ENST00000505831.1

SUDS3P1-201, Transcript of SDS3 homolog, SIN3A corepressor complex component pseudogene 1, humanhuman

BASIC

Gene SUDS3P1, Length 966 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3P1-201ENST00000505831 ZC3H11AO75152 810 aaKnown RBP eCLIP24.74■■□□□ 1.55
SUDS3P1-201ENST00000505831 SRGAP2BP0DMP2 458 aa24.74■■□□□ 1.55
SUDS3P1-201ENST00000505831 AFF1P51825 1210 aaKnown RBP24.74■■□□□ 1.55
SUDS3P1-201ENST00000505831 PTENP60484 403 aa24.74■■□□□ 1.55
SUDS3P1-201ENST00000505831 MXD4Q14582 209 aaPredicted RBP24.74■■□□□ 1.55
SUDS3P1-201ENST00000505831 DDX53Q86TM3 631 aaKnown RBP24.74■■□□□ 1.55
SUDS3P1-201ENST00000505831 ZNF280BQ86YH2 543 aa24.74■■□□□ 1.55
SUDS3P1-201ENST00000505831 BCL7CQ8WUZ0 217 aaPredicted RBP24.74■■□□□ 1.55
SUDS3P1-201ENST00000505831 TMEM169Q96HH4 297 aa24.74■■□□□ 1.55
SUDS3P1-201ENST00000505831 ZBP1Q9H171 429 aa24.74■■□□□ 1.55
SUDS3P1-201ENST00000505831 DNAJB4Q9UDY4 337 aa24.74■■□□□ 1.55
SUDS3P1-201ENST00000505831 HCFC2Q9Y5Z7 792 aa24.74■■□□□ 1.55
SUDS3P1-201ENST00000505831 NEMFO60524 1076 aa24.73■■□□□ 1.55
SUDS3P1-201ENST00000505831 CXCL14O95715 111 aa24.73■■□□□ 1.55
SUDS3P1-201ENST00000505831 XRCC6P12956 609 aaKnown RBP eCLIP24.73■■□□□ 1.55
SUDS3P1-201ENST00000505831 PCBP1Q15365 356 aaKnown RBP eCLIP24.73■■□□□ 1.55
SUDS3P1-201ENST00000505831 VPS52Q8N1B4 723 aa24.73■■□□□ 1.55
SUDS3P1-201ENST00000505831 DENND4AQ7Z401 1863 aa24.72■■□□□ 1.55
SUDS3P1-201ENST00000505831 DDHD2O94830 711 aa24.72■■□□□ 1.55
SUDS3P1-201ENST00000505831 CTSAP10619 480 aa24.72■■□□□ 1.55
SUDS3P1-201ENST00000505831 NCLP19338 710 aaKnown RBP24.72■■□□□ 1.55
SUDS3P1-201ENST00000505831 ARL2P36404 184 aa24.72■■□□□ 1.55
SUDS3P1-201ENST00000505831 TXKP42681 527 aa24.72■■□□□ 1.55
SUDS3P1-201ENST00000505831 LLGL2Q6P1M3 1020 aa24.72■■□□□ 1.55
SUDS3P1-201ENST00000505831 CASP10Q92851 521 aa24.72■■□□□ 1.55
SUDS3P1-201ENST00000505831 VN1R3Q9BXE9 311 aa24.72■■□□□ 1.55
SUDS3P1-201ENST00000505831 TMEM60Q9H2L4 133 aa24.72■■□□□ 1.55
SUDS3P1-201ENST00000505831 INPP5FQ9Y2H2 1132 aa24.72■■□□□ 1.55
SUDS3P1-201ENST00000505831 PLXNA3P51805 1871 aa24.71■■□□□ 1.55
SUDS3P1-201ENST00000505831 CNTNAP2Q9UHC6 1331 aa24.71■■□□□ 1.55
SUDS3P1-201ENST00000505831 DGAT1O75907 488 aa24.71■■□□□ 1.55
SUDS3P1-201ENST00000505831 SPATA31C1P0DKV0 1188 aa24.71■■□□□ 1.55
SUDS3P1-201ENST00000505831 SLC11A1P49279 550 aa24.71■■□□□ 1.55
SUDS3P1-201ENST00000505831 RARRES1P49788 294 aa24.71■■□□□ 1.55
SUDS3P1-201ENST00000505831 TRIM29Q14134 588 aa24.71■■□□□ 1.55
SUDS3P1-201ENST00000505831 HFE2Q6ZVN8 426 aa24.71■■□□□ 1.55
SUDS3P1-201ENST00000505831 SMG8Q8ND04 991 aaKnown RBP24.71■■□□□ 1.55
SUDS3P1-201ENST00000505831 RPGRIP1Q96KN7 1286 aa24.71■■□□□ 1.55
SUDS3P1-201ENST00000505831 RSAD1Q9HA92 442 aa24.71■■□□□ 1.55
SUDS3P1-201ENST00000505831 KANSL3Q9P2N6 904 aa24.71■■□□□ 1.55
SUDS3P1-201ENST00000505831 LIMCH1Q9UPQ0 1083 aa24.71■■□□□ 1.55
SUDS3P1-201ENST00000505831 INPPL1O15357 1258 aa24.7■■□□□ 1.54
SUDS3P1-201ENST00000505831 TSPAN1O60635 241 aa24.7■■□□□ 1.54
SUDS3P1-201ENST00000505831 AXLP30530 894 aa24.7■■□□□ 1.54
SUDS3P1-201ENST00000505831 RNASELQ05823 741 aaKnown RBP24.7■■□□□ 1.54
SUDS3P1-201ENST00000505831 AMHR2Q16671 573 aa24.7■■□□□ 1.54
SUDS3P1-201ENST00000505831 BMP8AQ7Z5Y6 402 aa24.7■■□□□ 1.54
SUDS3P1-201ENST00000505831 CNNM3Q8NE01 707 aa24.7■■□□□ 1.54
SUDS3P1-201ENST00000505831 ASAP3Q8TDY4 903 aa24.7■■□□□ 1.54
SUDS3P1-201ENST00000505831 SLC22A17Q8WUG5 538 aa24.7■■□□□ 1.54
SUDS3P1-201ENST00000505831 NFKBIZQ9BYH8 718 aa24.7■■□□□ 1.54
SUDS3P1-201ENST00000505831 KMT2EQ8IZD2 1858 aa24.7■■□□□ 1.54
SUDS3P1-201ENST00000505831 HOXD11P31277 338 aaPredicted RBP24.69■■□□□ 1.54
SUDS3P1-201ENST00000505831 FOSBP53539 338 aa24.69■■□□□ 1.54
SUDS3P1-201ENST00000505831 CAPSQ13938 189 aa24.69■■□□□ 1.54
SUDS3P1-201ENST00000505831 GIT2Q14161 759 aa24.69■■□□□ 1.54
SUDS3P1-201ENST00000505831 BMS1Q14692 1282 aaKnown RBP24.69■■□□□ 1.54
SUDS3P1-201ENST00000505831 AUTS2Q8WXX7 1259 aa24.69■■□□□ 1.54
SUDS3P1-201ENST00000505831 TMEM175Q9BSA9 504 aa24.69■■□□□ 1.54
SUDS3P1-201ENST00000505831 APOL5Q9BWW9 433 aa24.69■■□□□ 1.54
SUDS3P1-201ENST00000505831 ADAM7Q9H2U9 754 aa24.69■■□□□ 1.54
SUDS3P1-201ENST00000505831 A0A087WWV3 80 aa24.68■■□□□ 1.54
SUDS3P1-201ENST00000505831 POTEMA6NI47 508 aa24.68■■□□□ 1.54
SUDS3P1-201ENST00000505831 ALDH2P05091 517 aa24.68■■□□□ 1.54
SUDS3P1-201ENST00000505831 GLRA2P23416 452 aa24.68■■□□□ 1.54
SUDS3P1-201ENST00000505831 ZXDAP98168 799 aa24.68■■□□□ 1.54
SUDS3P1-201ENST00000505831 MBTD1Q05BQ5 628 aa24.68■■□□□ 1.54
SUDS3P1-201ENST00000505831 ITIH3Q06033 890 aa24.68■■□□□ 1.54
SUDS3P1-201ENST00000505831 TFDP1Q14186 410 aa24.68■■□□□ 1.54
SUDS3P1-201ENST00000505831 TPRNQ4KMQ1 711 aa24.68■■□□□ 1.54
SUDS3P1-201ENST00000505831 TRIM67Q6ZTA4 783 aa24.68■■□□□ 1.54
SUDS3P1-201ENST00000505831 URGCPQ8TCY9 931 aa24.68■■□□□ 1.54
SUDS3P1-201ENST00000505831 PIGOQ8TEQ8 1089 aa24.68■■□□□ 1.54
SUDS3P1-201ENST00000505831 CCDC51Q96ER9 411 aa24.68■■□□□ 1.54
SUDS3P1-201ENST00000505831 LLPHQ9BRT6 129 aaKnown RBP24.68■■□□□ 1.54
SUDS3P1-201ENST00000505831 EIF2AQ9BY44 585 aaKnown RBP24.68■■□□□ 1.54
SUDS3P1-201ENST00000505831 GBP3Q9H0R5 595 aa24.68■■□□□ 1.54
SUDS3P1-201ENST00000505831 UBN1Q9NPG3 1134 aa24.68■■□□□ 1.54
SUDS3P1-201ENST00000505831 LILRB3O75022 631 aa24.67■■□□□ 1.54
SUDS3P1-201ENST00000505831 ERLIN2O94905 339 aa24.67■■□□□ 1.54
SUDS3P1-201ENST00000505831 GUCY1B3Q02153 619 aa24.67■■□□□ 1.54
SUDS3P1-201ENST00000505831 CATSPER3Q86XQ3 398 aa24.67■■□□□ 1.54
SUDS3P1-201ENST00000505831 KIF2CQ99661 725 aa24.67■■□□□ 1.54
SUDS3P1-201ENST00000505831 RNF39Q9H2S5 420 aa24.67■■□□□ 1.54
SUDS3P1-201ENST00000505831 CDH22Q9UJ99 828 aa24.67■■□□□ 1.54
SUDS3P1-201ENST00000505831 IPPQ9Y573 584 aa24.67■■□□□ 1.54
SUDS3P1-201ENST00000505831 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.66■■□□□ 1.54
SUDS3P1-201ENST00000505831 NRP1O14786 923 aa24.66■■□□□ 1.54
SUDS3P1-201ENST00000505831 EFEMP2O95967 443 aa24.66■■□□□ 1.54
SUDS3P1-201ENST00000505831 ITGA4P13612 1032 aa24.66■■□□□ 1.54
SUDS3P1-201ENST00000505831 ARF4P18085 180 aaPredicted RBP24.66■■□□□ 1.54
SUDS3P1-201ENST00000505831 MCM7P33993 719 aa24.66■■□□□ 1.54
SUDS3P1-201ENST00000505831 NOTUMQ6P988 496 aa24.66■■□□□ 1.54
SUDS3P1-201ENST00000505831 CPB2Q96IY4 423 aa24.66■■□□□ 1.54
SUDS3P1-201ENST00000505831 CSRNP2Q9H175 543 aa24.66■■□□□ 1.54
SUDS3P1-201ENST00000505831 KCNH6Q9H252 994 aa24.66■■□□□ 1.54
SUDS3P1-201ENST00000505831 TUFT1Q9NNX1 390 aa24.66■■□□□ 1.54
SUDS3P1-201ENST00000505831 MIOSQ9NXC5 875 aa24.66■■□□□ 1.54
SUDS3P1-201ENST00000505831 STK39Q9UEW8 545 aa24.66■■□□□ 1.54
SUDS3P1-201ENST00000505831 FAN1Q9Y2M0 1017 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms