RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 ATF7P17544 494 aaPredicted RBP5.46□□□□□ -1.54
LMNB1-208ENST00000504788 FGFR4P22455 802 aa5.46□□□□□ -1.54
LMNB1-208ENST00000504788 CCL23P55773 120 aa5.46□□□□□ -1.54
LMNB1-208ENST00000504788 FAM189BP81408 668 aa5.46□□□□□ -1.54
LMNB1-208ENST00000504788 FAM102BQ5T8I3 360 aa5.46□□□□□ -1.54
LMNB1-208ENST00000504788 TSHZ1Q6ZSZ6 1077 aa5.46□□□□□ -1.54
LMNB1-208ENST00000504788 HAUS6Q7Z4H7 955 aa5.46□□□□□ -1.54
LMNB1-208ENST00000504788 DBF4BQ8NFT6 615 aa5.46□□□□□ -1.54
LMNB1-208ENST00000504788 ZNF507Q8TCN5 953 aa5.46□□□□□ -1.54
LMNB1-208ENST00000504788 RNF166Q96A37 237 aaPredicted RBP5.46□□□□□ -1.54
LMNB1-208ENST00000504788 DRC1Q96MC2 740 aa5.46□□□□□ -1.54
LMNB1-208ENST00000504788 GSDMAQ96QA5 445 aa5.46□□□□□ -1.54
LMNB1-208ENST00000504788 PPP1R16BQ96T49 567 aa5.46□□□□□ -1.54
LMNB1-208ENST00000504788 PPP1R12CQ9BZL4 782 aa5.46□□□□□ -1.54
LMNB1-208ENST00000504788 GZF1Q9H116 711 aaPredicted RBP5.46□□□□□ -1.54
LMNB1-208ENST00000504788 KCTD10Q9H3F6 313 aa5.46□□□□□ -1.54
LMNB1-208ENST00000504788 TMEM134Q9H6X4 195 aa5.46□□□□□ -1.54
LMNB1-208ENST00000504788 RC3H2Q9HBD1 1191 aaKnown RBP5.46□□□□□ -1.54
LMNB1-208ENST00000504788 AGPAT5Q9NUQ2 364 aa5.46□□□□□ -1.54
LMNB1-208ENST00000504788 TMEM39AQ9NV64 488 aa5.46□□□□□ -1.54
LMNB1-208ENST00000504788 KIAA1468Q9P260 1216 aa5.46□□□□□ -1.54
LMNB1-208ENST00000504788 SEL1LQ9UBV2 794 aa5.46□□□□□ -1.54
LMNB1-208ENST00000504788 PADI3Q9ULW8 664 aa5.46□□□□□ -1.54
LMNB1-208ENST00000504788 GDAQ9Y2T3 454 aa5.46□□□□□ -1.54
LMNB1-208ENST00000504788 STYXL1Q9Y6J8 313 aa5.46□□□□□ -1.54
LMNB1-208ENST00000504788 ATG2AQ2TAZ0 1938 aa5.46□□□□□ -1.54
LMNB1-208ENST00000504788 PHLPP2Q6ZVD8 1323 aa5.45□□□□□ -1.54
LMNB1-208ENST00000504788 CNTNAP2Q9UHC6 1331 aa5.45□□□□□ -1.54
LMNB1-208ENST00000504788 TDRD15B5MCY1 1934 aaKnown RBP5.45□□□□□ -1.54
LMNB1-208ENST00000504788 MEIS3P2A8K0S8 358 aa5.45□□□□□ -1.54
LMNB1-208ENST00000504788 PPP1R3GB7ZBB8 358 aa5.45□□□□□ -1.54
LMNB1-208ENST00000504788 C9IYK1 514 aa5.45□□□□□ -1.54
LMNB1-208ENST00000504788 ACKR2O00590 384 aa5.45□□□□□ -1.54
LMNB1-208ENST00000504788 SLC16A4O15374 487 aa5.45□□□□□ -1.54
LMNB1-208ENST00000504788 TLR3O15455 904 aaKnown RBP5.45□□□□□ -1.54
LMNB1-208ENST00000504788 RPN1P04843 607 aaKnown RBP5.45□□□□□ -1.54
LMNB1-208ENST00000504788 SSBP05455 408 aaKnown RBP eCLIP5.45□□□□□ -1.54
LMNB1-208ENST00000504788 LINC00271P0C7V0 271 aa5.45□□□□□ -1.54
LMNB1-208ENST00000504788 SRGAP2CP0DJJ0 459 aa5.45□□□□□ -1.54
LMNB1-208ENST00000504788 MYBP10242 640 aa5.45□□□□□ -1.54
LMNB1-208ENST00000504788 GHRP10912 638 aa5.45□□□□□ -1.54
LMNB1-208ENST00000504788 SYN1P17600 705 aa5.45□□□□□ -1.54
LMNB1-208ENST00000504788 ARF4P18085 180 aaPredicted RBP5.45□□□□□ -1.54
LMNB1-208ENST00000504788 TMOD1P28289 359 aa5.45□□□□□ -1.54
LMNB1-208ENST00000504788 CD52P31358 61 aa5.45□□□□□ -1.54
LMNB1-208ENST00000504788 PMS1P54277 932 aaKnown RBP5.45□□□□□ -1.54
LMNB1-208ENST00000504788 CDC42EP1Q00587 391 aa5.45□□□□□ -1.54
LMNB1-208ENST00000504788 BFSP2Q13515 415 aa5.45□□□□□ -1.54
LMNB1-208ENST00000504788 CAMK4Q16566 473 aa5.45□□□□□ -1.54
LMNB1-208ENST00000504788 TMEM240Q5SV17 173 aa5.45□□□□□ -1.54
LMNB1-208ENST00000504788 ODR4Q5SWX8 454 aa5.45□□□□□ -1.54
LMNB1-208ENST00000504788 EEF1DP3Q658K8 133 aa5.45□□□□□ -1.54
LMNB1-208ENST00000504788 KANK3Q6NY19 840 aa5.45□□□□□ -1.54
LMNB1-208ENST00000504788 SRGAP1Q7Z6B7 1085 aa5.45□□□□□ -1.54
LMNB1-208ENST00000504788 ZNF598Q86UK7 904 aaKnown RBP5.45□□□□□ -1.54
LMNB1-208ENST00000504788 ZC3H3Q8IXZ2 948 aaKnown RBP5.45□□□□□ -1.54
LMNB1-208ENST00000504788 CEP57L1Q8IYX8 460 aa5.45□□□□□ -1.54
LMNB1-208ENST00000504788 C7orf61Q8IZ16 206 aa5.45□□□□□ -1.54
LMNB1-208ENST00000504788 USP38Q8NB14 1042 aa5.45□□□□□ -1.54
LMNB1-208ENST00000504788 GSTCDQ8NEC7 633 aa5.45□□□□□ -1.54
LMNB1-208ENST00000504788 ZSWIM2Q8NEG5 633 aa5.45□□□□□ -1.54
LMNB1-208ENST00000504788 BADQ92934 168 aa5.45□□□□□ -1.54
LMNB1-208ENST00000504788 PRIMPOLQ96LW4 560 aa5.45□□□□□ -1.54
LMNB1-208ENST00000504788 NLRP4Q96MN2 994 aa5.45□□□□□ -1.54
LMNB1-208ENST00000504788 MAP7D2Q96T17 732 aa5.45□□□□□ -1.54
LMNB1-208ENST00000504788 HTATIP2Q9BUP3 242 aa5.45□□□□□ -1.54
LMNB1-208ENST00000504788 CXCL16Q9H2A7 254 aa5.45□□□□□ -1.54
LMNB1-208ENST00000504788 RNF19AQ9NV58 838 aa5.45□□□□□ -1.54
LMNB1-208ENST00000504788 PANK4Q9NVE7 773 aa5.45□□□□□ -1.54
LMNB1-208ENST00000504788 CXXC1Q9P0U4 656 aaPredicted RBP5.45□□□□□ -1.54
LMNB1-208ENST00000504788 LARSQ9P2J5 1176 aaKnown RBP5.45□□□□□ -1.54
LMNB1-208ENST00000504788 MAN1B1Q9UKM7 699 aa5.45□□□□□ -1.54
LMNB1-208ENST00000504788 TBX20Q9UMR3 447 aa5.45□□□□□ -1.54
LMNB1-208ENST00000504788 ST3GAL5Q9UNP4 418 aa5.45□□□□□ -1.54
LMNB1-208ENST00000504788 AKT3Q9Y243 479 aa5.45□□□□□ -1.54
LMNB1-208ENST00000504788 NLRC5Q86WI3 1866 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 DENND3A2RUS2 1198 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 GOLGA6L4A6NEF3 574 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 LRRIQ4A6NIV6 560 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 ANKRD63C9JTQ0 380 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 EIF3DO15371 548 aaKnown RBP eCLIP5.44□□□□□ -1.541e-6■■□□□ 13.3
LMNB1-208ENST00000504788 KINO60870 393 aaKnown RBP5.44□□□□□ -1.54
LMNB1-208ENST00000504788 PARNO95453 639 aaKnown RBP5.44□□□□□ -1.54
LMNB1-208ENST00000504788 MBD3O95983 291 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 ADRB2P07550 413 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 GAP43P17677 238 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 RFC2P35250 354 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 DNM2P50570 870 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 WNT7BP56706 349 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 ASIC1P78348 528 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 AMPD3Q01432 767 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 PCBP1Q15365 356 aaKnown RBP eCLIP5.44□□□□□ -1.541e-18■□□□□ 8.3
LMNB1-208ENST00000504788 TPRNQ4KMQ1 711 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 FAM26FQ5R3K3 315 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 C9orf50Q5SZB4 431 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 CENPPQ6IPU0 288 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 CRELD2Q6UXH1 353 aaPredicted RBP5.44□□□□□ -1.54
LMNB1-208ENST00000504788 FAM178BQ8IXR5 827 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 SMYD4Q8IYR2 804 aaPredicted RBP5.44□□□□□ -1.54
LMNB1-208ENST00000504788 ADSSL1Q8N142 457 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms