RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 SPATA31D3P0C874 917 aa7.75□□□□□ -1.17
NPIPB3-203ENST00000504841 SRFP11831 508 aa7.75□□□□□ -1.17
NPIPB3-203ENST00000504841 RAB27AP51159 221 aa7.75□□□□□ -1.17
NPIPB3-203ENST00000504841 AFF1P51825 1210 aaKnown RBP7.75□□□□□ -1.17
NPIPB3-203ENST00000504841 JAK3P52333 1124 aa7.75□□□□□ -1.17
NPIPB3-203ENST00000504841 FGD1P98174 961 aa7.75□□□□□ -1.17
NPIPB3-203ENST00000504841 PUM1Q14671 1186 aaKnown RBP eCLIP7.75□□□□□ -1.17
NPIPB3-203ENST00000504841 PFKFB3Q16875 520 aaPredicted RBP7.75□□□□□ -1.17
NPIPB3-203ENST00000504841 LRCH2Q5VUJ6 765 aa7.75□□□□□ -1.17
NPIPB3-203ENST00000504841 ZC3H14Q6PJT7 736 aaKnown RBP7.75□□□□□ -1.17
NPIPB3-203ENST00000504841 SPATA31D4Q6ZUB0 917 aa7.75□□□□□ -1.17
NPIPB3-203ENST00000504841 GLYCTKQ8IVS8 523 aa7.75□□□□□ -1.17
NPIPB3-203ENST00000504841 KSR1Q8IVT5 923 aa7.75□□□□□ -1.17
NPIPB3-203ENST00000504841 TEX2Q8IWB9 1127 aa7.75□□□□□ -1.17
NPIPB3-203ENST00000504841 ZNF710Q8N1W2 664 aa7.75□□□□□ -1.17
NPIPB3-203ENST00000504841 SLC44A3Q8N4M1 653 aa7.75□□□□□ -1.17
NPIPB3-203ENST00000504841 SMG7Q92540 1137 aaKnown RBP7.75□□□□□ -1.17
NPIPB3-203ENST00000504841 RUBCNQ92622 972 aa7.75□□□□□ -1.17
NPIPB3-203ENST00000504841 PGBD4Q96DM1 585 aa7.75□□□□□ -1.17
NPIPB3-203ENST00000504841 ESYT1Q9BSJ8 1104 aa7.75□□□□□ -1.17
NPIPB3-203ENST00000504841 FOXQ1Q9C009 403 aa7.75□□□□□ -1.17
NPIPB3-203ENST00000504841 SEMA4AQ9H3S1 761 aa7.75□□□□□ -1.17
NPIPB3-203ENST00000504841 UNC45AQ9H3U1 944 aa7.75□□□□□ -1.17
NPIPB3-203ENST00000504841 RSAD1Q9HA92 442 aa7.75□□□□□ -1.17
NPIPB3-203ENST00000504841 C6orf50Q9HD87 102 aa7.75□□□□□ -1.17
NPIPB3-203ENST00000504841 WDR6Q9NNW5 1121 aaKnown RBP7.75□□□□□ -1.17
NPIPB3-203ENST00000504841 ARHGEF3Q9NR81 526 aa7.75□□□□□ -1.17
NPIPB3-203ENST00000504841 SUCLA2Q9P2R7 463 aaPredicted RBP7.75□□□□□ -1.17
NPIPB3-203ENST00000504841 WNT16Q9UBV4 365 aa7.75□□□□□ -1.17
NPIPB3-203ENST00000504841 FAN1Q9Y2M0 1017 aa7.75□□□□□ -1.17
NPIPB3-203ENST00000504841 PCDHB2Q9Y5E7 798 aa7.75□□□□□ -1.17
NPIPB3-203ENST00000504841 GVINP1Q7Z2Y8 2422 aa7.75□□□□□ -1.17
NPIPB3-203ENST00000504841 CFAP54Q96N23 3096 aa7.75□□□□□ -1.17
NPIPB3-203ENST00000504841 ESYT2A0FGR8 921 aa7.74□□□□□ -1.17
NPIPB3-203ENST00000504841 POTEMA6NI47 508 aa7.74□□□□□ -1.17
NPIPB3-203ENST00000504841 DDX11L8A8MPP1 907 aa7.74□□□□□ -1.17
NPIPB3-203ENST00000504841 NRP1O14786 923 aa7.74□□□□□ -1.17
NPIPB3-203ENST00000504841 MSH4O15457 936 aa7.74□□□□□ -1.17
NPIPB3-203ENST00000504841 TEX28O15482 410 aa7.74□□□□□ -1.17
NPIPB3-203ENST00000504841 LRRN2O75325 713 aa7.74□□□□□ -1.17
NPIPB3-203ENST00000504841 KRT37O76014 449 aa7.74□□□□□ -1.17
NPIPB3-203ENST00000504841 ALDH2P05091 517 aa7.74□□□□□ -1.17
NPIPB3-203ENST00000504841 SP9P0CG40 484 aa7.74□□□□□ -1.17
NPIPB3-203ENST00000504841 SFNP31947 248 aa7.74□□□□□ -1.17
NPIPB3-203ENST00000504841 OR1G1P47890 313 aa7.74□□□□□ -1.17
NPIPB3-203ENST00000504841 GLUD2P49448 558 aa7.74□□□□□ -1.17
NPIPB3-203ENST00000504841 DNM2P50570 870 aa7.74□□□□□ -1.17
NPIPB3-203ENST00000504841 NECTIN1Q15223 517 aa7.74□□□□□ -1.17
NPIPB3-203ENST00000504841 TARBP2Q15633 366 aaKnown RBP7.74□□□□□ -1.17
NPIPB3-203ENST00000504841 RSPO4Q2I0M5 234 aaPredicted RBP7.74□□□□□ -1.17
NPIPB3-203ENST00000504841 PLA2G4FQ68DD2 849 aa7.74□□□□□ -1.17
NPIPB3-203ENST00000504841 ELMSAN1Q6PJG2 1045 aa7.74□□□□□ -1.17
NPIPB3-203ENST00000504841 POTEGQ6S5H5 508 aa7.74□□□□□ -1.17
NPIPB3-203ENST00000504841 AGMOQ6ZNB7 445 aa7.74□□□□□ -1.17
NPIPB3-203ENST00000504841 MIER3Q7Z3K6 550 aa7.74□□□□□ -1.17
NPIPB3-203ENST00000504841 ZNF410Q86VK4 478 aa7.74□□□□□ -1.17
NPIPB3-203ENST00000504841 PALB2Q86YC2 1186 aa7.74□□□□□ -1.17
NPIPB3-203ENST00000504841 C1orf210Q8IVY1 113 aa7.74□□□□□ -1.17
NPIPB3-203ENST00000504841 CCDC12Q8WUD4 166 aaPredicted RBP7.74□□□□□ -1.17
NPIPB3-203ENST00000504841 RSPH1Q8WYR4 309 aa7.74□□□□□ -1.17
NPIPB3-203ENST00000504841 LENG9Q96B70 501 aa7.74□□□□□ -1.17
NPIPB3-203ENST00000504841 CCDC136Q96JN2 1154 aa7.74□□□□□ -1.17
NPIPB3-203ENST00000504841 YTHDC1Q96MU7 727 aaKnown RBP7.74□□□□□ -1.17
NPIPB3-203ENST00000504841 CNTNAP3BQ96NU0 1288 aa7.74□□□□□ -1.17
NPIPB3-203ENST00000504841 RPS6KC1Q96S38 1066 aa7.74□□□□□ -1.17
NPIPB3-203ENST00000504841 TMEM175Q9BSA9 504 aa7.74□□□□□ -1.17
NPIPB3-203ENST00000504841 HERC2P3Q9BVR0 1158 aa7.74□□□□□ -1.17
NPIPB3-203ENST00000504841 CNTNAP3Q9BZ76 1288 aa7.74□□□□□ -1.17
NPIPB3-203ENST00000504841 INO80BQ9C086 356 aaPredicted RBP7.74□□□□□ -1.17
NPIPB3-203ENST00000504841 ZMYND12Q9H0C1 365 aa7.74□□□□□ -1.17
NPIPB3-203ENST00000504841 FAM217BQ9NTX9 383 aaPredicted RBP7.74□□□□□ -1.17
NPIPB3-203ENST00000504841 AGPAT5Q9NUQ2 364 aa7.74□□□□□ -1.17
NPIPB3-203ENST00000504841 NCDNQ9UBB6 729 aa7.74□□□□□ -1.17
NPIPB3-203ENST00000504841 SIT1Q9Y3P8 196 aa7.74□□□□□ -1.17
NPIPB3-203ENST00000504841 WDR81Q562E7 1941 aa7.74□□□□□ -1.17
NPIPB3-203ENST00000504841 F8W810 466 aa7.73□□□□□ -1.17
NPIPB3-203ENST00000504841 KINO60870 393 aaKnown RBP7.73□□□□□ -1.17
NPIPB3-203ENST00000504841 SOD2P04179 222 aa7.73□□□□□ -1.17
NPIPB3-203ENST00000504841 GNA11P29992 359 aa7.73□□□□□ -1.17
NPIPB3-203ENST00000504841 CIITAP33076 1130 aa7.73□□□□□ -1.17
NPIPB3-203ENST00000504841 ADD1P35611 737 aaKnown RBP7.73□□□□□ -1.17
NPIPB3-203ENST00000504841 MLH1P40692 756 aa7.73□□□□□ -1.17
NPIPB3-203ENST00000504841 AKAP17AQ02040 695 aaKnown RBP7.73□□□□□ -1.17
NPIPB3-203ENST00000504841 ADCK5Q3MIX3 580 aa7.73□□□□□ -1.17
NPIPB3-203ENST00000504841 XKR3Q5GH77 459 aa7.73□□□□□ -1.17
NPIPB3-203ENST00000504841 RNF20Q5VTR2 975 aa7.73□□□□□ -1.17
NPIPB3-203ENST00000504841 DCLRE1AQ6PJP8 1040 aa7.73□□□□□ -1.17
NPIPB3-203ENST00000504841 DHX32Q7L7V1 743 aaKnown RBP7.73□□□□□ -1.17
NPIPB3-203ENST00000504841 TAS1R1Q7RTX1 841 aa7.73□□□□□ -1.17
NPIPB3-203ENST00000504841 PDCD7Q8N8D1 485 aaKnown RBP7.73□□□□□ -1.17
NPIPB3-203ENST00000504841 CMASQ8NFW8 434 aaPredicted RBP7.73□□□□□ -1.17
NPIPB3-203ENST00000504841 PJA1Q8NG27 643 aa7.73□□□□□ -1.17
NPIPB3-203ENST00000504841 PHKBQ93100 1093 aa7.73□□□□□ -1.17
NPIPB3-203ENST00000504841 B3GALT6Q96L58 329 aa7.73□□□□□ -1.17
NPIPB3-203ENST00000504841 TRAIPQ9BWF2 469 aa7.73□□□□□ -1.17
NPIPB3-203ENST00000504841 APOL6Q9BWW8 343 aa7.73□□□□□ -1.17
NPIPB3-203ENST00000504841 SPATA6Q9NWH7 488 aaPredicted RBP7.73□□□□□ -1.17
NPIPB3-203ENST00000504841 MARCH5Q9NX47 278 aa7.73□□□□□ -1.17
NPIPB3-203ENST00000504841 VPS54Q9P1Q0 977 aa7.73□□□□□ -1.17
NPIPB3-203ENST00000504841 EPS15L1Q9UBC2 864 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms