RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 UIMC1Q96RL1 719 aa5.33□□□□□ -1.56
CHD1-203ENST00000505657 MENTQ9BUN1 341 aa5.33□□□□□ -1.56
CHD1-203ENST00000505657 ASPSCR1Q9BZE9 553 aa5.33□□□□□ -1.56
CHD1-203ENST00000505657 DNAJC28Q9NX36 388 aa5.33□□□□□ -1.56
CHD1-203ENST00000505657 ST6GALNAC2Q9UJ37 374 aa5.33□□□□□ -1.56
CHD1-203ENST00000505657 CNOT11Q9UKZ1 510 aaKnown RBP5.33□□□□□ -1.56
CHD1-203ENST00000505657 ZFR2Q9UPR6 939 aaKnown RBP5.33□□□□□ -1.56
CHD1-203ENST00000505657 hCG_2014768A0A024R1R8 64 aa5.32□□□□□ -1.56
CHD1-203ENST00000505657 PATE3B3GLJ2 98 aa5.32□□□□□ -1.56
CHD1-203ENST00000505657 ALG1L2C9J202 215 aa5.32□□□□□ -1.56
CHD1-203ENST00000505657 DAPK3O43293 454 aa5.32□□□□□ -1.56
CHD1-203ENST00000505657 NRP2O60462 931 aa5.32□□□□□ -1.56
CHD1-203ENST00000505657 ALDH1A2O94788 518 aa5.32□□□□□ -1.56
CHD1-203ENST00000505657 CFBP00751 764 aa5.32□□□□□ -1.56
CHD1-203ENST00000505657 VSIG10L2P0DP72 767 aa5.32□□□□□ -1.56
CHD1-203ENST00000505657 XPAP23025 273 aaPredicted RBP5.32□□□□□ -1.56
CHD1-203ENST00000505657 MAGEA10P43363 369 aaPredicted RBP5.32□□□□□ -1.56
CHD1-203ENST00000505657 KIR2DL3P43628 341 aa5.32□□□□□ -1.56
CHD1-203ENST00000505657 KRTAP1-1Q07627 177 aa5.32□□□□□ -1.56
CHD1-203ENST00000505657 MAN2A1Q16706 1144 aa5.32□□□□□ -1.56
CHD1-203ENST00000505657 LMBR1LQ6UX01 489 aa5.32□□□□□ -1.56
CHD1-203ENST00000505657 GLB1L2Q8IW92 636 aa5.32□□□□□ -1.56
CHD1-203ENST00000505657 C1orf162Q8NEQ5 155 aaPredicted RBP5.32□□□□□ -1.56
CHD1-203ENST00000505657 DNERQ8NFT8 737 aa5.32□□□□□ -1.56
CHD1-203ENST00000505657 STAG1Q8WVM7 1258 aa5.32□□□□□ -1.56
CHD1-203ENST00000505657 RSAD2Q8WXG1 361 aa5.32□□□□□ -1.56
CHD1-203ENST00000505657 TMEM176AQ96HP8 235 aa5.32□□□□□ -1.56
CHD1-203ENST00000505657 RAX2Q96IS3 184 aa5.32□□□□□ -1.56
CHD1-203ENST00000505657 LOXL4Q96JB6 756 aa5.32□□□□□ -1.56
CHD1-203ENST00000505657 SLC2A13Q96QE2 648 aa5.32□□□□□ -1.56
CHD1-203ENST00000505657 SMAD5Q99717 465 aaKnown RBP5.32□□□□□ -1.56
CHD1-203ENST00000505657 C14orf93Q9H972 538 aaKnown RBP5.32□□□□□ -1.56
CHD1-203ENST00000505657 IFT122Q9HBG6 1241 aa5.32□□□□□ -1.56
CHD1-203ENST00000505657 CD248Q9HCU0 757 aa5.32□□□□□ -1.56
CHD1-203ENST00000505657 HOMER2Q9NSB8 354 aa5.32□□□□□ -1.56
CHD1-203ENST00000505657 TNKSO95271 1327 aa5.31□□□□□ -1.56
CHD1-203ENST00000505657 MATN3O15232 486 aa5.31□□□□□ -1.56
CHD1-203ENST00000505657 PCDHGA12O60330 932 aa5.31□□□□□ -1.56
CHD1-203ENST00000505657 MYBL2P10244 700 aa5.31□□□□□ -1.56
CHD1-203ENST00000505657 NRG3P56975 720 aa5.31□□□□□ -1.56
CHD1-203ENST00000505657 ADAM17P78536 824 aa5.31□□□□□ -1.56
CHD1-203ENST00000505657 PCBP2Q15366 365 aaKnown RBP eCLIP5.31□□□□□ -1.56
CHD1-203ENST00000505657 UBE3CQ15386 1083 aa5.31□□□□□ -1.56
CHD1-203ENST00000505657 SLC16A11Q8NCK7 471 aa5.31□□□□□ -1.56
CHD1-203ENST00000505657 Q8TCH9 128 aa5.31□□□□□ -1.56
CHD1-203ENST00000505657 KRTAP3-1Q9BYR8 98 aa5.31□□□□□ -1.56
CHD1-203ENST00000505657 DMRT3Q9NQL9 472 aa5.31□□□□□ -1.56
CHD1-203ENST00000505657 PCDHGA9Q9Y5G4 932 aaKnown RBP5.31□□□□□ -1.56
CHD1-203ENST00000505657 PCDHGA8Q9Y5G5 932 aa5.31□□□□□ -1.56
CHD1-203ENST00000505657 PCDHGA7Q9Y5G6 932 aa5.31□□□□□ -1.56
CHD1-203ENST00000505657 PCDHGA6Q9Y5G7 932 aa5.31□□□□□ -1.56
CHD1-203ENST00000505657 PCDHGA3Q9Y5H0 932 aa5.31□□□□□ -1.56
CHD1-203ENST00000505657 PCDHGA2Q9Y5H1 932 aa5.31□□□□□ -1.56
CHD1-203ENST00000505657 UBE2QL1A1L167 161 aa5.3□□□□□ -1.56
CHD1-203ENST00000505657 PMS2P1A4D2B8 440 aa5.3□□□□□ -1.56
CHD1-203ENST00000505657 TRIM75PA6NK02 468 aa5.3□□□□□ -1.56
CHD1-203ENST00000505657 PRAMEF4O60810 478 aa5.3□□□□□ -1.56
CHD1-203ENST00000505657 RAD17O75943 681 aa5.3□□□□□ -1.56
CHD1-203ENST00000505657 STC2O76061 302 aa5.3□□□□□ -1.56
CHD1-203ENST00000505657 FSHBP01225 129 aa5.3□□□□□ -1.56
CHD1-203ENST00000505657 JUNP05412 331 aaKnown RBP5.3□□□□□ -1.56
CHD1-203ENST00000505657 LTA4HP09960 611 aaKnown RBP5.3□□□□□ -1.56
CHD1-203ENST00000505657 AGXTP21549 392 aa5.3□□□□□ -1.56
CHD1-203ENST00000505657 IBSPP21815 317 aaPredicted RBP5.3□□□□□ -1.56
CHD1-203ENST00000505657 CTSSP25774 331 aa5.3□□□□□ -1.56
CHD1-203ENST00000505657 FOXL1Q12952 345 aa5.3□□□□□ -1.56
CHD1-203ENST00000505657 ADRM1Q16186 407 aa5.3□□□□□ -1.56
CHD1-203ENST00000505657 GAGE13Q4V321 117 aa5.3□□□□□ -1.56
CHD1-203ENST00000505657 KRT40Q6A162 431 aa5.3□□□□□ -1.56
CHD1-203ENST00000505657 PGM2L1Q6PCE3 622 aa5.3□□□□□ -1.56
CHD1-203ENST00000505657 TAS1R1Q7RTX1 841 aa5.3□□□□□ -1.56
CHD1-203ENST00000505657 LILRA3Q8N6C8 439 aaPredicted RBP5.3□□□□□ -1.56
CHD1-203ENST00000505657 GLB1L3Q8NCI6 653 aaPredicted RBP5.3□□□□□ -1.56
CHD1-203ENST00000505657 C8orf49Q96NF6 230 aa5.3□□□□□ -1.56
CHD1-203ENST00000505657 IL23AQ9NPF7 189 aa5.3□□□□□ -1.56
CHD1-203ENST00000505657 TLR9Q9NR96 1032 aa5.3□□□□□ -1.56
CHD1-203ENST00000505657 ZNF277Q9NRM2 450 aaPredicted RBP5.3□□□□□ -1.56
CHD1-203ENST00000505657 NCDNQ9UBB6 729 aa5.3□□□□□ -1.56
CHD1-203ENST00000505657 SCOCQ9UIL1 159 aa5.3□□□□□ -1.56
CHD1-203ENST00000505657 GPR45Q9Y5Y3 372 aa5.3□□□□□ -1.56
CHD1-203ENST00000505657 SLC30A1Q9Y6M5 507 aa5.3□□□□□ -1.56
CHD1-203ENST00000505657 A0A1W2PRX2 142 aa5.29□□□□□ -1.56
CHD1-203ENST00000505657 OVOL3O00110 214 aa5.29□□□□□ -1.56
CHD1-203ENST00000505657 MTSS1O43312 755 aa5.29□□□□□ -1.56
CHD1-203ENST00000505657 MSX2P35548 267 aaPredicted RBP5.29□□□□□ -1.56
CHD1-203ENST00000505657 CASRP41180 1078 aa5.29□□□□□ -1.56
CHD1-203ENST00000505657 PPP3CAQ08209 521 aa5.29□□□□□ -1.56
CHD1-203ENST00000505657 CLUL1Q15846 466 aa5.29□□□□□ -1.56
CHD1-203ENST00000505657 ZNF585AQ6P3V2 769 aa5.29□□□□□ -1.56
CHD1-203ENST00000505657 Q6ZSN1 163 aa5.29□□□□□ -1.56
CHD1-203ENST00000505657 JADE3Q92613 823 aa5.29□□□□□ -1.56
CHD1-203ENST00000505657 FUBP3Q96I24 572 aaKnown RBP eCLIP5.29□□□□□ -1.56
CHD1-203ENST00000505657 FAXDC2Q96IV6 333 aa5.29□□□□□ -1.56
CHD1-203ENST00000505657 SAMD11Q96NU1 681 aa5.29□□□□□ -1.56
CHD1-203ENST00000505657 ACE2Q9BYF1 805 aaPredicted RBP5.29□□□□□ -1.56
CHD1-203ENST00000505657 ENKD1Q9H0I2 346 aa5.29□□□□□ -1.56
CHD1-203ENST00000505657 PLA2G3Q9NZ20 509 aa5.29□□□□□ -1.56
CHD1-203ENST00000505657 TUBD1Q9UJT1 453 aa5.29□□□□□ -1.56
CHD1-203ENST00000505657 ADCY6O43306 1168 aa5.28□□□□□ -1.56
CHD1-203ENST00000505657 ZNF623O75123 536 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms